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Gene detail [Fasta]

Species Linepithema humile
GeneLH13149
Positionscf7180001004659:2929586..2941057[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH13149
sequence mRNA:
>LH13149-RA
ATGGAGTCCATCAGAAAATGGTTTTACAGGCCTAAGAGAGACGACACGAGTCTGCTGGCTCAGTTCTTTTATGCCGACGA
GTCCTTGAACGCGGTCGCCTGCGAACTGGACTCCTTCGACGGCCGACAAGAGCCGGAGAGATGCACGTCATTGGTGAACC
AGCTGCGGCACTGTCAGGACAAGGTGCTGACGATCTGCAATCAGATCATGGACGATCTGATACCGGAAAGTCGCGCCAAC
CGAGACTTCAGAGTGAAGTTCCCTGATGACGTCATGCAGGAAAATCTAGCTGGACAGCTTTGGTTCGGCGCGGAATGTCT
CGCAGCCGGCTCTTCCATCATGAATCGCGAGGCCGAAAGCTCGGCAATGAGGCCGTTGGCGAAAGCTCTCACCAAGTCGT
TGGAGATCGTCAGAAATTTACTTAGAGAACACGCGCTCAAAGGTCACATGAACTTGAAGACGCAAAATCCACTCGAGCCG
TCTCTGGAGAAACTCATCGAGTCGTTGAAAATTTTCGATCGGCTCTTCGCGGATTTCGAGCTATGCTACGTCGGCGCAAT
GGTGCCGGTGAAGTCGACGAAAGAGTACGAGCAGCAGGAACTGGTATGCGTACTCTTTTCGGAAACTTTGCAGCGAGCGC
TCGAGCGGGGACTGTTGGACCAAGCGGATGTAGATAACTATGAGCCGGCTTTAATGTTTACTATTCCACGCCTGGCTATC
GTCTCGGGACTATTGGCACCGCCTGGAGGACCGCTGTGTCTCAATTCGCCCGACACTATTAGCGAGATGTTTAGGCCATT
TCGGACTCTGCTGCTCAAGATAAGAGAGTTATTATGGACGTTAAACAAACGCGAGCTGTACATGCTGGAAAAGTTGCTAT
GCTCGAACGAGGAGCCGTCAGGCTCGATCACACAGTCGACGAAATCCGCGTGTCAGGACATACCCGATTTGGAGGAGTAC
GTGCACAATTTTTACAGCGGTTACCCGAATTGCAAGGAGTTCATTGTTGACTTCTACACTGTGACGAGGAATACGGGTAA
CAATATGGACGAGGTGGCGAGTGATGCGGTTCAGTCACTGGACGAAGAGGGCAAAGCCGATCAGTCGTCGAACAGGAAGC
GCGAGGATAGGGACGGGCGTAGGAAGAGGAGGAACGGCGCGGAGAGCAGGCGAGACGGCTTAAACATATCGTTGGACGGA
TGTGATAATAACGTAACGTGCGACAGCAGCGGCGAAAAGGCGCAGCAAAGTGACGGGGAAAGTGTCGGTGAACGAGTGCG
ATACGAACGGGAACTCTCTAACGCTTCGTGCGACGACGGACCGTTCTCTCATGACTGTGATTCCGTTTCCAACGGCGAGA
ACAACGTTAGCGAGCACTCCGGCTCGATAGCGCGAAACGACGCCGCGGGATCAGACGCGACGGAGAGCGGCGCTTCGAAC
AGCGCCGAGGACGCGCGGAACGAGGGTAATTTTATGACGCTCGACGTGGCGCAGATGCTCGAAGGGTGCTCCGACAACAT
CGAGATCCCGCAGACTCAGTATATGCTTAATCAGGTCACCCGCGAGAGCAATATAGACGGCGAGACCGCGCACATAGAGA
ATTCGCTGCCCGACCTGGACTCGAAGAAGCTCATCTCGGAGGCGAATAAAACTCTCTCGAATTTATTGCTGGACTCGGGC
GAGTGCCAGAACGAGATCTCGGAGCAGACGGACTCGGGCATATGCACGGTGATATCGTCCGAGAACACGAGCTTGTACGA
CAAGAGTCCGGAGGAGAAGAAAACGTTCGCCAATGAGATCGAGCAGGACGGATGCGGCATCTCGGACGAGGAAGATACGC
AGGAGAACACCAGCTACTCGTGCTCTAACATGAACTCGCCGAAGAAGAAGAATCCTACCATCGCGGAAAACTCGTGCGTT
TGCGGCATGAGGGGCGTCAGCAAGATGGTCGCGCCTGCCTTGGACCATTCGATCGACGGTCTGCACTCGAACGGCGACGG
GGAGCCGGCGAGCAAGAACGTTCCGCGAATCTCGTCGAATTTCGACGGCACTAACGAGGAATTTATCGGCGTAGCGTACG
GCAACGGCCAATTGACGCTCTGCGATTCGAATCAGTCGACCTTCCAAATAAACTACTCCGAGAACTGGGAAAATCTTAAT
CTAAACATCGACGCATCGAGCTCGAGGAAGGAGTTCTGGGGCGATCTCAAGTGCGAGAACTGCCCGTCCACGTCGCAGAG
CATCGACAAGATCGGCAGCAAGATCGAGAAATACGCGCAGGAGAAAATAACGGCGAAGAAGACGCGGGACGAGAGGCAGC
GGCGGCGGCATCAGCACAAGCTGGAGCGAAACGCGCAGCGAGCGCATCACAGATCGGCGGAGAAGAGACACAATTTGCAG
ATCATGCGGTCGGCCACGAGCACCGAGAGCTCCAGATCCAATTCCACGGATCGGTGCTTGAATCCCCGATTGACCGGCTT
CGGCGCCAGCCTGCATCTTGGCCAGAACACGAGGCAGATACCGAATTTTGGCAGCCACAGTCCGCACATGAGCCCGCGGT
TGCATCACTTCGAGACGCGCAGCACTCCGGGCTCCGGACAGCACTGCTGCAATCTCGGGACGCACGGGACGACGAACAGA
CGCTCGTCGCCGCCGAGCCGAAAGTTGTTGGATCACAGGCGATCCAAGTCCGAGCAGATCGCGCGAATGAAAAGGAGAGA
CGTCGAGAAGAGGGAGAAGTACGATCGGGACAAGTATGCGCGCACCGAGCACAACAAGAGAAAACTGGGAACGGGCGGAA
GCTCTTCTAATCTGATAAACGACGGATTAGGCCCGCGGACGGATAAGAGCGGCTTGGTGACGGAAATCGCGTCCTCGAAC
GCGTCGCACAATGTAGGCTGTCACGAGTTTCAACACGCGCGGGGCAGTCACTTGCGGAGATCCGCCCGTGCGAGATTGGT
CAACGCGTCAACGGTATCCGGCGTGTCGTGTTTGAACACCGATCAGTCGTCGAGCTACAAAGCCGACATAGTTTCGAGCT
CCAGCTGCTCGAGCTGCTGCGAGTCGAGCTCGGAGACCAGTGAATTTCACAGCGATTGCCAGGATGACGAAGAGATCGCA
TTAGCGATGCAGGCCGCTGAGATCGCAAATAGAAATCAAATTAGAGCCAAGTTTCGATCTTCGGAAGATTTGGTTCATCG
CCTCTTCGTTTGCATAGCTGGCGTGGCGGATCAACTGCAAACAAATTTCGCATCGGATTTGCGGAACATTCTGAAATGCG
TTTTTCTCATGAATAGTAGTCAGATGATCGAAGACGCTGAAGGATCGAAGGATCAAAGTCCGAACTCCACGAATCAATCA
ATAAATGCGCCGCTCGACACGGTGGAGACTGGAAGTATTCACGAGCGGCAAGATTCATTGGCTGAATACGAAGATATGGA
TGAAACCGCTTTGACACACGACCGAACTTCTCCCGTGACCGAGAGGGGAGAGGAGTGCGTCGAGAGAGCGCCTGCTTGGG
TGCCAGACAACGATGCGCCGCGGTGCATGGCATGCCAGGCGGGATTCACGGTCGTGCGGCGCCGGCACCATTGTCGAAAC
TGTGGCAAAGTGTTCTGCGGCCGTTGCAGCAGCAACAACGTCCCACTGCCTCGTTACGGGCACACGAAGCCTGTGAGAGT
GTGCAACAGGTGTTTTCTGTACCAAGTGACACCTTTTACGGTCTCCCAGGTCACGTCTACCAGCTGA
PEP:
>LH13149-PA
MESIRKWFYRPKRDDTSLLAQFFYADESLNAVACELDSFDGRQEPERCTSLVNQLRHCQDKVLTICNQIMDDLIPESRAN
RDFRVKFPDDVMQENLAGQLWFGAECLAAGSSIMNREAESSAMRPLAKALTKSLEIVRNLLREHALKGHMNLKTQNPLEP
SLEKLIESLKIFDRLFADFELCYVGAMVPVKSTKEYEQQELVCVLFSETLQRALERGLLDQADVDNYEPALMFTIPRLAI
VSGLLAPPGGPLCLNSPDTISEMFRPFRTLLLKIRELLWTLNKRELYMLEKLLCSNEEPSGSITQSTKSACQDIPDLEEY
VHNFYSGYPNCKEFIVDFYTVTRNTGNNMDEVASDAVQSLDEEGKADQSSNRKREDRDGRRKRRNGAESRRDGLNISLDG
CDNNVTCDSSGEKAQQSDGESVGERVRYERELSNASCDDGPFSHDCDSVSNGENNVSEHSGSIARNDAAGSDATESGASN
SAEDARNEGNFMTLDVAQMLEGCSDNIEIPQTQYMLNQVTRESNIDGETAHIENSLPDLDSKKLISEANKTLSNLLLDSG
ECQNEISEQTDSGICTVISSENTSLYDKSPEEKKTFANEIEQDGCGISDEEDTQENTSYSCSNMNSPKKKNPTIAENSCV
CGMRGVSKMVAPALDHSIDGLHSNGDGEPASKNVPRISSNFDGTNEEFIGVAYGNGQLTLCDSNQSTFQINYSENWENLN
LNIDASSSRKEFWGDLKCENCPSTSQSIDKIGSKIEKYAQEKITAKKTRDERQRRRHQHKLERNAQRAHHRSAEKRHNLQ
IMRSATSTESSRSNSTDRCLNPRLTGFGASLHLGQNTRQIPNFGSHSPHMSPRLHHFETRSTPGSGQHCCNLGTHGTTNR
RSSPPSRKLLDHRRSKSEQIARMKRRDVEKREKYDRDKYARTEHNKRKLGTGGSSSNLINDGLGPRTDKSGLVTEIASSN
ASHNVGCHEFQHARGSHLRRSARARLVNASTVSGVSCLNTDQSSSYKADIVSSSSCSSCCESSSETSEFHSDCQDDEEIA
LAMQAAEIANRNQIRAKFRSSEDLVHRLFVCIAGVADQLQTNFASDLRNILKCVFLMNSSQMIEDAEGSKDQSPNSTNQS
INAPLDTVETGSIHERQDSLAEYEDMDETALTHDRTSPVTERGEECVERAPAWVPDNDAPRCMACQAGFTVVRRRHHCRN
CGKVFCGRCSSNNVPLPRYGHTKPVRVCNRCFLYQVTPFTVSQVTSTS
Swiss-ProtLateral signaling target protein 2 homolog
SUPERFAMILYSSF57903  FYVE/PHD zinc finger superfamily     
Gene3DG3DSA:3.30.40.10     
PfamPF01363  FYVE; FYVE zinc finger     
SMARTSM00064     
ProSiteProfilesPS50178  ZF_FYVE; Zinc finger FYVE/FYVE-related type profile.     
OrthologiGroup-00374    Lateral signaling target protein 2 homolog      

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