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Gene detail [Fasta]

Species Linepithema humile
GeneLH14960
Positionscf7180001004838:328454..330546[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH14960
sequence mRNA: 
>LH14960-RA
AATACAAATATGAATTCTCCTAGCACAAGTACACAAGATACTGTGCAAAATTCAAAAGTGGAAAAGGATAACATTCTGTC
TGTTTATCATACACTAAGATTTTCAAAAGAAGATAAAAATTGTTTCGAGATTGCAGACATCGAACGCAGGTCTCTTGCCA
CGAAGTATATGACAACAAGATTATTTGATTCAGAGGATATGACAGCAGTACTCCTTCGAAAGGGTCTTGAAGATTATCAT
TCTCTATTGAGGGACGAACACGGAGTAAACAGTTACTGGAAACAGGTTAAATCTCAACTGCCTGATAGTGTAAAAAATGA
TCCATTGAAATGGAAATCGAAATTAGATGATGCAGACACTACATTGAGTTTTGTAAAATCTCTGAGTTGTCAAAAAATCA
ATACTCTACCTTGTAAAGGAAGATCTTACAGTGATGTAAACATAGAAAAAATAATAAATAGAGCAAAAAGGAAAGATGTG
CAGAAGAGAAATAGAAAAATCTCCTCACAGCTAGAACATTTTAAAACTGCGAGTTCTAATCAAATTTCAAATAAAGAAGT
TTTATTAAAGCCAAATAATGATAGTGAACAAAATGTATCTACTTATTTTTCAAGTATTCCCAAAAACAATGTTAGTAAAC
AAGTAAGTTACAACCAACGAAACACACCAACAATGCAATCAAGTAAGCAATCTTCTTACCCAAATTTGAACAAATTTGTA
CAGAAACTGCCTCCTAAATCAATGATAAAAAATGATAAAATATATAATAATAATGATAAAAATGATAAAAATGATACAAC
TAAAAGTCTCTATAGAACAATAAATCCACATGCACCAAAATTACGACCAGCTGAGCCTGTACAGTCTAACAATGAAGATA
CAGAAACAAGGAATACATTCGACAGCTTCAAGAGTGCCAGAGACGAATTATACATCCAAGAAATGAAGAAGAACAAATCA
GCGCCGAAGAAAACTTTGGGTGGCCGAGCAGCGGCCAACACTCCATTCGTCTGTCCACTAAAACAAAATAAAGAAAAATC
CGCACAAAATTACAATGCTGCACCACAAAATGAAACTGACGTGGAAGAGGACGAAAGACTGAGAAATATTGATCCGAACA
TGATCGAGCTAATTAGAAACGAGATCATGGACACAGGTAAAACGATAATGTGGGACGACATCGCGGGGCTTGAATACATC
AAGAAGATTGTCAAAGAGGTGGTGGTATTCCCCATGTTGCGGCCGGACATTTTTACAGGTCTTCGTCGGCCGCCCAAAGG
GATTCTACTTTTCGGTCCACCAGGAACAGGAAAGACTCTCATCGGCAAGTGCATAGCTTCGCAGAGCAAATCTACATTCT
TCTCCATTTCAGCGAGCTCGTTGACTTCCAAATGGATCGGCGATGGCGAGAAGATGGTCCGTGCGCTGTTTGCGGTGGCC
AGAGTCCACCAGCCCTCCGTCGTCTTCATCGACGAGATAGACTCGCTGCTGACGCAGCGTTCGGAGACGGAGCACGAAGC
ATCCAGGAGGCTGAAAACAGAATTCCTGGTGCAGCTAGATGGAGCGGCGACATCTGATGACGATCGCATCCTGATCGTTG
GCGCGACGAATCGGCCTCAAGAATTGGACGAAGCGGCGAGAAGACGTCTTGTCAAGAGATTATACGTTCCTCTACCTGAG
TTGGAGGCCCGCAAGCAAATAATAAACAATTTGTTGACCACCGTGCAACACAATCTCAATCAGGAAGATGTTGCGAGGAT
TGCGGAGAAGTCGGAGGGATACTCTGGTGCCGACATGACGAATTTATGTAAGGAAGCGAGCATGGAACCTATTCGAAGCA
TTCCTTTCAGTCAACTGGAAGATATAAAGATGGAAGAAGTGAGGCATATAACGAGCTACGATTTCGAGGAAGCGCTGATC
AACGTGCGGCCCAGCGTATCTCAGTCGGATCTGAATATTTACATCATGTGGGATCGTACTTATGGATCTGGCACCGCGCA
AACAAAGCGTGATAGTTAA
PEP: 
>LH14960-PA
MNSPSTSTQDTVQNSKVEKDNILSVYHTLRFSKEDKNCFEIADIERRSLATKYMTTRLFDSEDMTAVLLRKGLEDYHSLL
RDEHGVNSYWKQVKSQLPDSVKNDPLKWKSKLDDADTTLSFVKSLSCQKINTLPCKGRSYSDVNIEKIINRAKRKDVQKR
NRKISSQLEHFKTASSNQISNKEVLLKPNNDSEQNVSTYFSSIPKNNVSKQVSYNQRNTPTMQSSKQSSYPNLNKFVQKL
PPKSMIKNDKIYNNNDKNDKNDTTKSLYRTINPHAPKLRPAEPVQSNNEDTETRNTFDSFKSARDELYIQEMKKNKSAPK
KTLGGRAAANTPFVCPLKQNKEKSAQNYNAAPQNETDVEEDERLRNIDPNMIELIRNEIMDTGKTIMWDDIAGLEYIKKI
VKEVVVFPMLRPDIFTGLRRPPKGILLFGPPGTGKTLIGKCIASQSKSTFFSISASSLTSKWIGDGEKMVRALFAVARVH
QPSVVFIDEIDSLLTQRSETEHEASRRLKTEFLVQLDGAATSDDDRILIVGATNRPQELDEAARRRLVKRLYVPLPELEA
RKQIINNLLTTVQHNLNQEDVARIAEKSEGYSGADMTNLCKEASMEPIRSIPFSQLEDIKMEEVRHITSYDFEEALINVR
PSVSQSDLNIYIMWDRTYGSGTAQTKRDS
Swiss-ProtFidgetin-like protein 1
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF09336  Vps4_C; Vps4 C terminal oligomerisation domain     
SMARTSM00382     
ProSitePatternsPS00674  AAA; AAA-protein family signature.     
OrthologiGroup-00613    Fidgetin-like protein     

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