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Gene detail [Fasta]

Species Linepithema humile
GeneLH12822
Positionscf7180001004647:37564..48321[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12822
sequence mRNA: 
>LH12822-RA
ATGTCGGAACATCACCGCGTGGCGGGTGGCTGGGGCACCGCAAGCCCGGGTAATCGAGAGGATGCCTCCGGCGGTGCCGC
CTGGTGGCCTTCGGGTTTGAACGCCGTTTCGACCGAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAAC
AGCAACAAAATATACATCAACATCTAATGAATCAGCAGCAACAGCAACAACAGCAACAACAACAACAACTTGCTCAGCAG
CAGCAGCAACAACAGCCGCAGCACCATCCGGACATCGTCCGTAGTACCGCTGCCGCCGTGAATCAACAGCTCTTTTCCTA
CAAAATGGCCTCCAGCTTCCAGAATCCGGCGACCACCGGCACAGCGTCGAGTCCAATCTCGACGTCCTCGCCGGTCGGCG
GCGGCGCCGCATGCATGAGAGGTGGCTACGATTACAGGCTCGGTACAGCGCCAGGACCTGGACAAGGCGCCGCCACCGCT
GGCGGTGGTGGTGCGGGTACCGGCGGTGGCGGCGGCGGCGCCGCCGGCACACCTTCCGCACCGCCCGGTGTACAGTGGTG
GTATTCAGGGGCAGTCATGGACGCCGCCGCTCAGAACAACCTGCATCAGCAATTGCAGGGTCAACAACAGCAACAGCAGC
AGCAGCAACAACATCTTTCTCCAATTACCACGCAAACGTCCACGCCTCCCGTTATGTCCCCGCACCAAATACAGCAACTA
CCGCAAAACAATCTTCAACAAAATAACGCTCAGAGCTTGCAGCGAGACAATATGCCGAGAGGAAAAGATTCGAAGCCAAG
AGGACGGATGACAGCGTATGCGTTCTTCGTCCAGACATGTCGTCAGGAACACAAAAAGAAGCATCCCGAAGAGAAGATCG
TCTTCCGGGAGTTCTCCAAAAAATGCGCATTGAGGTGGAAGACTATGTCAGACATAGAAAAGAAGCGTTTCCACGAAATG
GCAGAAAAAGATAAGAAGAGATACGACGCGGAGATGCAGAACTACACGCCGCCTAAGGGGGAAAATAAGGGCAGAGGCAA
GAAACGCAAACACATCAAGGATCACAATGCTCCCAAGAGATCGCTGTCCGCTTTCTTCTGGTTCTGCAACGATGAACGCG
GCAAGGTGAAAATGTTGAATCCCGAATATGGCGTAGGCGATATAGCTAAGGAATTAGGCAAGAAATGGTCGGACGCAGAT
CCCGAAACCAAATCGAAATACGAGGCTATGGCGGAGAAGGACAAAGCTCGATATGAAAGGGAAATGACGGCGTACAAAAA
GAAAATGCAAAATGACGGTGCACCGGTGGTCGGGGGAGCGCCGGCGAATCAAACTGTAAAAAGCGACAGTGAAGAGGAAT
ATAGGGAAGACGACGAATAGCGGATGCACGTCGAAATTTCTTCATCTATCACCCCGTGTCCTTCATCCTGAAAGCATACC
TCACCTACTGTACGTACCATTGACCTTAGCGTGAGCGTACTTACACCACCATTTACTAGAACAAAGTAACTAACCACCAA
GCAACCAACCAACAAACCAAGCTCTCCAACAATTCCCACCAATCTCCTAATTTTTTTTTTTCCCGATTATTTACGATAAT
GATAAAGTTATCCGCGCTAATTACGATAATTATTTTAAAAGGAAAAACTGGTATGTGTGAGTGCTGCGCGAGCGTGAACG
ACAGAGCGAGAGAGGATTATTGTGTGCGTGAACATTTGTACTTTAACATATTGATAGTAAGGATGATGTAAAGTGGCTAG
TAGGATAGCGGAAGAAAGAAAAAAAAAAAGAAAACAGAATTATGACAAAAAAGCATAAAGCGGGAAGAGATAGATAAGAA
GCAGGCAGGGTTGCCCACACTTTCTCTATTCAAACGGAAGGCGCAGGGGCTCAATCATTGTTGACTTTGCTCTGTCGACG
CTATGTTGCGAGCTACGTAGTTTAGTTTACTAGTGACGAAACACCGCGATAATTGATTGTTCCGTAGCGAGGATCGTAGA
GACGATTGTCATCTCGCTGAGTTTTTGAAATTTCTTCCGCACGCAAAAGTTATTCTTTTCTTTTTCTCTGTCGTTCGTCT
CACCGTCTCGGAAATCGAATTCTCGGCGATATCTCATCGCTCTCTCGGATCCTCGTTCTCGAGAGGGACTGGTCGCGTTG
CGTTGTTACAAAATTAATATTGTATTGTATTTCGGGGATTTTTTTTGAGTTCAGTTTCAGTTGGGTTGAGTTTTATTCAG
TTCAGTTCAGTTCAGTTCAGTTCGGTTCAGTTCAGTTTAATTCAATTCAATCATCGCCGGCGTTGTTGTGACACAACGCA
TACGCTCATACTTGACAACACATGAACACACACACACACACACAACCACACACACAAAAACACACAGGCTATCATTGTAT
ATCCTTGTACAGAGAGCTTCGTTTCTTCTTTCGTATATTTTTAGCGAATCGATCATATTGAGAACGTGTGCCGGGGGCAT
GGGGCCGCTTTACGCATATTTGCGAATATATAATTGATTTGATCATGTTTCTCGTAGTAGTTATAAGTACGTTTAGAATT
AAGTGTACGTGTATCTTGTAATGCAGAATTTTGAATTCTCTGCGACTCTATGTTTTTTTAGCGTGCGATGTACTTTTTTC
CGACACACTACAGCGCTGTTATGAGCTACGAGCCACCACCAGTGATTGAGCCTTAATTATATAGCCGATGAGCCATCGCT
CGATGCAATGAATTGAATCGAGAGAGAAACTGCGTGCCAGAGAGGAAAAAGGAGGAGAGAAAGAATGTGTGTGCGTGTGC
ATGTAGCTCGCAACTTCTATTAGATCGTTGCATATGAGATGTCGCT
PEP: 
>LH12822-PA
MSEHHRVAGGWGTASPGNREDASGGAAWWPSGLNAVSTEQQQQQQQQQQQQQQQQQNIHQHLMNQQQQQQQQQQQQLAQQ
QQQQQPQHHPDIVRSTAAAVNQQLFSYKMASSFQNPATTGTASSPISTSSPVGGGAACMRGGYDYRLGTAPGPGQGAATA
GGGGAGTGGGGGGAAGTPSAPPGVQWWYSGAVMDAAAQNNLHQQLQGQQQQQQQQQQHLSPITTQTSTPPVMSPHQIQQL
PQNNLQQNNAQSLQRDNMPRGKDSKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCALRWKTMSDIEKKRFHEM
AEKDKKRYDAEMQNYTPPKGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEYGVGDIAKELGKKWSDAD
PETKSKYEAMAEKDKARYEREMTAYKKKMQNDGAPVVGGAPANQTVKSDSEEEYREDDE
Swiss-ProtHigh mobility group protein DSP1
KEGG     K10802  HMGB1; high mobility group protein B1     
SUPERFAMILYSSF47095  HMG-box superfamily     
Gene3DG3DSA:1.10.30.10     
PfamPF00505  HMG_box; HMG (high mobility group) box     
SMARTSM00398     
ProSiteProfilesPS50118  HMG_BOX_2; HMG boxes A and B DNA-binding domains profile.     
PRINTSPR00886     
CoilsCoil
OrthologiGroup-00742    High mobility group protein DSP1      

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