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Gene detail [Fasta]

Species Linepithema humile
GeneLH18427
Positionscf7180001004948:39695..42784[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH18427
sequence mRNA: 
>LH18427-RA
ATGTACAGACTACCAGCCTTGTTGAGAGGAACTGCTCTACGCCAGTTACAGACGCGTACTTATGCCAAAGATGTTCGTTT
TGGATCGGATGTTCGTGCCTTGATGTTACAGGGTGTAGACATCTTGGCAGATGCCGTGGCTGTGACAATGGGCCCTAAAG
GACGTAACGTTATTCTGGAACAAAGCTGGGGCAGTCCAAAGATTACAAAGGACGGTGTAACTGTGGCAAAAGGCATTGAG
CTAAAGGATAAGTTTCAAAATATTGGAGCCAAATTAGTACAAGATGTAGCAAATAATACAAATGAGGAAGCTGGTGATGG
TACAACAACAGCAACTGTATTAGCTAGAGCAATAGCCAAAGAAGGATTTGAGAAAATTAGTAAAGGTGCAAATCCTGTAG
AAATTAGACGAGGTGTAATGCTAGCAGTAGATAGAGTCACCGATGAGCTTAAAACTTTAAGCAAGCCTGTTACAACACCG
GAAGAAATTGCTCAAGTAGCAACAATATCCGCTAACGGTGACAAAGCCATTGGCAACTTGATTTCCGACGCCATGAAAAA
AGTCGGAAAAGAAGGTGTGATCACTGTGAAAGATGGCAAAACACTGACTGACGAACTAGAAGTCATTGAGGGAATGAAAT
TGGACAGAGGCTACATCTCTCCATACTTCATCAATTCCAGCAAAGGAGCCAAGGTCGAATTCCAAGATGCTCTCCTTCTT
TTTAGCGAGAAAAAGATTTCCTCTGTACAAAGCATTATTCCTGCCTTGGAATTGGCCAATGCACAACGCAAACCTCTCGT
TATAATCGCCGAAGATGTGGATGGTGAAGCTTTATCGACGCTTGTTGTCAATCGTCTGAAGATTGGATTGCAAGTGGCTG
CAGTTAAAGCTCCCGGCTTTGGTGACAATAGGAAAGCCACTCTTCAAGACATGGCGATATCCACTGGCGGCATTGTGTTT
GGCGATGATGCCAATCTCGTCAAATTGGAAGACGTTCAGGCAAGTGACTTGGGTCAGGTGGGAGAAGTCATTATCACGAA
AGATGACACTCTGATTTTAAAAGGCAAAGGAAAAAAGATAGATATCGACAGAAGAGCCGATCAGATTAGGGATCAAATCG
AAAACACTACGTCTGACTATGAGAAAGAAAAGCTGCAAGAGCGTCTGGCGAGATTAGCGTCCGGAGTCGCTGTTCTGAGA
GTTGGTGGCAGCAGCGAAGTGGAAGTCAATGAAAAGAAGGACCGTGTGCACGACGCACTCAATGCCACTCGTGCTGCCGT
CGAAGAAGGAATCGTTCCTGGAGGTGGGACTGCTCTGTTGAGGTGCATACCAGTGTTGCGACAGCTCAAAGCAACGAATG
GCGATCAGGAAACCGGAATCAAGATTGTGGCAAACGCTTTACGTATGCCGTGTCTGCAGATTGCACAGAATGCCGGTGTC
GACGCTAGTCTGGTGGTGGCTAAAGTGAGCGAGAGCAAGCTCGGTTATGATGCTTTGAACGATGAATATGTTGATATGAT
TGAGAAGGGCATCATCGACCCCACGAAGGTCGTACGTACGGCGCTCACCGATGCGGCGGGCGTCGCATCGTTGTTGACGA
CGGCGGAAGCGGTCGTCACAGAGTTGCCTAAGGAAGAACCCCAATCGCCAATGGGTGGTATGGGCGGTATGGGAGGAATG
GGTGGCATGGGCGGCATGGGCATGTAAAAAGAAAAACAAAGACTGAAAGAAAGATAGCCCATATTGTGGTGGTTATTAAC
AATGTTCTTCTTAATTATATACTATTTGTTGGAAAGTATTGCTTCATGCATGTTTCGTAAAAGAGCAGTACAAAAGTACA
TAATATTTAATATGTATTTAATATATAATGAATTTATATGTATATATTTCACCATACTATATACGGCAAGTCTTTTTTTC
ATTTTCAAATATTTCAGTGAACAGATGTGCACTGGGAGAAGTGTGTGATATTTGGAACTATAATTGCATAAGACTATAAT
TATAGTCGGAATACTTATTTTTATAGGAATTGTTACTACAATGTTAGCAATAATAACCTTATGTGTATAATACTGCCGAT
TATATAACTTACCATGGTTACTGCAATTATTCTTTTCTCTCGATATGAGAACAGCAAATTAATCATATGTGCTGTCATTT
CGTTCAAATGGAATTACATATTATGTAGAATCGATAATTGTAATACTATATATTATATAAGTAAAATTTATTTTGAACTA
TTTTTAAACAATTGACACTTGTGTGTGCTAATCAAAAGTTGTGTTTACATCTAAGATTTTCAAGATCGTTTATTGCTCTT
ATGCGAACTATGTACAAAAAACACTTTCAAATGAATGATATACAATTAAGAAAGTGTATATGTATAAGTTATTCTAGAAA
ATACAACTGTTTCATAAAGCCAGAAACAAAAATGAGCAGCCTTTCCATATGACATTTTATAGTTTTTCCAATTATAATAT
TCGTTAAAGATACAAACGTAAAAGTAAGTATATATGTCAATTGTCGGAGGCTGGTTATTTAGATATCTTATTTAGATATT
TCATAATTTTATAATTGTTAGATTTATTTTCTCTTTCTCAATAAATATTTAAATTACAA
PEP: 
>LH18427-PA
MYRLPALLRGTALRQLQTRTYAKDVRFGSDVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIE
LKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGVMLAVDRVTDELKTLSKPVTTP
EEIAQVATISANGDKAIGNLISDAMKKVGKEGVITVKDGKTLTDELEVIEGMKLDRGYISPYFINSSKGAKVEFQDALLL
FSEKKISSVQSIIPALELANAQRKPLVIIAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDMAISTGGIVF
GDDANLVKLEDVQASDLGQVGEVIITKDDTLILKGKGKKIDIDRRADQIRDQIENTTSDYEKEKLQERLARLASGVAVLR
VGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIPVLRQLKATNGDQETGIKIVANALRMPCLQIAQNAGV
DASLVVAKVSESKLGYDALNDEYVDMIEKGIIDPTKVVRTALTDAAGVASLLTTAEAVVTELPKEEPQSPMGGMGGMGGM
GGMGGMGM
Swiss-Prot60 kDa heat shock protein, mitochondrial
KEGG     K04077  groEL, HSPD1; chaperonin GroEL     
SUPERFAMILYSSF48592  GroEL equatorial domain-like superfamily     
Gene3DG3DSA:3.50.7.10     
PfamPF00118  Cpn60_TCP1; TCP-1/cpn60 chaperonin family     
PRINTSPR00298     
CoilsCoil
ProSitePatternsPS00296  CHAPERONINS_CPN60; Chaperonins cpn60 signature.     
TIGRFAMTIGR02348     
HamapMF_00600     

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