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Gene detail [Fasta]

Species Linepithema humile
GeneLH12737
Positionscf7180001004634:117961..120905[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12737
sequence mRNA: 
>LH12737-RA
ATGGATTTCTTGGAGTATCCAGACATTTTCGCTGAGGTTAAGGGTGCTATGACACCAGGCAGATTAAAGTTGACCGATCA
GCATTTAATCTTCAAGAATCAGAAGACTGGAAAAGTGGAGCAAATTTCTGCCTCTGATATGGAAATGGTAAACTACCAAA
AGTTTATTGGCACTTGGGGTTTGCGTATCTTTTTAAAGAATGGCACTCTGCATCGCTTCAAGGGCTTTAAAGAAGCCGAT
CAAGAAAAGATTGCTAAATTCTTCACTGTCAATTATAAAAAGGATATGTTGGAAAAAGAACTGAGTTTAAAAGGTTGGAA
TTGGGGTACTGCAAAGTTTACAGGATCTGTCTTAAGCTTTGATGTAAGTCATCACACTGCTTTTGAGATACCTTTATATG
ACGTGTCGCAGTGTACTACAGGAAAAAACGAAGTTACCTTGGAATTTCATCAGAATGATGATGCACCAGTCAGTTTATTG
GAGATGAGGTTTCATATTCCTGGTGGCGACAGTGCAGATTCGGATCCTGTTGATGCATTTCATCAGCAGGTGATGGAGAA
GGCATCTGTAATCAGTGTGAGCGGTGATGCAATTGCCATATTCAGGGAGATTTATTGTCTAACACCGCGCGGTCGCTATG
ACATAAAAATTTTTCAGTCCTTTTTTCAATTACACGGCAAAACCTTCGATTACAAAATTCCCATGTCAACCGTCCTGAGA
CTCTTTCTACTGCCGCACAAAGATAATCGGCAAATGTACTTTGTTGTGAGCCTGGATCCTCCCATAAAACAAGGTCAAAC
ACGATATCATTATCTAGTACTCCTATTTAATCAAGAGGAAGAAACTTCCATAGAGCTACCTTTCACAGAAAAAGAGCTAA
AGGAAAAGTATGAAGACAAATTGACTAAAGAATTAACAGGACCAACATACGAAGTGCTCGGCAAGGTGATGAAAGTAATT
ATTAATCGAAAATTGACCGGACCCGGACATTTCACCGGTCATACCGGGGCACCCGCGATTAACTGCTCCTTCAAAGCTGC
AGCGGGATTCCTGTATCCGCTCGAACGAGGTTTCATTTATGTACACAAACCTCCGATACATATTCGCTTCGAGGAAATAG
CCTCGGTGAACTTTGCGCGCGGCGGCGGATCTACAAGATCCTTCGATTTCGAGATCGAACTTCTGAGCGGCGTGGTGCAT
ACATTCAGCAGCATTGAGAAGGAGGAGTACGGCAAACTGTTTGATTTCATCACTGCAAAGAAGCTTCGCGTCAAGAATCG
CGGCAAGAGCGACAAGCTCACTTACGACGAAGACTTTGGTGACAGCGATCAAGAAGACGAACCGGATGCTTACTTGGCGC
GAGTTAAGGCGGAAGCGGAGGAGCGTGACGGTGTGGAGAATCAAGATTCCGAGGAAGACTCGACCGACGAGGACTTCAAT
CCAAATCAAGATGAAAGCGACGTTGCGGAGGAGTACGACAGCAATCCCAACAGTTCCGAAAGCGAAGAAGACTCAGACGC
ATCTGAGGCTAGTAACAAAAAAAAGAAAAAGGAGAAGAAGGAAAAAAAACCCAAATCGGCGAAAACGGTGTCAGAAAAGC
CGCGAAAACGAAGGAAACCGAAGAAGGAGAAAGATGCGAATAAGCCGAAGAGGCCGCCAACGGCGTTTATGCTGTGGCTT
AACAATGCGCGCGAGAGTATCAAGGCCGAGAATCCTGGAATAGCTGTGACAGAAATCGCGAAGAAGGGTGGAGAAATGTG
GCGAGAACTCAAGGATAAGTCCGAATGGGAAGCAAAGGCAGTTAAGGCTAAAAAAGAGTATGCGGCGTCGATGAAAGAAT
ATGAAGCGAGCGGTGGCGGTAAATCTAAAGAGAAGGAAAAGACGGAGAAAAAGAAGGAGGTGAAGAAGGAGACGAAGAAG
GAGGTGAAGAAGGAGACGAAGAAGGAATCACCTGGCAAGTTAATGAGTGGCACTTCTTTCAAGAGTAAAGAGTATATCAG
TGATGACGACAGTAGCAGCGATGAGAGTAAGAAGTCTGAAAAAAAGTCGCCCGACGAAAATGAGGAAAAGGAGGAAAAGG
AGAAAAAGAAGAAAAATGAGAAACGAGCTGCAAAGGATACCGGAAAGAAAGTAGTGAAGAAGCGTAAACAAGATCAGTCG
GATGATGGAGAAAGCGATACGGAAGAACCCACGGAGAGCACTCCGCCGTCGTCCGACGCAGATTCTAAAGACAGTGATTA
A
PEP: 
>LH12737-PA
MDFLEYPDIFAEVKGAMTPGRLKLTDQHLIFKNQKTGKVEQISASDMEMVNYQKFIGTWGLRIFLKNGTLHRFKGFKEAD
QEKIAKFFTVNYKKDMLEKELSLKGWNWGTAKFTGSVLSFDVSHHTAFEIPLYDVSQCTTGKNEVTLEFHQNDDAPVSLL
EMRFHIPGGDSADSDPVDAFHQQVMEKASVISVSGDAIAIFREIYCLTPRGRYDIKIFQSFFQLHGKTFDYKIPMSTVLR
LFLLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFTEKELKEKYEDKLTKELTGPTYEVLGKVMKVI
INRKLTGPGHFTGHTGAPAINCSFKAAAGFLYPLERGFIYVHKPPIHIRFEEIASVNFARGGGSTRSFDFEIELLSGVVH
TFSSIEKEEYGKLFDFITAKKLRVKNRGKSDKLTYDEDFGDSDQEDEPDAYLARVKAEAEERDGVENQDSEEDSTDEDFN
PNQDESDVAEEYDSNPNSSESEEDSDASEASNKKKKKEKKEKKPKSAKTVSEKPRKRRKPKKEKDANKPKRPPTAFMLWL
NNARESIKAENPGIAVTEIAKKGGEMWRELKDKSEWEAKAVKAKKEYAASMKEYEASGGGKSKEKEKTEKKKEVKKETKK
EVKKETKKESPGKLMSGTSFKSKEYISDDDSSSDESKKSEKKSPDENEEKEEKEKKKKNEKRAAKDTGKKVVKKRKQDQS
DDGESDTEEPTESTPPSSDADSKDSD
Swiss-ProtFACT complex subunit Ssrp1
KEGG     K09272     
SUPERFAMILYSSF47095  HMG-box superfamily     
Gene3DG3DSA:2.30.29.30     
PfamPF03531  SSrecog; Structure-specific recognition protein (SSRP1)     
SMARTSM00398     
ProSiteProfilesPS50118  HMG_BOX_2; HMG boxes A and B DNA-binding domains profile.     
PRINTSPR00887     
CoilsCoil
OrthologiGroup-00746    FACT complex subunit Ssrp1      

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