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Gene detail [Fasta]

Species Linepithema humile
GeneLH15238
Positionscf7180001004856:488193..491240[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH15238
sequence mRNA: 
>LH15238-RA
ATGCCGGCAGTCAGCGTTTGCGATCCTATTGCGGCTAGGCTTCATTGCGCTTTGAACAGCAATCCCTCTAAAACAACAGA
TGATCTGTCGATTGAATTAGTCAGCAACGCATCTAGAATTATGCAAACGGAAATCCATTATGAAGAACTAAAAGATTATA
AAGCGACAAGTCAAGTGCAGGCTAATTGCAACATTTTTCTCAATCTATCCCCTTCTGAGAAGTTAGAGGAAAACAAAGTG
AAAGATGGCGTGAATTATAAGAAGAAGAATGATACGAATAAAGGACCGGTCTTGCCAGAACCGGCTGTCACTTTGTATTC
TCCTAAAAAAGTTCATCTTGGATGGAAAGGTACATTTCCAGTCGGAGCGGGCATGTACAATGTCGGAAACACTTGTTATC
TGAATAGTACTCTTCAGGCATTATTTCATGTTCCGGCTCTTGTCAACTGGCTGCTGTCCGATCCACATCACAATTCCAAG
TGCGAACAGAATGATGGCGGCGGGGAATGCCTTACATGCGCAGTGGCCAAGACTCTGCAGTTCAGCCATCAGAAATCTGG
AGGTGCGATCAAGCCGTTTTACATATATAATAAACTAAAGCTCATTTGCCGAACTATGGTGCCTGGACAACAAGAAGATG
CTCATGAATTTCTACGTTATTTATTGGAAGGGATGGAACGCGCGTATTTGACTAGGCATAAAGCAACTAAATTGGATAGC
TATTCTAAGGAAACAACACCTATTAACCAAATATTTGGTGGCTATATACGTACTGAAGTAAAGTGCCTGCAGTGTCATCA
CGTGTCTACTACATTTCAACATTTTCAGGACTTGCTTGTGGATATACGCAAGGCCAATACATTGGACGAAGCATTAAATA
GTTACTTCAGTAGAGAACAATTGGATAACAATGATTATAAATGCGAAGCCTGCAAAAGAAGAGTTCCTGCCACCAAACAA
TTCACTTTAGAACGCCCGCCGAAAGTATTGTGTGTACAGTTGAAACGATTTAGCGTTTTAGGCGGGAAGATATCTAGACA
CATCGGTTTTAAACAGACTATAGACATGGGTCCGTACTTGTGGAGGGAACCGGGAGAATCCCCCAAGCAGCTCACGTATA
AACTCATGTCGATGGTAACGCACATGGGCCCCTCCGTGAACTGCGGTCATTATACGGCGGTCGCGCAAGTATCGAGCGGT
CAATATTATACCTTCGATGATTCCCTCGTTCGTCCAATAAGCCTTAATAATATATTAAGTACAAACGCATACATTATGAT
TTTCGAAATGGAGAATTACAGCCAGAATCAACAGACTGCGAAAGTGAACGGCACGACATCCGCGAAGAATGTGTCGACTT
CGCTACCTAGCTTTACAAATAAATCACTCGTATCCAAAGCGTCGACGTCCGCGGGATGCTCCGCGAACGGTTCGTCGAGC
GAATTGTCGCATGACGATTCGAGCAAACCATTGATCGGTCCGCAATTGCCGCCGCAAAGAAGCATAGAATTAAATCTTCC
TCTACAGAAGTCCAGCGACGCCGTTAACGCGCAGTCGCTTCAGAAAATGCAAGAGAAGTCGCAGCCGAAGTTGGTATTGC
ATATTAAGAAGCTTACGAACGGAAACAGTTTGGTGCCGTACGATGGCTCCAGCGAGGAGGAAGATAATAATTGTCTCTCT
GGAACGGGGACTCCAAAGAATCAAACTACAAATACCTTATCACGAATTAACGCCACGAACGGTGTGCCAAAATATCCCGT
TGCGAAGGATGCATCGAAAGTTATCCCCACTTCCAAGGAAACGCAAAAAATCAATCTCAAGACGAACGGCGTATCGACGA
CGACAATGACGACGCAAGCTACGATTGTACAATGTGCAAAGGCGCAAAATGGATCCAACAGCAATGGACGGATTAGTTTG
CTGAAGCATCAGAACGGGAAAACGGAAACGAACGGCCAGTCGGAACAGCGCGACAAGGATACGTGGCATCAATCCGTCAG
AATTAAAAATGGACAAGAGGATATAATACCCACAAAGGCGAGTAGCAGCGTCAAGAACTGGCAAGGTTCTAAGAATACAT
CCGCCACGTACACTGGAACATCCAATGGATGGTCGCTATCGGATAACAGGGAAGACGTTAAGTCAAATCAAAGTACAACA
CCGAGCGCTGCGGCCGTGCGTGATTTTAACGGCACCAATCGCTCGGATACCCTTTCACACTTGCAGAAAATGTCGCACCG
CGGATACGGCAATTCCTCAGTAACGAACTGGAACGGTAACAGAACGCAACTCGACCGCGACGTCGCTAGCGACAAACGGG
ATGAGCGCAAACGTCACTACAACTCGGACGACAGCATGATAGATAAACCTCGGCCGAAGAAGAGCAAGGACCACAATCGC
CGATACGAGTCTACTGCGAAGTATAATTCATTCCAAGATTTCCAAAACCAAAAGTACGGCAAAACCTATCGATCGATAGG
AATAGGGTATAATAATAATCGAAGATACAACTATTACAATACTTCCTATGCGCGATCGCGGCATGGGAACAACTACAGAC
AACCTCCTCATTTTAGATATCACTCACACAACAGATTTGTATAG
PEP: 
>LH15238-PA
MPAVSVCDPIAARLHCALNSNPSKTTDDLSIELVSNASRIMQTEIHYEELKDYKATSQVQANCNIFLNLSPSEKLEENKV
KDGVNYKKKNDTNKGPVLPEPAVTLYSPKKVHLGWKGTFPVGAGMYNVGNTCYLNSTLQALFHVPALVNWLLSDPHHNSK
CEQNDGGGECLTCAVAKTLQFSHQKSGGAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMERAYLTRHKATKLDS
YSKETTPINQIFGGYIRTEVKCLQCHHVSTTFQHFQDLLVDIRKANTLDEALNSYFSREQLDNNDYKCEACKRRVPATKQ
FTLERPPKVLCVQLKRFSVLGGKISRHIGFKQTIDMGPYLWREPGESPKQLTYKLMSMVTHMGPSVNCGHYTAVAQVSSG
QYYTFDDSLVRPISLNNILSTNAYIMIFEMENYSQNQQTAKVNGTTSAKNVSTSLPSFTNKSLVSKASTSAGCSANGSSS
ELSHDDSSKPLIGPQLPPQRSIELNLPLQKSSDAVNAQSLQKMQEKSQPKLVLHIKKLTNGNSLVPYDGSSEEEDNNCLS
GTGTPKNQTTNTLSRINATNGVPKYPVAKDASKVIPTSKETQKINLKTNGVSTTTMTTQATIVQCAKAQNGSNSNGRISL
LKHQNGKTETNGQSEQRDKDTWHQSVRIKNGQEDIIPTKASSSVKNWQGSKNTSATYTGTSNGWSLSDNREDVKSNQSTT
PSAAAVRDFNGTNRSDTLSHLQKMSHRGYGNSSVTNWNGNRTQLDRDVASDKRDERKRHYNSDDSMIDKPRPKKSKDHNR
RYESTAKYNSFQDFQNQKYGKTYRSIGIGYNNNRRYNYYNTSYARSRHGNNYRQPPHFRYHSHNRFV
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 36
KEGG     K11855     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
ProSitePatternsPS00972  USP_1; Ubiquitin specific protease (USP) domain signature 1.     

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