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Gene detail [Fasta]

Species Linepithema humile
GeneLH13071
Positionscf7180001004659:1459368..1472502[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH13071
sequence mRNA:
>LH13071-RA
ATGACTGCAGGCACCAGTTTAGTGGTGCCCATAGTGCTATGGGGCCGTATAGCACCAACCCATTGTATTTCCTGTGTCTA
TTTATCCCGGGATCAAAAAACATTGGTAACAGGATGTTATGATGGGCAGATATGTTTATGGCAAGTGGATCCAGAAACAT
TAAAGATGACTCCAAGATGTCTACTTGTTGGACATACCGCTCCAATAATGTGCCTCAGCCGAGCTAGTGTAATAATGGAA
CAAAATTTCATCGTCAGTAGCAGTGAAAGCGGAGAGATGTGTACTTGGGATCTAGTCGACGGAAAGTGTCGTGAGGCGGT
GAAGCTTAATAACATTCACACACAAATGTTACCCTATGTCTCCGCGGGTGGAGAAGATGTTAGATTGTTTTGCTCCGGGT
ATTATCCTGAGGTTTTGGTGATGGATCCATTCAGTTTGGAGGTGCTGTTCACCTTAAGCTCTCGCGTCAATCCAGATTGG
ATTAGCGCTTTGCACGTTTTGCGGCCGGCCAAACGGAAAGACGACGTCGTGCTGGCTCTGACGACGACGGGCACGGTGAA
GGTGTGGACACTTTTGGGACACGAGAATCGGAACAGCGAGCCCTTGTACGAACACGAGAGCAAGCAAATCCGCTGCTTAA
ACGCGCTGGCGATGACCTGCTGTCCTTACAACCAGAGAACAGTGCTTATCGTGTGCTCTAAATACTGGCAGATATTCGAT
GCCGGTGATTTCTCGGTCCTCTGCTCGGTAACGGCTCCACGTGGGGAACGTTGGATGGCAGGCGATTTCTTGGCCGCGGA
CAGGGTCATTCTGTGGAGCGACGAAGGTCATGGATATTTATTTAAGCTTCCAGCAAATAGCGTTGCGGACAACAAGGATT
TCCATACCGCTAGTGCCGAATATGATCAGCCGTATCTGTACTGTACACTCACGCAGCCCGGAGATAAACCTCTTTCCTGC
CCGCCGGCTATGCGACTGGTCACCGTGCAGCGTCAGAACAAGACTCTAAAGTATCTTTTACGCGGGGACAGCGAAGGTGT
AGTTATTCTCTGGACGGTGCCAGACGTGACGACGCAGCAGCTTGCTCAGATATGCCAGAACGATGGAACTCTGCCACCGG
CATTGCCGCCAACCGTCAAGACAAGCCTCACCCTTGCCTGGGACGGGATGAAACCGCCTCCCGTCGGCATACTCGATCAG
CTGGACTCTGGCGATGGTCAGGGTATCAAACTCACCGCCTGCATATATCTGCCGCAGCAGAGTCGGCTAGTCGTGGGCCG
CGAGGACGGTAGCATCATTATCGTGCCGGCGACGCAAACCGTGATGCTTCAACTCCTCCATGGAAATCATCAGCAGTACG
ATGACTGGCCACCGCATCAAGTTCTTCTGGGTCATTCGGGACGAGTGAATTGTCTGCTGTATCCTCACGGCGCAGCATCT
CGCTACGATCGCACCCACCTTGTTTCCGGCTCCGTCGATTTCGCTGTCTGCCTCTGGGATTTGTATGCCGGTACACTGAT
CCACCGGTTTTGCGTTCACGCCGGCGAAATCACGCAGCTAATGGTGCCGCCTGACAATTGCAGTCCCAGGATACAGAAAT
GCGTTTGCAGTGTTGCGTCCGATCATAGCGTTACGTTGCTCTCGTTGGCCGAGAGGAAATGCGTCGTACTTGCCTCGCGA
CATCTTTTCCCGGTTGTAACCATCAAGTGGAGACCATTGGATGACTTCATGATAGTCGGGTGTTCGGATGGCGCCGTATA
CGTTTGGCAAATGGAGACCGGTCATCTGGATCGCGTGTTACACGGCATTATCGCGGAAGAGGTGCTCTATGCATGTGACG
AGAACACTATAGCGGCGGCCGGCGGGTCCGCCGCCGGCGGTGAGCTAGGATTAGCCAATCCAGCCGTGCATTTCTTTAGG
GGTTTGCGCCATCGAAACCTATCGGCGATCAGACACGCAACGCAGAGAGGACTGCACCAATTGCAACAGCTTCACGGTGG
ACACGGTCCTGATCACGGAAATCAGATAAAAGCCAAAGGCTCGCCGCTAATGATTCAGGGCTTCAGGAGTAACCCGAAGG
ATCCGGAGAGTCATATCCTGTTCTTCGACATAGAGGCATTGATAGTACAATTGCTCAGCGATGAATACGGTGCCATGTCG
CCCGGTTCGTTAGAAGCGCAGGGGCTTATCTCCGCCGCCGAATATCAAAAAGTCGCAGCGCTTACTCAATCTGCTAGTCC
CGATGCGCATAAGAAAATTGTTGACTTTTTCGGTCGCGTCAAGGATAAGGCGGGCGATGTTGAGCGAATATTGAAGGAGA
AGGATCGTCACGGTATATTGGCTAAGATGAAGGAAGGTGCGGAGAATGTGCATACTAAATTACAGGCTAAGGCGGAAAGT
GTCGGCCTCAAGTCGGCATTTGATGGCAAAGGCGACAATTGGAACAACAGCGATGCGGCGAAGAACAATTTGAAACGAAA
CGGTGCGTTTAGCGAGCCGAACGCGACGATGGAAGTGGCACAGTTGCTTTTGAGTCTTCTGCACGCCTGGGGCATGGATC
CAGATTTGGACCGGGTTTGCGAGGGAAAATTGGGTTTGCTGCGGCCTATGGTTCCAGTCTCATTCGGGGTTTTATCCAAA
GGTGGTTACATGTCATTACTATTACCTACTTGGCAAACACAGCTTGAACCAGTCGGCGAACCTGCAACACAGCTGGAGCA
ACGTTTGCCAGCTGAATTAGTCAGGCAAGAGAGGCTTACTAGAGCATTCACCGCAAGAGCCCACTGGGAGCTATCAACGA
CCTTAACGAGTAATCATTTATTGGCGGTGGTTGCTTTAGCGAACACTTTGATGTCGATGAACAATGCAACGTTTGTACCT
GAGCAAGAACGAAATCGGAAGCTGCACAGGCCCGGCAATAGAGGTGCGATGAATTGGAATAAGACAGAGGAGGAAAATGA
GGAAATATACACAGTTCAACAGGCGCAGATCAAGCAAGGATGGTCTCTTTTGGCTACGTTGCATTGTGTATTGTTACCTG
ATAAAGTTACAGCACAAGGTGGCGCAAAGACTTTCAAGCGACCACAAGTCGAAATGATGGCACGAAGGTGGCAGCATCAG
TGTGTGGAGATTCGAGAAGCAGCACAGGCTCTGCTGCTTGCCGAGCTCGGCAGGATAGGCCCGAAGGGTCGCAAAGCGCT
TGTCGATAACTGGTCACAGTATTTACCAATGTACAGCACTCAGGAACCTATCGCGCCGCAACCACAGAATCAAAGTTCAC
CGGCGCCTGGCAGTCCGGTGCCGCCGTCTGAATCACAACCAGAAGAAGAATATGAAGAAGAAGAATTAGCTGAAGCAGAA
AGTATAGCTAGGAAGCCATCGAGCGTGGCGGAATTGAAGCGAAAGCAAACCACGGCGGTGGTGCTGTTGGGCGTGATAGG
GGCTGAATTTGGCCAGGACGTAACCACGGGTAGCCAAAGAAGGGACAACGAACAAAGGCGAAAGAGTTCTATCGTGGAAG
GCTTCGGCATAGGAAATAATAATCTTGCTAGGCACACCAGCATGGCGCTCACTCACTTGTTGCACGCGCCTCATTCTCCG
AAGTTGCCAATGCACACGGCGCTACGAAGGGCTGCGATTGATCTTATTGGCAGAGGATTTACCGTGTGGGAACCGTACCT
TGATGTGTCAAAGGTTCTATTAGGCCTATTGGAAATGTGTTGCGATGCGGACAAGTTGGTGCCGAATCTGACGTACGGCC
TTCCTCTCACGCCGCAGGCCGACAGCTGTCGCACAGCGCGTCACGCGTTGACGCTAATCGCTACCGCCAGACCAGCCGCC
TTTATCACGACGATGGCTCGCGAAGTAGCTAGATTTAACACTCTTCAACAGAATGCTCAGACCTTAAATGTCAATTTGGG
CGCGAGTGTGTTGACCAGAGCAAAGCCAGAAATTCTTAGGATCGTTGAACAACTGATTGATAAGATGCAGAGCGAGATGA
GCGATCTTCTTGTGGAGGTTATGGATATCATTTTACATTGCCTTGATCCAGGTCATCTGAAAATAAAGCCTTTGAACGAA
GTGTTCCCGGCTGTTTGTAGATTTAATCAGGTCAGTCATTGTCCGGCAACTCGCAGGATAGCGGTTGGTGGTCGCGGTGG
CCAGTTAGCATTGTACGAATTGCGAGGTAATGTCAAATGTCAAACTGTCTCTGCTCATTCGGCGCCGGTCACCGCATTGG
CGTTTTCGCCGGAAGGAAAGTTCCTTGTCAGTTATTCTTGTTCCGAGAACAAACTCTGTTTTTGGCAGCAAACCAGCAGT
GGCATGTTTGGTCTGGGCAATTCGCAGACTCGCTGTGTGAAATCTTACAGTACTGCACCCATCAACGATGTGGCACGGCT
GAATCCTATGCGTCTGGCACGGCTGATATGGATCAACAATCGTACAGTCACCCTAATGCTTGCCGATGGCTCGGAAACAC
GCTTCAATGTTTGA
PEP:
>LH13071-PA
MTAGTSLVVPIVLWGRIAPTHCISCVYLSRDQKTLVTGCYDGQICLWQVDPETLKMTPRCLLVGHTAPIMCLSRASVIME
QNFIVSSSESGEMCTWDLVDGKCREAVKLNNIHTQMLPYVSAGGEDVRLFCSGYYPEVLVMDPFSLEVLFTLSSRVNPDW
ISALHVLRPAKRKDDVVLALTTTGTVKVWTLLGHENRNSEPLYEHESKQIRCLNALAMTCCPYNQRTVLIVCSKYWQIFD
AGDFSVLCSVTAPRGERWMAGDFLAADRVILWSDEGHGYLFKLPANSVADNKDFHTASAEYDQPYLYCTLTQPGDKPLSC
PPAMRLVTVQRQNKTLKYLLRGDSEGVVILWTVPDVTTQQLAQICQNDGTLPPALPPTVKTSLTLAWDGMKPPPVGILDQ
LDSGDGQGIKLTACIYLPQQSRLVVGREDGSIIIVPATQTVMLQLLHGNHQQYDDWPPHQVLLGHSGRVNCLLYPHGAAS
RYDRTHLVSGSVDFAVCLWDLYAGTLIHRFCVHAGEITQLMVPPDNCSPRIQKCVCSVASDHSVTLLSLAERKCVVLASR
HLFPVVTIKWRPLDDFMIVGCSDGAVYVWQMETGHLDRVLHGIIAEEVLYACDENTIAAAGGSAAGGELGLANPAVHFFR
GLRHRNLSAIRHATQRGLHQLQQLHGGHGPDHGNQIKAKGSPLMIQGFRSNPKDPESHILFFDIEALIVQLLSDEYGAMS
PGSLEAQGLISAAEYQKVAALTQSASPDAHKKIVDFFGRVKDKAGDVERILKEKDRHGILAKMKEGAENVHTKLQAKAES
VGLKSAFDGKGDNWNNSDAAKNNLKRNGAFSEPNATMEVAQLLLSLLHAWGMDPDLDRVCEGKLGLLRPMVPVSFGVLSK
GGYMSLLLPTWQTQLEPVGEPATQLEQRLPAELVRQERLTRAFTARAHWELSTTLTSNHLLAVVALANTLMSMNNATFVP
EQERNRKLHRPGNRGAMNWNKTEEENEEIYTVQQAQIKQGWSLLATLHCVLLPDKVTAQGGAKTFKRPQVEMMARRWQHQ
CVEIREAAQALLLAELGRIGPKGRKALVDNWSQYLPMYSTQEPIAPQPQNQSSPAPGSPVPPSESQPEEEYEEEELAEAE
SIARKPSSVAELKRKQTTAVVLLGVIGAEFGQDVTTGSQRRDNEQRRKSSIVEGFGIGNNNLARHTSMALTHLLHAPHSP
KLPMHTALRRAAIDLIGRGFTVWEPYLDVSKVLLGLLEMCCDADKLVPNLTYGLPLTPQADSCRTARHALTLIATARPAA
FITTMAREVARFNTLQQNAQTLNVNLGASVLTRAKPEILRIVEQLIDKMQSEMSDLLVEVMDIILHCLDPGHLKIKPLNE
VFPAVCRFNQVSHCPATRRIAVGGRGGQLALYELRGNVKCQTVSAHSAPVTALAFSPEGKFLVSYSCSENKLCFWQQTSS
GMFGLGNSQTRCVKSYSTAPINDVARLNPMRLARLIWINNRTVTLMLADGSETRFNV
Swiss-ProtWD repeat-containing protein 7
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50082  WD_REPEATS_2; Trp-Asp (WD) repeats profile.     
CoilsCoil
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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