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Gene detail [Fasta]

Species Linepithema humile
GeneLH17494
Positionscf7180001004929:726283..735321[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17494
sequence mRNA:
>LH17494-RA
ATGCGCGTCAAATTAGTCCTGCATTTAGGCTATCTCATGCGAATTATCATTGCAATTAATTTTCCGGGCCATTATAACTT
TAGAAAACATTCGAGAAACTGCTTGAACGCTAGAATTGCTTTGAATGCCGAAATCTTAGCTGTTTGCCCAAAAATCTACA
AAACTCCGCGACATCAAGCCCGCACACAGTCTTGCAATCATCGCTTCGGCCTGCACGCAATTCGAGCATCCCGCAATGTA
AAAGCTCAAGCTTTGTGCATTTCGGAAGTTCATCGCGCCATAATTCAAGATGGGCAGCAAATGGTGCCAACCCTCTGCGA
GCTCGCGGCACGATGTGTCGCGTCTCATATCCCCTTCGAATTGGTGGAACACTTCTATCCGCCCGTGCCGGAGCAGCTAC
AGCTGAGAATAGCTTTTTGGAGCTTTCCAGATAATGAGGAGGACATACGACTTTACTCGTGCCTCGCAAACGGTAGTGCT
GATGAATTTGTCCGTGGCGAACACCTCTATCGCGCCAAGACCGTCAAGGAGCCTCTGCAAATCGGATTTCATCTGAGCGC
CAGTGTAAACCCGCAAACGAACGGCGTCAGAGCACAGTTCAACGTTGCCGTAACCTTTGACCGTCGCAAAATCACATCAT
GTAACTGCACTTGCTCTTCGACGGCTTATTGGTGCGCACATGTAGTGGCCGTTTGCCTACACAGGATACACATGCCAACG
CAAGTATGCCTGAGAGCGCCGGTTAGTGAATCCCTGTCGCGATTGCACCGCGAGCAACTGCAAAAGTTCGCTCAATACCT
CATCAGTGAATTGCCGCAACAGATCTTGCCCACTGCTCAGCGACTCCTGGACGAGCTGCTCTCAACTCAACCGAGTACCA
TCAATTCTTACTGCGGTGCTCCGGATCCGACCGCTGGAGCTTCCGCTCACGATCAGACTTCTTGGTACTTAGATGAGAAG
ACGTTGCATGACAACATCAAGAAGATCCTTATCAAGTTCTGCGTTCCGGCGCCCATAGTCTTTAGCGATGTTAATTACCT
GAGCACCACCGCGCCTCCGGCCGCCTCTGAATGGGCGTCGCTGCTGCGACCGTTGAGAGGTCGCGAGCCGGAGGGTATGT
GGAATCTCCTCTCCATCGTGCGCGAGATGTTCAAGAGGAACGACCGCAATGCCATACCCCTGCTGGAGATCATCACGGAG
GAGTGTATGGCGTGCGAACAGATCCTCGTCTGGTGGTTCAATACCAAGGTCGCGTTACTCAATGGCACCGGATACGGCAG
CAAGCACAACATGAACAGCAACGTTCACGCCTCGCAGCACGCGTGCTCGTCTCTGTGCGACGAGATCGTCGTTCTCTGGC
GACTGGCCGCGCTCAACCCCGGCCTCTCGCCGTCTGAGCGCGAGATGTTGCACGCTCAATTTATAGCTTGGCACTTAAAG
ATCATAGACAAGGTCGCCAAATTCCGTGGCAGCTCTGTATCGCACAACTCGCACAACAGAAGTAACAGTTCGCAAAAGGA
TTCCTTGAAACATGATCTCGCAGTCTTTACAGGATTCAAATCGGCGCTCGAGGCTTGTTATCTTGATTGGGACGAATACG
TTTTGCCGGGGATCACGTATACCGCTGAAAACAATCCTATGTACCATTGTCCCTTTACGTGCTTTCGGCATGCCGGCGAC
ACGAGAACGGAGGTTAATCAGGTAAATTCGAGTTCGGCGGTGCTGAATTATCAGCCGCCCATCTCGCATCATCACGGTCG
ACGGCCGTTGAACGTCAGCCTCGTCGAGTTCAGTTATTTGGACAGACGGCGGCTGAATCCGCGCGAATTCCCACTGTGTT
CGAGAAGCGGCGGCGGCGACGGAAATCGCAGTAGCGTCAGCTCCGAAGGTTTCTGCGAGAACGACACCGACATTCCGGAT
ATATCTGAGTCTCAGGTTGTTCTGAGGCAAGGTTGTGCTCAACTAAATAATTGCGGCGATACAGATTCGCAGGTCATTAT
TCTCTTATTTCACGATAGTGACGTTAATACCATTGTTTACACTTCTCACAATTATGTTGTATTATTTCAGGAAGGGGCCG
GTAGTGAGTCATCTTCCAACAGTAACGTAAGCATGAAGAACGCTCAAGGTTCGGACAAGCATCGCTCAAATGCGTCGTCC
GAGACACATAGTGATACTAGTGATAGTAGTAATAATAAAGCTGCCTGCGAGAACGCAAAGTGTAGCAGGACAAAAACCGC
GGAGTGTCGTGACAAATCGCACGCGGTTGTGCCGAAAGGCGCAAAGAACGAACATGAATCCGATCAGGAAAAGGAAGCCG
GGAGGCCGTTCAAGGACGAGAGCTCCTCGTCTAGTAGTGACATTCCATCCGGTGACGAATATAACGTTTATTATTACGAC
CCGAAGACTGTGACGAACAATAGCGGCCTGTCGAGTAAATATGTTAAAAGCAATACGCATGCCGCCAGCACTCCGGACGC
CAGTATAGTTCTGAATAACTTGAAGAAGACGGAAGACCCATGGGACATTCTGTTCGCGCGGGCGGAGGGGCTTTACGCTC
ACGGCCACACGAAAGAAGCCTGTATCATCGGAGTACAGTTGGCCGAGGAACTCTTGGCTAATCCTCCTGATCTTATAATT
GAGGGCCCGCTATTACCGGTGAAAAATAAACGGAAAAGGCAACACGTGAATCCAGCGTCTCATCAAGTGACGTGTCTCGC
ATCGGCGACTTTAGCAAAGTGCGGATTTCTGTGCACGGTACTTGCTGAAAATCCGGAATATCACAATTTGGCGTTTCGCG
TGGGTCTGTTTGGTTTAGAGATGGCCAGACCACCGGCCAATACAAAACCTTTAGAGGTAAAATTCAGTATAACAGCGAAG
CGAATTTACGTCATTTGTACAAAATTGATGGTCAAGCTTGCTCATCAGGAAAGCGAATTAGTAGGATTACTGAAGAGAAT
TCCTTTGGGACCGACAGAATTAGCTATGATAAAACAAAGAGCTGAACAACTGAGAGACGGAGTTATGAGATCGAGAGGAC
ATGCGCTCTTGCCCATCATGTTAGCCAGCTTCATATATGACGCACTTGATGTACCAAGGAATAAAAATGTGCAATGTTTC
GCAGGAGTGAAATTGCCGGCGGAAATTGATCCGAATCTCGGATTTGACGCCGCTGTGGCTGTTTTGGGATTAAAAGCCAA
TGTGAGCGAGGCAGATCATCCTCTTCTATGCGAAGGAACTCGCAGGCAGAGAGGAGAATTGGCTATTACTTTGCTCGTGC
ATTACAAAGACGATCCTACGAAATTGGCTAGAATCATGGAAAAGTTATTGGATCGGGATGTTCATCAACTCAACAAATCA
AACTCACCTATCCTCAGCAGTTATTACACTTCAAATCCTCCTACGAAGAGTGAAATGGCACGATTTGTCCACGATGAAGA
ATGCTCGTCGTCTCTCACCGGGACAGACAATGGCGGAAATTGTGATAACATCATTGGCGCTAGTAGTAGACCTCACAGCA
GTACGAGCGCGGAACTCGAGAATAGCATCAGCGCGCTAACCATTCAACCGCAGATTGTTCAACCATCTGTGCCTATTAGA
ACTAAAGAAACACGGCTATACCCATCAATTCCTAATCAGCCATCAGAAGCAAGCGCGCACTTCATGTGCGAATTAGCGAA
AACCGTATTATCGAAGGCCGGTGGCTCCAGCTCAACGTCATTATTCACTCAACCATCCACCAGTCAAAATCATCATGGTC
CGCATAGAGCGCTTCACATGTGCGCCTTTCAGCTTGGGTTGTACGCCCTTGGTCTTCATAATTGCGTCAGTCCGAATTGG
CTCAGTCGTACGTACTCCAGCCACGTGTCTTGGATAACCGGCCAGGCAATGGAAATCGGAGCTCCAGCCATCTGGTTTCT
TATTGACACTTGGGAAGGTCACTTGACGCCACCGGAGGCCGTCAGTATAGCCGACAAATCCTCGAGGGGCAGTGATCCGA
ATATGGTCAGAGCGGCGGCCGAGCTTGCTTTGTCCTGCCTGCCGCACGCGCACGCGCTCAATCCTAATGAAATCCAGAGA
GCTATATCGCAATGTAAGGAACAGAGCGAAGCCATGTTGGAAAAAGCTTGTATTACAGTTGAAAACACCGCGAAGGGTGG
CGGTGTTTATCCAGAAGTGCTCTTCCAGGTGGCAAAGTATTGGTACGAGTTATATCTTCGGCAAACTCCTGGTGCAGATC
AACAGGATGAGATTCCTCACGATCCTTTGCAATTGGATCTTAATGGAGTGCTATTAGTCGAACCGGGACCTTCCGTAGAC
CTGTCGAATACGCAGATGATGCCTGGGCCGACGCAGACGGTCGTTGTTACCAGCACGCAACCACCTCCTCAGCCCTACAC
TCATCCAACGATTACGACCCTGGCGCCTTTAGGAGTCGGCATGCCGTACGCCGTGGGCCCGTACAGTTTTGTACATCCTC
ATCATTCCATCGCAACGTTTAGCGGTCCGATGCCCTCGCACAGAGTCACTTTACCGCCCGCACCGCACATGCAAATGTAT
CACCCATTTCCACATCACCCCGGACACCCTCAACATCCGCCTCATCCGCATCACTCGTCTCCAGTCGCGCCACCTCCCCC
AGGACCATATTACACGCCGCCACCGACGCCAGGAACTCGACACTTGTATACGATGCAACAGCCGATGCCGGTTCAAGCAG
GAGTAGCAGGTCCTCTTCCCGGACAAAATAATATGCCTGGACCTACACTGGTCCAGACACAACCTATAATATCGACTGTG
AGAGCTCAACCTCAGGTTCATAGACAAAGTCAGACATTTAGTCAACAGCAATTGCGAACTCTCGTTTCTGCATATCGCGT
GGGTATGCTAGCGTTGGAAACTCTGGCTCGCAGAGTGCACGACGATCGGCCTCAAGCCAAGTATGCGCGGAATCCGCCCT
ACGGAGAGGATGTTAAATTTTTGCTCAGAGTTGCGAAGCGGCTTGGCACGCAGTACATACATCAGCTCTGCATCTGTGCT
GTGAACAGCATCGTCAGTCCCTTTGTCCTTCATCATGTTGCTCTGGAAGGGGCTCAGTATCTTGCAAGAAACAATCCGGC
ACTCATTGTGCAACACCTGAGATCTGCCTTGTTGGCTCCGCTGGTACACAAGTGCCAACAGATGTACATTCAGTGTATGC
ATCAAAAGCTGTATCACTTAACAGCTGGCGATTACGAGGAATTTGCCAGTATTGTTTGCGCTGCGAGAGCTGCCTTCCAA
ATCAATCCAGAAGGAAACGCTCATTTCAAGGAGTGGCTGCAGTCGATTAAAAGGTACATTCAAGCGCAAACACTCTACAA
CAAATGGACGGAATTAGCGGAGCCAGGCGTGACGTGGCTCACCTCCCTACCCCATCATCCTCAACCACCCCCGCCGCCTC
CACCACCGACAACGACAACTCTCGTACTACAGCATCAACATCCCTGTCACCCCCATCCACAGAGCGTCGTATGCGTTCAC
GGGCTGGCTGCAGTCAACAAGCTCGCTTGGGACAAGATCTCCATACCATGCATCATTGAGGAGCCGGCGGTGCATCAGCT
ACCGCCGCCGCCGCCGCCGCCGCCGCCTCATCAACACCAGATGATTGCCGGTCTACCGGGACCGTCCGTGTGGCAGGATC
CGACCGACAGCCGTGGCACTCAGGGGATCAATACCAGAGATGAGCGAGATTTATCTCAAGTTTAG
PEP:
>LH17494-PA
MRVKLVLHLGYLMRIIIAINFPGHYNFRKHSRNCLNARIALNAEILAVCPKIYKTPRHQARTQSCNHRFGLHAIRASRNV
KAQALCISEVHRAIIQDGQQMVPTLCELAARCVASHIPFELVEHFYPPVPEQLQLRIAFWSFPDNEEDIRLYSCLANGSA
DEFVRGEHLYRAKTVKEPLQIGFHLSASVNPQTNGVRAQFNVAVTFDRRKITSCNCTCSSTAYWCAHVVAVCLHRIHMPT
QVCLRAPVSESLSRLHREQLQKFAQYLISELPQQILPTAQRLLDELLSTQPSTINSYCGAPDPTAGASAHDQTSWYLDEK
TLHDNIKKILIKFCVPAPIVFSDVNYLSTTAPPAASEWASLLRPLRGREPEGMWNLLSIVREMFKRNDRNAIPLLEIITE
ECMACEQILVWWFNTKVALLNGTGYGSKHNMNSNVHASQHACSSLCDEIVVLWRLAALNPGLSPSEREMLHAQFIAWHLK
IIDKVAKFRGSSVSHNSHNRSNSSQKDSLKHDLAVFTGFKSALEACYLDWDEYVLPGITYTAENNPMYHCPFTCFRHAGD
TRTEVNQVNSSSAVLNYQPPISHHHGRRPLNVSLVEFSYLDRRRLNPREFPLCSRSGGGDGNRSSVSSEGFCENDTDIPD
ISESQVVLRQGCAQLNNCGDTDSQVIILLFHDSDVNTIVYTSHNYVVLFQEGAGSESSSNSNVSMKNAQGSDKHRSNASS
ETHSDTSDSSNNKAACENAKCSRTKTAECRDKSHAVVPKGAKNEHESDQEKEAGRPFKDESSSSSSDIPSGDEYNVYYYD
PKTVTNNSGLSSKYVKSNTHAASTPDASIVLNNLKKTEDPWDILFARAEGLYAHGHTKEACIIGVQLAEELLANPPDLII
EGPLLPVKNKRKRQHVNPASHQVTCLASATLAKCGFLCTVLAENPEYHNLAFRVGLFGLEMARPPANTKPLEVKFSITAK
RIYVICTKLMVKLAHQESELVGLLKRIPLGPTELAMIKQRAEQLRDGVMRSRGHALLPIMLASFIYDALDVPRNKNVQCF
AGVKLPAEIDPNLGFDAAVAVLGLKANVSEADHPLLCEGTRRQRGELAITLLVHYKDDPTKLARIMEKLLDRDVHQLNKS
NSPILSSYYTSNPPTKSEMARFVHDEECSSSLTGTDNGGNCDNIIGASSRPHSSTSAELENSISALTIQPQIVQPSVPIR
TKETRLYPSIPNQPSEASAHFMCELAKTVLSKAGGSSSTSLFTQPSTSQNHHGPHRALHMCAFQLGLYALGLHNCVSPNW
LSRTYSSHVSWITGQAMEIGAPAIWFLIDTWEGHLTPPEAVSIADKSSRGSDPNMVRAAAELALSCLPHAHALNPNEIQR
AISQCKEQSEAMLEKACITVENTAKGGGVYPEVLFQVAKYWYELYLRQTPGADQQDEIPHDPLQLDLNGVLLVEPGPSVD
LSNTQMMPGPTQTVVVTSTQPPPQPYTHPTITTLAPLGVGMPYAVGPYSFVHPHHSIATFSGPMPSHRVTLPPAPHMQMY
HPFPHHPGHPQHPPHPHHSSPVAPPPPGPYYTPPPTPGTRHLYTMQQPMPVQAGVAGPLPGQNNMPGPTLVQTQPIISTV
RAQPQVHRQSQTFSQQQLRTLVSAYRVGMLALETLARRVHDDRPQAKYARNPPYGEDVKFLLRVAKRLGTQYIHQLCICA
VNSIVSPFVLHHVALEGAQYLARNNPALIVQHLRSALLAPLVHKCQQMYIQCMHQKLYHLTAGDYEEFASIVCAARAAFQ
INPEGNAHFKEWLQSIKRYIQAQTLYNKWTELAEPGVTWLTSLPHHPQPPPPPPPPTTTTLVLQHQHPCHPHPQSVVCVH
GLAAVNKLAWDKISIPCIIEEPAVHQLPPPPPPPPPHQHQMIAGLPGPSVWQDPTDSRGTQGINTRDERDLSQV
Swiss-ProtZinc finger SWIM domain-containing protein 8
ProSiteProfilesPS50966  ZF_SWIM; Zinc finger SWIM-type profile.     

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