Warning! We strongly recommend Internet Explorer (9.0 and later) and Google Chrome for better display.

Gene detail [Fasta]

Species Linepithema humile
GeneLH12729
Positionscf7180001004634:74732..84667[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12729
sequence mRNA:
>LH12729-RA
ATGAATCTCGAGGTGGAATTGATCGCGGGGGTCATTAAAGGCGGTTTACCTCCTGCACATCTGCCAGCACCACGGCTGAT
CAAGATATTCATCGCTGGCGAGAGAGATGATTTTTCGGAGGAACGCAAACAGCTGTTGGAAATGGTCGGTCCAGAGCTGC
AATCAATCTACGATGATATGGGCATTGAGGTGCTGTTGGTGGACATGCAGTACGGTGCCAGCGTTAACCCGGACGTCAAT
CCACGTTTAGCGGAATTCTTTCTGGAGGAGATAAACGTGTCTCAACGATATTCTCGGGGTTGTTTTCTCCTGTTGTTGAC
GGGAACAGATTATACCGCAGGATGGGTGCCGACAGAACTGAAGGAGACCACCTTCCAAACGCTTCTCGCACACTGCGCTC
TTCTTAAGGATCATTACGAGCACAACGGACATTCTTATGTTTTGAAAGCAAATGGTGTGCAAACCGCTCAGCGAGCATGG
CAGGAAGAACAGGAACCGAGCTTACGTCAGGCGCTAAGAACTGCCGTGGAATGCGCGATCGCAGAGCAACCGGAAAACCA
GGAGCTCAAGTACATCCTGAAGAGTACGGCGGAACGGCAATTGGACTACGGCCTAAGTCTAGATGAGCAGGGCTTGGGAA
TAATGGCCGTGATTCGCGAATGGACGGGTGAAGGTGCACCCGGATGTGCGGTCGCTGCTAGTGAGCTCAAGACCCGTATC
CAGACAGTCCTGCCTCATGACAATGTTTTACCTTTGCACGTGGAATATCGTAAAGGTGGCATCGACGCCGATCATGACGC
TCACGACGAGTATCTCAAGAAACTTCGGGAATTGATACTGGACAGATTGCAGCAACTAGTGAACGCATCCGTGGAGGCTG
ACCCGGAAATCAAAAGTCGTAAAAAGATGGTGCAGGAGGTCTATGCTGAAAGTATGGCGCATTTTGCTCTTTTGCGGGAA
TTACCATTGATCGACGAGAACGATGAGGTTGTAGAGCGGGTCAAACGGCTTGTACTTGCAGGCAAGGAACGTAAACACGA
GCCTATTCTAATCTACGGACCAAAATCCTCCGGCAAGTCTTCTATTCTCGCGCGCGTCTACCAGGATGCGCCGGATTGGC
TCGCGGCTCCGACGCTTCGCATCGTTCGATTATGCACTTGGACACCACGATCCGCCTATAGCCTAGAACTCTTGCGCATC
CTTTGCCAGCACATCGGCTTCCTCGCCGGCGATAACGACGGCAATCTGCCGCGCGATGCTTCTTTCGATCCGCTCTACCT
CAACAATTGGTTTACCCTGATTATGCGCCGTATCGAGGAACATCCGCTTCCGGACCAATTGATCATCCTCCTCGACGACC
TTCACCGATTCCACCCGCTCGAGTGCGACATCGTCGCCGCTCTATCCTGGTTGCCGCTCGCACTTCCTGCAGGCGTTCAC
CTCGTTGCCACTTCCGCTCTTCCGCCCGAGGGAATGCGCCTCACACCGGTGCAGAAGGAACGTCTGCGCAGTGCCGACAT
CCTCGTCGATCTCTCCGGACGGGTGTGCGCGACACCGCATGTCGATTCGGTTCTGGAGCAGCTGGAGGACCTTATCGGGT
TCGCCGCAGCTAGCCGGATCGCTTCGATTCTCGCTTGCACCGAGTACGGTTTATCGGAAACGGAAATACTCGAATTGATT
ATGCCCACCGGAGGAGAAGGCCCATTGGTTTTGGAAGAAAGCCAATTTAACTTTGCGACTTGGTGCTTGGTCAGAAGAAC
GTTCGCGTCTTGGCTTAAAATACGAGTAATGAGTGGTCGATTAATGTTTTCTTGGCGTGGCCAATATCGCGAGGTCGCTC
TCAGAAAGTATCTCTCCAATCAAGACATTTCACGCAGTTGCCACGCGGAATTGGCCGGTCTTTTCTTCTCCGAGGACACC
GACGACAGTACTGAGAAATCATTGGAGAACCCAGCCGCTTCACCGCCTACCAAGGAAACGCCGTTCCAAAGCGCGCCACG
GACTCAGGATGTCACGTATACACTTCGACACGTGGAGGAAGCGTGGCTGCATCTTGTACGTGCCTCCGACGTCGACAAGC
TGAAGAAACTCGCTGTCTGCGCGTTCGACTTTCTCCTCGCGGCCGTCCAAATGGTTTCCGTGAGCTACCTGCGATGTGTC
CTCGAACATACAAGGCGATATCTTCTCGAGCGCGACCTGGAACTCGTGTATTACGCCGTCAGAAAGTCCAGCGACGTTCT
AACGCGGAATCCGCTCCAACTCGCTGCGCAACTTATTTGTTGGTTAAGGCCGGTTGCCGAGGATGGTGGTGACCTCGTCA
GTAGAATGGTGATGGCAGCTATGGCTTGGTGCGATGGTTATACCGCACCTTTGCTCGTACCCTTGAACGGATGGTTGCAA
CCACCTCTTCCACTGCAGATTCGAGCAATAGCGTGTCCTCAGGGGGTTAAGTTGATCGAAGCTGCGCCGTCCGGACAACA
CGTCGTCGTCGTGCCATTGCAGGGAGACGCTCAATTATGGCACGTCATGTCCGGTCAGCTTGTTCATACTTTCAAAGGAC
ATTCCAGTCCGATATCGTGCTTAGCCGTCACTCATCAGTCGCAGTACTTGCTGACAGGTTCCGAAGACACGTCCATCATC
GTCTGGGACATGAAGGATCTCGTCATAAAACGCCGAATTTGCGAGCATATCGCACCAGTTCTCACTTTAACTATGGCACT
CAACAATTCCATCATTGTGAGCGGTGGTGAAGATTCCAGAATTATCGCCACCAGCCTGCTCACCGGCGAGGTTCTGATGA
AAGTGGATCATCATCGAGGCCCCGTCACCACTATTCGCGTTGATTCGGCTGGTGAAGTTTTGGTTTCGGGATCGGCCGAC
GGCACTGTGTGTCTTTGGTCTCTGGAGAGCTTCAGCTTTCTCAACAGCATCGCTCTTCCTTCTCCGGTGGCCATGTTAGA
TGTGTCTGCGGATTCGGTTTTCCTTTTAGTCGCTTGTGAAGATCAAAAGCTCTATCTGCGATCTTTGGCGACGGGCACGG
AAATTCATACGCTCAGGGGACATCAAGGACCAATCAAGAGTCTCTGCCTGGCGAAGGACTGTAGAAGAGCCATCGCCGGC
GGCACCGAAGGCAGGGTATCTGTATTTGATATGCATAGCGGAAGGTTAATCAAGAATTTGCCCGCTAATCCGTCAGCAAG
CGTTACTTCAGTTAAGGTAACCGAGAAAGATGATTTTTTGATAACCGGCGGAGGTGGCCGTGTGACTTACTGGAGCTTCC
GCGGCGAGGAACCACCACCGAAGCCGCAGAAATCCGGGAAGCAAGATTCTCTGCAACCCCATACTGCACCAATTTCCTGC
CTGGACATTTCCAGGGACGGCGCCATGGCAGTCACCGGCGGTGTCGATTCTTTAGTTAATTTGTGGCAGCTTAACACTCA
TGAACTGTTGTCTTCCTTGGAGGGGCATATCGCCAGTATCACGTGCATCGCATTCTCCGCATCAGGCCTTTTCGTCGCAT
CCGGATCCGAGGATAAAACTGTCCGCGTGTGGGGTTTGACTCTGGGGCTCATCGTGGCTACGTTTCGACACCAGGCACCG
ATAACTGCCGTTACCGCTATGCTGGATGGTAGAAGAGTAGTTAGTTCGGATCGAGCTGGTTCTATCAGGGTCTGGGCAGC
GGACAGTGGTACACTGATCCAGTCTGTTTGCGGACCTGGACGATGCTTCGCTGTTACATCCGACATGAGATACGCGGTGT
GTGGGTCTGGTGATACCCAGGTGCGCATAATCAGTCTGGGCGCCGGTCCTGAGGAGAAGCATCAAGTATCGCACTCGCAG
GATATCACATGCCTGGTAGTGACGCCCGATTCTCAGTACCTGATCACCGGTTCCCGGGATATGAGTCTGAAGGTGTGGTT
GCTAGCTGGTGGTAAACTCTCCCAAGTATTGGTCGGTCATACTGATCACGTGACCTGCGTGGCGGTTGCGGTGGTCGACA
AATCTATAGTGGTATCTGGCTCCCGAGACGCCAATCTGATCGTCTGGGACATCAATACCGGCGCCGACTTGCACACTCTC
GTGGGCCATCTAGGTTACGTGACTTGCGTGCGCCTCTCCGGCGACGGCACTCTGGCCGCTTCCGGAAGCGAGGACAAGAG
TCTCATCGTCTGGGACACTAAGAAGGGCACACCGCTCAATTCCATCATGTTGCACGTACCGGTCCTGGGAGTTGAAATAT
CCACCGATTGCTCTAGAATGGCGGTGCATTTGCTGGAACACAAATGCATGCCTATTCTATGTCTGCACAACACACCCGCA
CAATACGTCAAACTGCCGCCGTACGTGGCGCCGCGGGACCTAAGACCTCCGGGACCGAAACGACCCGCCAAGAGATTGCT
GAAGAAAGAAGTGTCCTTAGATACTTATACTTGGCAGCGAAAATATGGACATCTAACATCAGGTATCACGGTCTCGAGTA
TCGAGGAACGATTAAAGCGTCGTTTTAGCGTAAGCGCATCAATGGAAGAGATCAGCAAGGCTGGTTTAGCCGGCTCACAA
CCTGGTCTCGGACCTGAACAGGCTGCTTTAGCACAATCTCAACATTTCGATCAACTAGAGGCACTGTGGAACAAGCAATC
GCCACCGCCGAGACCACGTGGCCTAGCTCGGACATTGACGAAGCAAAGTTCGCTTCAGGCCACTCGAATATCAGACTCTG
AAGAAGAAGTTTTGGGTGAATAA
PEP:
>LH12729-PA
MNLEVELIAGVIKGGLPPAHLPAPRLIKIFIAGERDDFSEERKQLLEMVGPELQSIYDDMGIEVLLVDMQYGASVNPDVN
PRLAEFFLEEINVSQRYSRGCFLLLLTGTDYTAGWVPTELKETTFQTLLAHCALLKDHYEHNGHSYVLKANGVQTAQRAW
QEEQEPSLRQALRTAVECAIAEQPENQELKYILKSTAERQLDYGLSLDEQGLGIMAVIREWTGEGAPGCAVAASELKTRI
QTVLPHDNVLPLHVEYRKGGIDADHDAHDEYLKKLRELILDRLQQLVNASVEADPEIKSRKKMVQEVYAESMAHFALLRE
LPLIDENDEVVERVKRLVLAGKERKHEPILIYGPKSSGKSSILARVYQDAPDWLAAPTLRIVRLCTWTPRSAYSLELLRI
LCQHIGFLAGDNDGNLPRDASFDPLYLNNWFTLIMRRIEEHPLPDQLIILLDDLHRFHPLECDIVAALSWLPLALPAGVH
LVATSALPPEGMRLTPVQKERLRSADILVDLSGRVCATPHVDSVLEQLEDLIGFAAASRIASILACTEYGLSETEILELI
MPTGGEGPLVLEESQFNFATWCLVRRTFASWLKIRVMSGRLMFSWRGQYREVALRKYLSNQDISRSCHAELAGLFFSEDT
DDSTEKSLENPAASPPTKETPFQSAPRTQDVTYTLRHVEEAWLHLVRASDVDKLKKLAVCAFDFLLAAVQMVSVSYLRCV
LEHTRRYLLERDLELVYYAVRKSSDVLTRNPLQLAAQLICWLRPVAEDGGDLVSRMVMAAMAWCDGYTAPLLVPLNGWLQ
PPLPLQIRAIACPQGVKLIEAAPSGQHVVVVPLQGDAQLWHVMSGQLVHTFKGHSSPISCLAVTHQSQYLLTGSEDTSII
VWDMKDLVIKRRICEHIAPVLTLTMALNNSIIVSGGEDSRIIATSLLTGEVLMKVDHHRGPVTTIRVDSAGEVLVSGSAD
GTVCLWSLESFSFLNSIALPSPVAMLDVSADSVFLLVACEDQKLYLRSLATGTEIHTLRGHQGPIKSLCLAKDCRRAIAG
GTEGRVSVFDMHSGRLIKNLPANPSASVTSVKVTEKDDFLITGGGGRVTYWSFRGEEPPPKPQKSGKQDSLQPHTAPISC
LDISRDGAMAVTGGVDSLVNLWQLNTHELLSSLEGHIASITCIAFSASGLFVASGSEDKTVRVWGLTLGLIVATFRHQAP
ITAVTAMLDGRRVVSSDRAGSIRVWAADSGTLIQSVCGPGRCFAVTSDMRYAVCGSGDTQVRIISLGAGPEEKHQVSHSQ
DITCLVVTPDSQYLITGSRDMSLKVWLLAGGKLSQVLVGHTDHVTCVAVAVVDKSIVVSGSRDANLIVWDINTGADLHTL
VGHLGYVTCVRLSGDGTLAASGSEDKSLIVWDTKKGTPLNSIMLHVPVLGVEISTDCSRMAVHLLEHKCMPILCLHNTPA
QYVKLPPYVAPRDLRPPGPKRPAKRLLKKEVSLDTYTWQRKYGHLTSGITVSSIEERLKRRFSVSASMEEISKAGLAGSQ
PGLGPEQAALAQSQHFDQLEALWNKQSPPPRPRGLARTLTKQSSLQATRISDSEEEVLGE
Swiss-ProtUncharacterized WD repeat-containing protein alr3466
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF13191  AAA_16; AAA ATPase domain     
SMARTSM00320     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
PRINTSPR00320     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

You might be interested in these researchers

You might be interested in these references