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Gene detail [Fasta]

Species Linepithema humile
GeneLH13017
Positionscf7180001004659:942664..956105[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH13017
sequence mRNA:
>LH13017-RA
ATGTCATTATTCAACAAACCGAAGCGAAATATACGCCGACGTCCTTTCAACGATGAGGATGAAGATAATGAGAACAGAAT
GGAAACGGAGGACGCGCAGCCTATGAAAATTAAGACGAAGAAGAAGGATAAACCAAAGCAGACGCTCCTCAGTTTCGGAG
AGGAGCTGGAACAAGGGGACGATGGAGAGGTTTTTATAGTCAAGAAATCGTCAAGGAGCAAAAAACTGATGAAACAACTA
GATCACGAAAGGAGAAAAAAGAAAGGTGAAGAGAAAATGCAAGTGGACACTGAGCAAGCGAATAAATCCATTAAGCAGGA
AAAAGATTTAGAAATAAAGACAGATGATCTAGTAGTTAAAATAAAAAACACAGGACCCCTGATTTTAAATGGACGGGCTG
CATTGGCAGCAGGAAAGGATGACTATACATCGGGTGAAGAGGAAGATGAACCTTGCAGTCACAAATTTAGGAAAAATACA
GATAAAGCCGAAACTATGAAAATACTTCTTGAAAGTGGATGTATACCTGATGCTGCTATGATCCATGCAGCGAGAAAACG
TAGACAAAAAGCGCGAGAATTAGGAACCGATTACATTCCTATTGAGGAACAAAGCGATGACAAAGGCAAGTCAAGATTAA
TACGAGAAGAAGATCATGATCGAAGTGACGATGATGATTCTCAAGATCGACTTGATATGACTATCAATACAGAAGCACGT
GATAAAGAAAAAAGGAGAGAAGCGTTTCTTGCTTCTCAAGTCCCAATGAAATACAATGAAAGTGAGCACGAAAATGAAGA
AGAAGAATGGGAAGCTCAACAAATACGAAAGGGTGTAACTGGTGCTCAGGTAAAGGCGAAATGCAGTAATAAGTTAAAAT
TGGAGAAAATCTTTCGTGGTTTGCAGATTGTAGCGGCACAGCAAGATTCTATGTTACAACAACAATACACAATGGGTATG
AATGTTAATCAGATGATGGGATCTAATGTACCTTTAGAAATGGTATTAATGCCTGCGCCGCCGCCGCCACCGTCCATTCA
ACCACCAGATCCAACAAAAATCGTGCCTGTTACACCACAGGAAGTTGTAAAGAAAATGCGTGCAAGGTTGGACAGTTTGA
AAGAGGTACATAGACGGCATCAGCAAGATCAGGAGCGTTTAGAGCAAGAATTACGACAAACGATGAAAGAGTTGGACGAG
GGTGAAATCCGCACGCCGCATTACGCACAACGCTTCAGATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGA
GTGTCTTGATGAGAAGCTTCCCCTGGTTATCGAGTTGGAGCAACGCTGGTTAATTCTATATGGTGAACGATCAACCGAAT
TGATGGAACGGAGACGGCAAGATACGAGGGATCAAGCGGAAGAAATAACCACTGCAGCAAGAGGCCAAGCTATGAGAAGA
GGACCGGAAGTAGAAACTCATGTACGACGAGCTACCGAAAGGGAAGGTAGGAGAGCCCGTCGCAGAAGAGCGAGAGAATT
AGCCTCGAATATGCCGAAGCATATCGATGGCATGTCCAGTGACGATGAAGTCACCGAACAACAAAATCTTGCATTTAAGC
AAGCTAAAGATGAAATTGACAATGATTGTAAAGAAATATTTTCTGATGTCATGGAGGAATACTGTACAGTACGTGGTATT
CTTTCCAAGTTCGAATCATGGAGAGAAACGGACATAGATGCCTACACAGAGGCCTATGTTTCATTGTGTTTACCCAAGAT
TATTTCGCCGATTGTCAGATTACAATTAGTTACTTGGAATCCAATAATGGAAAGTGCTGACATAGAAAGGACAAAGTGGT
ACAATACATTGCTTTTATATGCCATAGACAGTAAAGAGACGGAGGAATCGTTGAAACGGGATCCAGATGTTAGATTAGTC
CCATCAACGATTGAAAAAGTCGTGATACCAAAATTAACATCTATTATTGAGAAAATTTGGGATCCAATGTCGACATCCCA
AACGCTACGTCTTGTGGGAACTATAAACCGCCTGATCAAGGAATATCCGAATTTAAATGATACGAGCAAACAATTAGAAA
CGTTATTCAATGCAATTTTAGATAAAATTAAAGCTGCTGTTGAGAATGATGTTTTCATACCTATTTTTCCAAAACAAGTT
TGGGATACGAAGCATCAATTTTTTCAACGACAATTTGCGATGGCTGTCAAGTTGCTACGCAATTTATTAAGTTGGCAAGG
TCTTCTCGGGGATGTGCAGTTGAAAAACTTGGCACTAGGCTCGCTTTTGAATCGTTATTTACTTGCTGGATTACGAGTTT
CTTGTCCGACTGAGGCTTTGTTTAAAGCAAACATGATCATGAGTACACTACCAAGAGCTTGGCTACAAGGTGAAACTATA
GAACATCTCAGAATGTTTGCCACCCTCATTCAACAGCTTAGTGAACAATTGGATCAAGCTAATCCTGCACATAATGGAAA
TGTTGCGCAAAGTTTTTTTAACTCTGGGATGGAATACGAATATTCTTACAATGCTATTTCGAGCACTGGTGTATTAGTGC
CATCCAATGCTGCTTCCTCGTGGAGTCTCAATGGGAAGCTCATAATTCAGGCGGAAAACGACTATGTCACAATACAGTTA
CAATCACTGAAGACGAGTATGTGGAATGGAAATGTAAACGAAACAGGTACAGAGATCGATATCTACGACGACGCCTTGGA
ACTTTTGAAACCCTTTCAAATATCATACAACAAAGGACTCGTCGAGAACTTCAGCACCGAGGCGGAATCTGTGTGGGCGA
CGAATATAAAACGGAGCATAGCTGGAATTTTACAACTGGACCTTGTTAATTTGGAAAAACAGATTGCGTTTCAGTCTACC
GAAATTAATCATTACGGAAAGTGCGATATTGATTACGTTGTAAGCAGCGAGGGTGAAGATCAGCGTTTGATAAGAAAATC
GCTAGATCCGCGAATGTGTATCGGGCATCCGTGTCGCAATTGGTCGAATGTTCCTAATGTACAGTGTACCGATGAAGACC
AAAATCCTATTCTCAAAAGTAGCGAGAGAATATATGCACTGCAAACCGATGGAACCGATCACAATATCATGTCCGTCAAT
GCATCCGGAAGTATTTACGTTCAGCCCTTTCAAGGCATGGGAGAGGCACACTATCATCTTGTTCAGCAGACTATCGTATT
AATCTCAAAGAAACGTATAACGAAAAAGATCGTTACGAATAATTTACGAAATACAGTTCTTCAACACGAGCTGCCGGAAG
AAGATCTCACGCAAGGTAGAAGCACGCCAGATAAAGATTTCGCCTTCAAATCTATAAGCCACTTATTGGATCGTTTGAGC
CACAGGCTCGAGAATCCCGGTTTGGATACTGAAATTCACAATCTGCACAATACAACGATATCCGTGCTTCTTTATTATCT
CGGTATGCTGGATCGTGTTGATTTGGACAAAGCCTACAATCGGATCTCGGGAACTAGTTACAAAGAGGAAACAGTACGGA
ATATGTTCCTCGAGGCGCTGCCGCAGGTCGGCAGTAAGGAATCCGCGCTGTTCATATTGGATCTTATTCAAAAGAACAAA
GTATCCGACATGTCTGCGATTCAGCTTCTTATGCGACTACCGTTTCACATAAGAAAGCCTGATGTTCAACTATTGGTCAG
CCTACAGCCGTTCCTCGCGCTGCCGAGCAAGATCTCCGCCCAAGTGCAAAATACCGCGATCCTCACGTACGGGACGTTGA
TATACAAGACCTGCCTGGTGCATTGTCCGTACGAGATGCTGGACGATTACGTGCGTCTGTACCTCGACAAATTCACAGAG
ACTACTCAATATGGGCAGAAGATGATCTGGCTAGAAGGTTTGGCAAACATACAGCTAGGCAGAGTTGTCGAATTCTTGGA
GCCCATAGCCAGCGGCAACAATGCTGAATCGCGGCACTTTCGGGTGCTCGCGGCTTGGGCTTCTCTTCCCACGGCACCAT
TGCGGCCCGACGTTATTTATCCTGTATACTGGCCGATCTTAATCAATAGAACCGAGCATTTGGAGATGAGAGCCGCTGCG
TTAACTTTGCTCGTTGTTTCGAGTCCTACGCCTAACAGATTGATGTCTCTGTATTGGTACATGCAAAGTGAGCCCAACCA
GCATCTGTACAATTACTTTTACACAATGTTAAAATCTATGGAACGCACCACGTACCCTTGTTACAAACGCATAGGCAGAA
TTGCGGCACAATTCAGCCGCATACTTCAGAAACCGACGAATGGCGAATATCTTGTTACTGGTAATTATTTAATGGATTAT
CAAGATTCCTCGAGGAGATTCGGCGCTATGTTGAACGGCGTCATCATAGCCAATCCTTCAACAAATATTCCGGAAGTGAT
TTACGTAACTTTGAATAATTACGGTAGCGGTACGCATATCAATCATGTATCCTTGTATGTCAGAGCGGAAGGGATCTTCC
ATTCATTGGCGACTTCCGCCGAAAACCCGACGAATATAAAAGATATTCTGAAAGAATTCAAATTGAATGAACGACAAAAG
GGACCCGTGCATTTAGAAGTAATTGCGCGTATTCAAGACAAAACAGTGTTGTGCGTTCACTGGAATGAAACGAATATAAT
CGATGGATTGAAGCACTTGTCTTCTTTATCGGACAACATGTATCATATGTATCACAACATGGAATTTCACGTTAATCAAC
AACGTATAAACGTGCCGCTGACCATAGAATCGGTGCAAGTGACCGATTTCGGCACTAACGTTAGACTTGCAATGACGGGA
ACGTCGTTGTTCTCAATGAGAGGAAATTTCACACGCGATTTTCCTAGACGAAATAATCATGTTATTTTACGCACATCTGT
CCACGGTATTGAAATAATAGAGAATTACAATCCATTGCTTGATTTGTGGCATGGTGCCGAGAGGGTTCAGTCGCTGCATG
GATATCTTCCTATTAACATTACAATCGGACTCGACGAGCATCCGTTTATTTCGTACAATACTCTAGGAGGGCATCTTAAG
ACGGGAATTACAGCACACGCTAAAACGCTTACAAGCGTTAGGGGTGTCAATGTTAAATCGAAGTTGGAACGAGCTTGTCG
TTTGTGTCCTGCGTCATACACAGTTACAAAATCGCCTTCCTCTAATCCGAAAACTGTGAATATTATTGACGCTGGACTTC
CCGAAATAGGCGGTCGACTGCAAGTAAAGGTATTTGATTGCGAAAGCACCGTATCTCAGGAAACGTTGTTCAACGATATT
TGGTCCTCTCATCGAAGCAACTATCAAACGTGGCCAAGCATGAAATTTACTTTAATCGGACTGCATTTCTTGGATTACTT
GACTTACTTGCCACCAAAAGGCAGTTGTGGATTAGCTGCTTATATCGAGTCACTCGAATCGGGACCATTGCAGACGAAAT
TGGAATATTTGAAAAACGAGAAACATCACATTTTCTCCTTTACACACTACAACTTGGAATCTTCGAAAGTTCTTCATCAG
TGGAACCTGGCTGCGTTATATGAAAGTACCAGTTCGTTGTCGGATGTCCTTAAAATTAAGGCGACCGAAATCGTGCCTGA
TGAACGCGTATTCAAGTTTTGCGTAGAGGCCGAAAGACACGTACCGTGGCAATGGGAATTTTTGAGCGACAAACCGAGCG
ATTCGTCTCGCATAAAATTAAATATTGTCTGGGGATCGTCCGACACCGCGAAAGGAAAATGCAACGGATCTTCCGTATCG
ATAAATTTAATTGGCGAAATTAGCAACGAGCAGTTCGAGGAAAGCAAGAAAACAAATTGGCCTTACGGTCAGTGCAAGAA
AGAATCTACGGGGAAGAAATTTGTGCCTTACACAGATGCTTGTTACGAAGTATCGAGAGAATTGTCGACCTTGCGGAGAT
ACAAAATCTTCGCAGAATACAAAAATTTACCGGAGAACTTATCCAAGTTAGTCTGGAAAATGTATGCCTTATACGACCTG
ATCGGTGGAAATAGCAGTAACGCTAGAAAATCTGACGAGCCCGTAATAATCGCAACTTTCCCGAAAGAATCGAACGTTGG
CGAACTGCAACTCAATGGAGACAAAATTGCCATTGAGTACAATTGGCGTTACATTGATATCTTCCTAGAACGAACGAGAA
TTCACAAGTATATGGAAATACCTTTAGTTAGAATGTTTTCTAGCACGTGCATCATAACGAAAAATTCCATAAAATCAGCA
TACAACACGGTTTACACTTTCGCTAAGAATAGTGAAGTAATATTACTCGGACAATGCTACGACGAGAACCCTAGACTTGC
GTTAACGGCAGCGAACGGTGCATATGGAATCAATATAAACTTGACTGACGAATCAGGAACTACGTGGATTACAGCCGGTG
AAGATAAAGGAACCTTGTATAATGCTACGTCAAATATACAGTTGCAATCTAATCATGTATTTTATACACTGGGAACTAAA
AAGATCAAAACGGGCGACAATGCGATCGACATCTTGCTACCCAACATTTTTCTACATATGCATTGGACGCAAGAGCAAGT
TCTACTCTTTTTCCCTAACCACGTGTTAGAATTTAGTTGTGGAATATGTACGCTTGACCATCCCAACATCGATAGATTAT
ACGAAAAAGTCTAA
PEP:
>LH13017-PA
MSLFNKPKRNIRRRPFNDEDEDNENRMETEDAQPMKIKTKKKDKPKQTLLSFGEELEQGDDGEVFIVKKSSRSKKLMKQL
DHERRKKKGEEKMQVDTEQANKSIKQEKDLEIKTDDLVVKIKNTGPLILNGRAALAAGKDDYTSGEEEDEPCSHKFRKNT
DKAETMKILLESGCIPDAAMIHAARKRRQKARELGTDYIPIEEQSDDKGKSRLIREEDHDRSDDDDSQDRLDMTINTEAR
DKEKRREAFLASQVPMKYNESEHENEEEEWEAQQIRKGVTGAQVKAKCSNKLKLEKIFRGLQIVAAQQDSMLQQQYTMGM
NVNQMMGSNVPLEMVLMPAPPPPPSIQPPDPTKIVPVTPQEVVKKMRARLDSLKEVHRRHQQDQERLEQELRQTMKELDE
GEIRTPHYAQRFRYYQELRGYVTDLVECLDEKLPLVIELEQRWLILYGERSTELMERRRQDTRDQAEEITTAARGQAMRR
GPEVETHVRRATEREGRRARRRRARELASNMPKHIDGMSSDDEVTEQQNLAFKQAKDEIDNDCKEIFSDVMEEYCTVRGI
LSKFESWRETDIDAYTEAYVSLCLPKIISPIVRLQLVTWNPIMESADIERTKWYNTLLLYAIDSKETEESLKRDPDVRLV
PSTIEKVVIPKLTSIIEKIWDPMSTSQTLRLVGTINRLIKEYPNLNDTSKQLETLFNAILDKIKAAVENDVFIPIFPKQV
WDTKHQFFQRQFAMAVKLLRNLLSWQGLLGDVQLKNLALGSLLNRYLLAGLRVSCPTEALFKANMIMSTLPRAWLQGETI
EHLRMFATLIQQLSEQLDQANPAHNGNVAQSFFNSGMEYEYSYNAISSTGVLVPSNAASSWSLNGKLIIQAENDYVTIQL
QSLKTSMWNGNVNETGTEIDIYDDALELLKPFQISYNKGLVENFSTEAESVWATNIKRSIAGILQLDLVNLEKQIAFQST
EINHYGKCDIDYVVSSEGEDQRLIRKSLDPRMCIGHPCRNWSNVPNVQCTDEDQNPILKSSERIYALQTDGTDHNIMSVN
ASGSIYVQPFQGMGEAHYHLVQQTIVLISKKRITKKIVTNNLRNTVLQHELPEEDLTQGRSTPDKDFAFKSISHLLDRLS
HRLENPGLDTEIHNLHNTTISVLLYYLGMLDRVDLDKAYNRISGTSYKEETVRNMFLEALPQVGSKESALFILDLIQKNK
VSDMSAIQLLMRLPFHIRKPDVQLLVSLQPFLALPSKISAQVQNTAILTYGTLIYKTCLVHCPYEMLDDYVRLYLDKFTE
TTQYGQKMIWLEGLANIQLGRVVEFLEPIASGNNAESRHFRVLAAWASLPTAPLRPDVIYPVYWPILINRTEHLEMRAAA
LTLLVVSSPTPNRLMSLYWYMQSEPNQHLYNYFYTMLKSMERTTYPCYKRIGRIAAQFSRILQKPTNGEYLVTGNYLMDY
QDSSRRFGAMLNGVIIANPSTNIPEVIYVTLNNYGSGTHINHVSLYVRAEGIFHSLATSAENPTNIKDILKEFKLNERQK
GPVHLEVIARIQDKTVLCVHWNETNIIDGLKHLSSLSDNMYHMYHNMEFHVNQQRINVPLTIESVQVTDFGTNVRLAMTG
TSLFSMRGNFTRDFPRRNNHVILRTSVHGIEIIENYNPLLDLWHGAERVQSLHGYLPINITIGLDEHPFISYNTLGGHLK
TGITAHAKTLTSVRGVNVKSKLERACRLCPASYTVTKSPSSNPKTVNIIDAGLPEIGGRLQVKVFDCESTVSQETLFNDI
WSSHRSNYQTWPSMKFTLIGLHFLDYLTYLPPKGSCGLAAYIESLESGPLQTKLEYLKNEKHHIFSFTHYNLESSKVLHQ
WNLAALYESTSSLSDVLKIKATEIVPDERVFKFCVEAERHVPWQWEFLSDKPSDSSRIKLNIVWGSSDTAKGKCNGSSVS
INLIGEISNEQFEESKKTNWPYGQCKKESTGKKFVPYTDACYEVSRELSTLRRYKIFAEYKNLPENLSKLVWKMYALYDL
IGGNSSNARKSDEPVIIATFPKESNVGELQLNGDKIAIEYNWRYIDIFLERTRIHKYMEIPLVRMFSSTCIITKNSIKSA
YNTVYTFAKNSEVILLGQCYDENPRLALTAANGAYGININLTDESGTTWITAGEDKGTLYNATSNIQLQSNHVFYTLGTK
KIKTGDNAIDILLPNIFLHMHWTQEQVLLFFPNHVLEFSCGICTLDHPNIDRLYEKV
Swiss-ProtPAX3- and PAX7-binding protein 1
KEGG     K13211     
SUPERFAMILYSSF48431  Lipovitellin-phosvitin complex, superhelical domain superfamily     
Gene3DG3DSA:1.25.10.20     
PfamPF07842  GCFC; GC-rich sequence DNA-binding factor-like protein     
SMARTSM00638     
ProSiteProfilesPS51211  VITELLOGENIN; Vitellogenin domain profile.     
CoilsCoil

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