Warning! We strongly recommend Internet Explorer (9.0 and later) and Google Chrome for better display.

Gene detail [Fasta]

Species Linepithema humile
GeneLH15215
Positionscf7180001004856:368497..376768[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH15215
sequence mRNA:
>LH15215-RA
ATGATTAAAATATCGGCACTCAACGAAGAGTCGAGCGAGGAAAGCGAGGAGGAGGATGTGCCTACGATCACAAAGGAAGC
GCAGGAACAAATAGCATTAACGGAATACAACAAGGCCTTAGAATTATTGAAGGAGAATAAGCGAGAGGACGCATTGGTTA
CTTTTAAGAATCTTTTGGAGACTGAATTGTTGGACGAGGTAGAGAAGCCCCAAGTACCAGATGGCAGATCCAGACCAATG
TTAACGTTGAAATATTCCTGCTTCAAAAACATTGGTGCCATTCAAGCAGCTTGTGAGAATTATGTGGACGCCATCGAGAA
TTATTGGGAAGCTGCAAACTTGGATGATTCCGACGTAACGCTGTGGCATAGAATCGGTACATTAGCGATAAAGATTTCTA
ATTTAGAATTAGCTTGTTCGTCTTTCAAGCAAGGTCTAAAGTGTAATTCCAATCACTGGCCCTGTTTGGACAATTTAATA
ACTGCCTTATATGCCGTTCCTGATTATATGAACTGTCTGTTATATATTTCCGTGGCATTGGAAAAGGATCCCAATTATGT
CAAGGGACTTGCTTTTCGTGACAGGATATTCAAAGACATTCCATGCCTGGAAGAGTGTTACAAACTGTACAATAGTGATT
GGCAATTAGATCCACCTTTAGATACCGAATATGATCATGTGTTAGGTGACAAGTTGTTAGCAGACGCAAAAGAGATTTCT
GTAAAATGGGCGGAGGCTTGTAAAGCAGACTTTAAGCCAAAACCATTGCCAGAATTGACCTTAAGAATGCCTTTAACAAA
CTACACATGGCTGGCTCTTGGTGAAAGCCTAGTAGACATGCATAGGTATATAAGTGAAAACGATTTGAACTTTGTTAGTA
GAATTGTATTATCGGTTCAAAAATTTGATGACAAGAATACAGTTGCGAACAATGAATGCGAAATCGAAGAAAGTAATGTT
ATGGAAATAGATGAACAGAATATGCAGGATTCAGCTCCGAATGTGGAAAACGATATCAATAAATCTGTTAAACTTGAAGC
AGAAGATTGTGAAATATCAGATGACAATCAGGCTTTTAACACAGCCTCCGATATCGCGATGGAAGTTGAAACTGAAGATG
ACAAAAAGTCATGTTCAACCGACGTGCAAATAATTGAGGATGAAGATCCATTAAGAATGTCTGACACAGATGGTTTACAG
TGCGAAGAACAAAGTGAGACAAAGAACATGGATTCGGAGGAACATATGCAATCTGAAACAGACGCGAATGCTGACAAATT
GGAGAGTGACAAAGTCACAGACGATGTTTACAGCATGGATAACGGAGCGCCCAACGAGAAATCCAGCGACAAGGAAAGTG
ATAAATCGAGTGACAAAGTTTCGGAAAAAGGTGCCGAGAAAGCGAACGATGCAACGAATAAAACAGACGATAAAACTCAC
TCCGAGAAAACCGACGGAAAGGAAGAAGGACAGAAGGTGAAGAAGAGGCGCAGAAGCGCGTTGTGTTTCTTGCAACAATG
GGCTTGGAGTTGCAGTAGCATGAGACGATCCGCCAGAGTCAGAGGTTCGAATAGAAGGGAGGCAGAAAGGGACGATGTTC
AGTTAGAGGAAACACTTAAAAGACTGTTTCCTAGTAGTTTGTTATCCGATACAGTAAGATTGACTAAAGATGACGCGACT
CGCAATCCGGATGATTCTATGGACACTATGGATATGTATCAGTTATTTGCAAACCAGGAGAGAAATCGTAATACGGAAGC
CTTCAAGAGCTCGGAAAGTTCCAAATCACCAAGCCCTGACTCGAGACAGCAGAAATACTTTGAGACAGAAGCAGAAAATA
CTGATGTGGATGCATTTATAAATGAGCATAGCGGCAAAAGTAATTTAATGATAATTCTCGCTAAATTTGCGGAATTTCTA
TGCACTAAATGGAATCAGGAATGGCCAAAGGGAATGTCAGATGTTTATGTACAAGCGTACATTTTTATGAGGCAACATAT
TCCACATTTGTCACCGCTTGATGAGGACGTTAGTGACAAAACTCTAAAGTTAGATACCGAAATGACATTGTTATTCGGGG
AGCTTCACACAGATAAATGGTTAGACAATAAATCTGACACTTTATCAAGTTCAACGTTAGATAAACTTGGTACTGGGATG
CCAGCAGAGGAATTAGGACACATAATATTCACAAGTGTTAGACAGGATCTTCTACACGAGGAAAATTTATATACTTTACT
AAGAATTTTGTGGCTCAAAGCTAATATCTTTTTGTGTCAAGGTGATATAGATGTAGTAATAGAGACGCTAGAACTGTTGT
TGCATCGTCTGCAAGAAATGGAGAGCAGAAGCTTAAATCCATGCATCACACTTTTAAATTGTAACAATAATTCTCAAATT
AGTGCCAAACTTGTAAAGAGAAAACTTACATCAATTCAAAGGGGTCAAAAATTAGGCGAAATCCAACATTTGTACGACGA
GAAGAAATATATGGAACTGTCTTGCATTCTACAGGACACTTTCAAGTTCGCCAAGCAGAGGCACAAATTGTTGGTAACCA
ATGAAAACATCGTTGACAGAGTTCGACAATTAGTCATGCTACTCGACAGCTTATGGCAGCTTCAACAATACGAGGAATGT
TACGTCTGGGCAGAAGCTTGTCTCAACGAGTCCTGGCAAAATTACTTGAGCTGCTCTGATGAAGCGGAACAGAAGAAATG
GACGAGTTCGACGGTAACGGCACTTGAAAAATTGGAAGCTTGTACAATCCAAGTCAGCGTATTTGTCGTGAAATATCTGC
CGGAGTCTCGTCTGACGAGGTTGGTGCAAAATTTAGTTCACATCGTTTGCCATCAATTGGACGTACCGGAGAACGCTGTG
GAGATGCCTCTGGAGACCGTTCTACCCTGGATCCTGCTGCACTACATTCTACAATACGAGGAGGACAAGGAGAGAGCAAA
GGCTGAATCCTATAAGAATAAATTGCACAGCTCTCATCACTCCGAATCGGATGATGAGGACGACGGCATTCCACCGTCCA
TCATGATTCTGTTCACTGCCCATGAATTCATCGGTCGACACTCGTGGTGCTGCTTCAACGAAGCGAAGCTCCTGTTCTTC
ATCATGAATCTTATTATACCGCAACTCGAGACGCCGCAGTACGCGTCTATCAAGAATAGACTGACGAAATATCTGGAACA
GATATTCTTCTGCCTTTATGGTCATCCGAACAAGGTGAGCACAAAGCGGAAGTATCTGCAGGATCACGGAGTACCACAGA
TGGAATTAACCTGGGAGGGCGCGCAGCTGCTGTTCGACTTTTACAAGCCGAAGCAACTGCCCAACTTTCAGTCGCCTAGA
ATTCTTTCCATCAGCATGGACACGGAGATGCTGTTCAAGAGGGTGATCAGATTGGTTCCGCAGGAGAGTGATCCGAATCA
GATAGTAGACGAAATGACGGCGTACATACTCGGCACGAAAGAAAAAATGCCGAGCGTGACGAAAGCCTTGCCGCATGCGA
CATGTACTATTTACTATTTAATGGGTGACTTTTATTTCAAGAACAACAAGTGGGAACAGGCCAGTCGGTATTATCTACTA
GACTTGTGCTTATATCCAAGGGGTCTGAATTCCTGGGCAGGTCTAGCCATGGCGACAGGCAGCATAATAGAGAATTGGTT
GAACAGCTACAGACCTATAGGAAAAGATAAGTTTCTGAACAAGGCAAAAACGGCGCAATCGAGTTATCAGCACGCCATTG
AGCTGGCGCCTGGCCATTCCGTAATTTGGACCGAGTATGGGAATTTTGTTTATATGGTTCATTCGTTTTGTTCGCGATTG
CTCAAGCAAGAAACCGACACATTGAGCATGGAGAGATTTGAAATTCTAGAAACCAGAAAGGAGGAGATGCTGGAAATTGC
GGATCAGTGCTTCGAATCTGCAAATCGGATATGTCAGACTATCGAGGAACCAACTATACAGCACGATGAGAGATGGCTCT
ATCAATATATGCTGGGTAAAGTTGCGGAGAAAAAGAATCAAGATCCTCCTGTGTTCTTGGAACATTACGCAAAGGCTAGT
GAATTGTTATATGAGAATAACGCTCAATATCCACGTAGAATAAGCCACAAAAGTCCACAGAATTTATCTATAGAGGCGCT
AGAGGTTCATTATCGCATTCATGCGAGTATACTGAAATATTTGGAGCAGCATGAAGGAAAGCCGCTGAAGAAGTCATTGG
GTCAGTTGTTTCTTTGGCATTTGAAAAATTGCTCGGAGGGGCCCTTCATGAAGTATCAGTCTAAACTCAACGAGAAGAAA
AAGGAAGAGAACGCCGACGTTGAGAAGAGTACGTGGAAGGAATCCGACAGTGCAGCCGATACGAATAAGAATACAGTAGC
AGTATGTCAACGCTCAAATAGTATCGAAGAGATAGAAATTGTAGATAGATCGAATAAAACTTCAGATATTAAGTTTACAG
AGCCAGGAAAGTCCGAAAATCGCAAGAGACTTCCTGACGAACTGTCGAGCGACAATACAAAGAGAATAAAATTGAGTAGC
GTTTCGCACTTGCAATTAATGCAGGATGTCGTAGCTTTAATAGACGATTTAATCACTAAAGTTTGCGATATGGTGTCGCA
AAAGGAGAAAACGAGCGGCGATGAGGTACTCATCACTCTGTCTAGTGATGAGAGTAACGAGCCGAGATTGCAGAAAAAGA
AGATAGAAAATAAGAGTGCTGACAAAGCCAAGCCGTTGACAAAAACAGAGGAGAACAAGAAAGGCTCAGTAAATATAACG
ACAATTGATCCCGAACGAAAGTCTGACAATGTACAAGATTTAATGGATGCTCTCATGAAACAGGCAATGGAGATTAGCCA
GGAAACACAGCAGTCTTCGGCGGATGACGAGGACACCAGAAGATTCGATGGCAAATGGCTGCAGAACGAAGACTTACAAC
CTACTGAAAAAAATTGTAAAGACAAGATACCGGAGAAGAAAAAGACACAAACTAACGCAAATGAAGAAGCGACTCTGAGT
AGAAGAGGCTCTCAGGAAAGCACCACGACTACGCAAACCACAACTACGACCACGGAGACGAACAATTCTAGTTCTAGTAG
TAGCGAGGATTCTACCAGTAGCGACGACAGCTCCGACACTGACAGCACCAGTGATAGCGACAGCGAATCCGTGGACAGCG
ACGCCGATAAGAAGAAAAAGGATACCGACAATATAAAAAGCGAAGAACAGATGCCGGAGGAAGAAGTGGCCACGTTAATC
GCGTATTGCTTAGCTGGTTTGGAACAGTGTGTATTGAGATTTACAGAGCATCACAAGTCCTTTTACAGACTTTCACACTT
CTTCTTTAATAACAAGAAGGCAAAGGATACCGCGAAGTGCAAGAATCTCTTATTAGGGACGTACACTTGTCAATTCTACC
CTGGACAAACTTTTCAAGGACTTTTCGCTGAGAGGAGGAGCACCAACTTTTTTAATGTGAGTGTTTTTATAATTGTATAT
GCGTAG
PEP:
>LH15215-PA
MIKISALNEESSEESEEEDVPTITKEAQEQIALTEYNKALELLKENKREDALVTFKNLLETELLDEVEKPQVPDGRSRPM
LTLKYSCFKNIGAIQAACENYVDAIENYWEAANLDDSDVTLWHRIGTLAIKISNLELACSSFKQGLKCNSNHWPCLDNLI
TALYAVPDYMNCLLYISVALEKDPNYVKGLAFRDRIFKDIPCLEECYKLYNSDWQLDPPLDTEYDHVLGDKLLADAKEIS
VKWAEACKADFKPKPLPELTLRMPLTNYTWLALGESLVDMHRYISENDLNFVSRIVLSVQKFDDKNTVANNECEIEESNV
MEIDEQNMQDSAPNVENDINKSVKLEAEDCEISDDNQAFNTASDIAMEVETEDDKKSCSTDVQIIEDEDPLRMSDTDGLQ
CEEQSETKNMDSEEHMQSETDANADKLESDKVTDDVYSMDNGAPNEKSSDKESDKSSDKVSEKGAEKANDATNKTDDKTH
SEKTDGKEEGQKVKKRRRSALCFLQQWAWSCSSMRRSARVRGSNRREAERDDVQLEETLKRLFPSSLLSDTVRLTKDDAT
RNPDDSMDTMDMYQLFANQERNRNTEAFKSSESSKSPSPDSRQQKYFETEAENTDVDAFINEHSGKSNLMIILAKFAEFL
CTKWNQEWPKGMSDVYVQAYIFMRQHIPHLSPLDEDVSDKTLKLDTEMTLLFGELHTDKWLDNKSDTLSSSTLDKLGTGM
PAEELGHIIFTSVRQDLLHEENLYTLLRILWLKANIFLCQGDIDVVIETLELLLHRLQEMESRSLNPCITLLNCNNNSQI
SAKLVKRKLTSIQRGQKLGEIQHLYDEKKYMELSCILQDTFKFAKQRHKLLVTNENIVDRVRQLVMLLDSLWQLQQYEEC
YVWAEACLNESWQNYLSCSDEAEQKKWTSSTVTALEKLEACTIQVSVFVVKYLPESRLTRLVQNLVHIVCHQLDVPENAV
EMPLETVLPWILLHYILQYEEDKERAKAESYKNKLHSSHHSESDDEDDGIPPSIMILFTAHEFIGRHSWCCFNEAKLLFF
IMNLIIPQLETPQYASIKNRLTKYLEQIFFCLYGHPNKVSTKRKYLQDHGVPQMELTWEGAQLLFDFYKPKQLPNFQSPR
ILSISMDTEMLFKRVIRLVPQESDPNQIVDEMTAYILGTKEKMPSVTKALPHATCTIYYLMGDFYFKNNKWEQASRYYLL
DLCLYPRGLNSWAGLAMATGSIIENWLNSYRPIGKDKFLNKAKTAQSSYQHAIELAPGHSVIWTEYGNFVYMVHSFCSRL
LKQETDTLSMERFEILETRKEEMLEIADQCFESANRICQTIEEPTIQHDERWLYQYMLGKVAEKKNQDPPVFLEHYAKAS
ELLYENNAQYPRRISHKSPQNLSIEALEVHYRIHASILKYLEQHEGKPLKKSLGQLFLWHLKNCSEGPFMKYQSKLNEKK
KEENADVEKSTWKESDSAADTNKNTVAVCQRSNSIEEIEIVDRSNKTSDIKFTEPGKSENRKRLPDELSSDNTKRIKLSS
VSHLQLMQDVVALIDDLITKVCDMVSQKEKTSGDEVLITLSSDESNEPRLQKKKIENKSADKAKPLTKTEENKKGSVNIT
TIDPERKSDNVQDLMDALMKQAMEISQETQQSSADDEDTRRFDGKWLQNEDLQPTEKNCKDKIPEKKKTQTNANEEATLS
RRGSQESTTTTQTTTTTTETNNSSSSSSEDSTSSDDSSDTDSTSDSDSESVDSDADKKKKDTDNIKSEEQMPEEEVATLI
AYCLAGLEQCVLRFTEHHKSFYRLSHFFFNNKKAKDTAKCKNLLLGTYTCQFYPGQTFQGLFAERRSTNFFNVSVFIIVY
A
Swiss-ProtCalcineurin-binding protein cabin-1
KEGG     K17613     
SUPERFAMILYSSF48452  TPR-like superfamily     
Gene3DG3DSA:1.25.40.10     
SMARTSM00028     
ProSiteProfilesPS50293  TPR_REGION; TPR repeat region circular profile.     

You might be interested in these researchers

You might be interested in these references