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Gene detail [Fasta]

Species Linepithema humile
GeneLH21729
Positionscf7180001005012:136548..152925[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH21729
sequence mRNA:
>LH21729-RA
ATGCGCGATCTCGCGTTTGATCCCTTCCTCAAATCGCGCAACGTCGAAACATCCACTTCCGGTTGTTCCCGGAAGAACGG
AAAGTATCTGGACAGGTACGAGAAGGTCCACTTTCTAGGCGAGGATGGTCAACAGGCTGACGACGACGACGAGGATTCCA
GGCATCGAAAGTGGTCGGCCAGAGCACTGCACTCCGTTCCTCTTACCTATAATCATCATCAGCACAACATCGCAGAATCT
CTGCGCGACTACAACGGACTCTCGTCGGACCTTTATAAGCCGTCGAACTACGACAAGCTCGCGCTGTCGCTTCTCTCGCC
GCTGCCGAACGAGCAGGATTTTGCCATCAACGTCTGCACTCTCCTGTCGAACGAGGGCAAGCACACTCTGCGGCTCGACA
AGTATCCCCGGCTGGTGAACATCCTTCTGGCGCACGCCGGCGTCTTCGATTCGCCCGGCACACGGCAGCTCTTCATCGAG
GTGTACTCGCGTGTCCGCAACTATTCGATCAACTCCTTCTGGTCGGACGTGCTCGACTCCCAGGATGTGATAGACCTCAC
GAACGAGAGGACTTTCATGAAGAAGCCGCCCACCAGTCTGTCGACGTTCTCCAGGCGAAAGACTTTGGAGAAGGAGAAGC
AGAGCAAGCAGGGCGCCGCCACGTCGACGACGGAGAACGAGGAGTCGATAGTGCCGATCGACGTCGAGGCGGTACTTCCG
GACTGCTCGCGGCTGGATCCCCTCGCGTCGCATTCGGACGAGAGTTTGAGAGATCAGAATCAGAATTCTATCAAGTTCGA
GGAGGAGGATAAAGATCTGTTTTGCGTCGGTCGGACATTAGGCACGCAGGATCCGTACGGTCAGCGCGTGCTGCAGATCG
CGTCCATTCTGCGGAACCTTAGTTTCACGCAAGAAAATGCGACGGTATTAGGCAGGAATCGATGCTTCCTGCGATTCGTG
CTGCTGTGCGTGAGAGCGAGGTGGAGCAATCTGCATCAGCTCGGCTTCGACATATTAGGGAATATAGCGAATGAAATTAT
TCTAAAGGAGGCCGGCGAGAGGATAACGGATGTCGTACTGTCGTGCGTGGCCAAAGGAATCGAGTCTCAAGACAGGTTTA
TCGTTATATCCTGCCTGGAAGTGCTCAATAAAATCAGCCAGCAGGATAGCAACGAGGAAGTCGTGACGTTCGGCCTGGCG
GACGATGTATATGAACTTATTTGCAGATTTCTAGCCCTGAGCGACATAGCCCTTGTTAGTGTACACCTTGGAATGTTTAT
ACGCTTTAACGTCACTGGTTACGGCCCGAAGGCCTGCATTCTCATGCGAGTGGTCGAGACCGTGTCCACCGTGGCGGCGC
AGAGCACCGCGGGACAGGGCGCCGTCACCTCCGCGCCTGTCACGCCAGCTACAACGACGACGGCTGCGTCCACTCCGTCT
ACCCCGGCGACGGTCACCGCGACGCCGGCAGGACCCGCGAGTCCGGCGACCTCTCGACCCACAACTCCCGCTGCAACTTC
AACCAAGTCGACAACGCACAAAGCAGTAGACACGGCCAATGCGATCCAGCAGCAGAGCACGCATCAGCAAATCATTCAGG
AGAACGAGCAGTTCGCTTTGGGCTGGGTGAAAGCGACTTTCGAGCTCGCGCCCGGCGCGCGCATCGAACAAGAAGAACTG
TACAAAAAGTATCTCGGCTGCTGCACGAAAATTGGCAGACGAGGCGTCATAGCGCCGCTGCACTTTCCAAGATGCGTCAG
ATCCGTTTTCGGCAATATCGTGGGGCCGAATCCGTTGAAGGGCGAAAATACCGGCACCCAGTATTACGAAGGCATCCGAG
TACGGGCGACACCCGCGCCGATCACTTATCCGAGCCAAACCACCGCTGCGGTCGCGACTAATACACCGCTGTTGCAGGCG
GTCAACGCTACTCCAGTAAAGGTGCTTCCCGTTCAACAGCGTACAGTCAAGAATATAAGTCCCGCACCCGATAGCACGGC
CGCCCCCCAGGTCGATACTCCCGCCGCGTCGTCCGGGACGCAAACCATCCCCACTCCCGCGTCTCCCATCCTCAAGGCCC
AGCTGTCCGCCCCGCCGAAACCCCCGTCCAGCAACACCTCGAGCCAGTCCCAAAATCCAGTGACCAAGGTTGATTCTAAA
AGTCAGGTATCAGTATCGCATCCGCATCTGAGCCAAGCGCTGCTAGCGAGCGGCTCCCAAACGCCGCAGCAGCAACAACA
GCCGCAGCAGCATCAGCAGCCGCAGCAACAGTCGCAAAGTGTCCAGGTAGTCGCTAAGGAAGATAATCGAAGTGGCACTA
CGTCGAGTTCCATAATAAAAAGCCTATTGGCTACTAAGGTAACAGTCAGCAGCGACTGCATGCCCAGTGCTGCTGCGACT
TGTGTGTCTACCCCTACTGCCTGCGTAACAAACACTACTGCTAGCATCGCATCCAGCATCAGTGCCAACCAGCTAATAAC
CAGCAACCAGGTCGCCCAGCGTCAGCAACAGCAGAGGTTACTGCAACAGCAGATGACGGGTGTGATGCAGCCAGCCGCGC
CCGCGGCCGTCCCGGCCACGATACTCCCAAAGACTTCCACGAATGCTAAGCAGAAACCGGTGATCACGCCCATTCCTGCC
AAGAAGATACAGAGGCTCAACGGGGCCAAGTTTCTTGTGACTAATAATTGCGAGAAGACTGAAATAAACGATAACGACAA
CGCCAACCAAATCTCCACGTCCACCATCACTACGATGGTAGTGAATTCGACTGAAAACCACATATCTTCCTCTCTGAAAG
TCTGTCGTCCGCCCTTGACGACGGCGGCCGCCGCCGCAACGCCGAACAGAACGAATCAACGCACGACGTGCACTTCCATA
GCCGAGGACTCGGACTCGACGAACAACTCCCTGGCGTCGAGCAGCGGCATCGGCGGCAGCAGGGATTGCTCCGGCGCCGG
CGTCGAGGAGGAGAATATGCTGACGAGCTTCGAGGGCATCCTGCTGAACGGCGCGCCGAGCAATAATATGGACAATCGAC
GCGCAGGAGGACGGCTCGTCGACAAAGAGCCCATCCTGAACGGCGTCCTCAGCAAGAACTCGATCAACGAGAAGGAAATG
GACCTGGTGGAGAATCACATCAAGAAGGTGTTAAAGGAATCTCCGAGCGAGCTGAAGATAAAATCCGAGGTGGAGGGCGG
CATACAGAACGAGGTGTCCGAGGACACTCTGATCGAGGCGCCGCGGGGGATCAAGCGATCGGCCAGCGAGTCGGACGAGC
TGGAGATCAAGAAGCCCAAGTATTCCAACGGCACGATATCGCCGGACCCGGCGGTCGACTCGACCACCGCCGAGTCCACG
GTCTCGAGTATAAAGTCTGAGGACGACGACAAGGACAGCGAGAAGGCGACTGTCTCCTCCACCGCGGCGAATCTTTACGC
CGCCCTGGCCGCGGATTGTATAGAAGACGAGACGGACCTCGACGAGCACGTGAGCGTCAACAAGGACGCTATAAAGGAGG
AAACGACGACGACGGCGACAGAGGCACCGCCGGTTCTCGTAAAGGAGGAGCCCCCGACTCTGCACATCAAGGAGGAGCCT
CACATATTCATCAATCAGATCACGCAGATGTCGCAGCCGCAGCCGCCGCCGTTGCAGCCGCAGCAACCGCAGCAGCAACA
GCAGCAGCAGCAGCAGCAGCAGCAGCTGATCGTGACGACGCCCAGACAGATCGTCGTCCAGCAGACCATCGCGTCCAACA
ACCAAGTGATCATTCCGACGACGTCGGTGAAGGGCAGAGCGCCGCCGTCTCAGCCGCAGGTGCTGCTGCAGCAGAGCGCG
GGCGGACAGCTGCAGTACGTGGTGTCGGGCGGCGTGCCCGGTCAGAACTACGTCCTGGCGCAGCCGCAGACGGCACTGGT
GCAGGGACAGGCGCAGACGGTGCTCGTGGCGCAGACGACGCAGCAGCAGGGAACCGGCACGAAGACGATCATCATACTGC
AGCCGCAGGCCGCGACGCAGCCGACGCCGCAGAAGGTCGTGGCGATGACGCCGCAGGGGCAGCAGGTGGTGGTGACGCAG
GTGCCGCGGCCGATCCTGCAGAGCCCGGCGCTCGGCAACATCCCGCCGCCGCTTGTGCCGACGTCCGCCGCTATTCCGCA
GACCTCGATCATAGTCAACAGCTCGGTGGCGCAGGCCAATCCGAACACGGTGACCGTCACGATCCCGGCGATGGCCCAGC
AAACCCCGGTGTCCACCAGCGTGCCGTCCAGGGTGATGACGCCCACCCCGGCGTCCACGCCGCCGCCCACGAGACCCACG
ACGCCGCATCAGGCGGCGGCCACTCACGGCGTGTCCGCCGTTAAACCGCCGATCGCCACGAAGGTCGTTAAAACCGTCAG
CTCGTCGACTTCCACCGAACCGGAGTCGAAGCCCTCCACGAGTCAGCAGCAGCAGCAGCAGTCGCCGCAGCCGTCGTCGC
AGCCGTCGTCGCAGGAGAGCAAAACCATCACGATCAAAATCGATCCCAACGCTTATCTGTGCGAGTGGCGCGGCTGTCTC
AGACAATTTAAAACACCACACGAGGTCTACCTTCACGTTTGCGAGGCTCACTGTCCGACCGGTGGCGAGGAGATACTCTG
TCTATGGGCGAGCTGCGACGCACTCAAGAGGCGCAGATTCTCGCTGATGACGCACCTCTACGACAGGCACTGCAATGCGG
ACACGATGTCGATGAGGAGGAAACAGTTGACGGTGACTGGAAAAACCGAGGTCTCCACGTCCACACCCCCGACTCCGCAT
CATCCCGGATACGCACCGAATGCCGCATTCCACGCTATCAAACGGCACGCTCTGGAGTTCGTTAATCCCAAGGAGCTGAT
GCAGCAGAGGCCGACCAAGCCCGCTGCAGCCACTTCTAGCTCTTCTTCCCCCAGACCCGGGCAAAATCCTCCACCAGAAC
AGGATGACAACGAAGGTCCGGTGACCAAAAGTATTCGCCTAACGGCAGCTCTCATTCTTAGGAACCTAGTCATATATTCA
ACACATGGTAGAAGGCACCTTAGAGCGTACGAGCCACACTTGGCGGGCGTGGCGTTGAGCAATGTCGAATCATCAAGAAC
GATCGCACAAGTCCTGTATGACATGAACGACCAGAGTAGCAGTAGCCATCATAGGTGACCTCTTGAATCAGGCCTCTAAA
AGCTCTCCTCTAACCA
PEP:
>LH21729-PA
MRDLAFDPFLKSRNVETSTSGCSRKNGKYLDRYEKVHFLGEDGQQADDDDEDSRHRKWSARALHSVPLTYNHHQHNIAES
LRDYNGLSSDLYKPSNYDKLALSLLSPLPNEQDFAINVCTLLSNEGKHTLRLDKYPRLVNILLAHAGVFDSPGTRQLFIE
VYSRVRNYSINSFWSDVLDSQDVIDLTNERTFMKKPPTSLSTFSRRKTLEKEKQSKQGAATSTTENEESIVPIDVEAVLP
DCSRLDPLASHSDESLRDQNQNSIKFEEEDKDLFCVGRTLGTQDPYGQRVLQIASILRNLSFTQENATVLGRNRCFLRFV
LLCVRARWSNLHQLGFDILGNIANEIILKEAGERITDVVLSCVAKGIESQDRFIVISCLEVLNKISQQDSNEEVVTFGLA
DDVYELICRFLALSDIALVSVHLGMFIRFNVTGYGPKACILMRVVETVSTVAAQSTAGQGAVTSAPVTPATTTTAASTPS
TPATVTATPAGPASPATSRPTTPAATSTKSTTHKAVDTANAIQQQSTHQQIIQENEQFALGWVKATFELAPGARIEQEEL
YKKYLGCCTKIGRRGVIAPLHFPRCVRSVFGNIVGPNPLKGENTGTQYYEGIRVRATPAPITYPSQTTAAVATNTPLLQA
VNATPVKVLPVQQRTVKNISPAPDSTAAPQVDTPAASSGTQTIPTPASPILKAQLSAPPKPPSSNTSSQSQNPVTKVDSK
SQVSVSHPHLSQALLASGSQTPQQQQQPQQHQQPQQQSQSVQVVAKEDNRSGTTSSSIIKSLLATKVTVSSDCMPSAAAT
CVSTPTACVTNTTASIASSISANQLITSNQVAQRQQQQRLLQQQMTGVMQPAAPAAVPATILPKTSTNAKQKPVITPIPA
KKIQRLNGAKFLVTNNCEKTEINDNDNANQISTSTITTMVVNSTENHISSSLKVCRPPLTTAAAAATPNRTNQRTTCTSI
AEDSDSTNNSLASSSGIGGSRDCSGAGVEEENMLTSFEGILLNGAPSNNMDNRRAGGRLVDKEPILNGVLSKNSINEKEM
DLVENHIKKVLKESPSELKIKSEVEGGIQNEVSEDTLIEAPRGIKRSASESDELEIKKPKYSNGTISPDPAVDSTTAEST
VSSIKSEDDDKDSEKATVSSTAANLYAALAADCIEDETDLDEHVSVNKDAIKEETTTTATEAPPVLVKEEPPTLHIKEEP
HIFINQITQMSQPQPPPLQPQQPQQQQQQQQQQQQLIVTTPRQIVVQQTIASNNQVIIPTTSVKGRAPPSQPQVLLQQSA
GGQLQYVVSGGVPGQNYVLAQPQTALVQGQAQTVLVAQTTQQQGTGTKTIIILQPQAATQPTPQKVVAMTPQGQQVVVTQ
VPRPILQSPALGNIPPPLVPTSAAIPQTSIIVNSSVAQANPNTVTVTIPAMAQQTPVSTSVPSRVMTPTPASTPPPTRPT
TPHQAAATHGVSAVKPPIATKVVKTVSSSTSTEPESKPSTSQQQQQQSPQPSSQPSSQESKTITIKIDPNAYLCEWRGCL
RQFKTPHEVYLHVCEAHCPTGGEEILCLWASCDALKRRRFSLMTHLYDRHCNADTMSMRRKQLTVTGKTEVSTSTPPTPH
HPGYAPNAAFHAIKRHALEFVNPKELMQQRPTKPAAATSSSSSPRPGQNPPPEQDDNEGPVTKSIRLTAALILRNLVIYS
THGRRHLRAYEPHLAGVALSNVESSRTIAQVLYDMNDQSSSSHHR
Swiss-ProtAT-rich interactive domain-containing protein 2
KEGG     K11765     
Gene3DG3DSA:1.10.10.10     
ProSiteProfilesPS51526  RFX_DBD; RFX-type winged-helix DNA-binding domain profile.     
ProSitePatternsPS00028  ZINC_FINGER_C2H2_1; Zinc finger C2H2 type domain signature.     

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