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Gene detail [Fasta]

Species Linepithema humile
GeneLH12574
Positionscf7180001004626:50390..58192[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12574
sequence mRNA:
>LH12574-RA
ATGGCGGACGATTCGAGCGTACGCGTCGCCGTGCGAATAAGGCCTCAAGTAGCCCGCGAAGTGATCGATATGTGCAGGAT
TTGTACTCAGGTACCTCAAGGGGAGCCGCAGGTCTTCCTCGGCCCCGACAAGGCCTTTACGTATGATTACGTTTTCGATA
CGCAGTCGGATCAGAGCACGATTTACGAAACGTGCGTGAACCGTCTCGTGGAAGGCGCGCTGGACGGCTACAACGCGACG
GTCTTCGCCTACGGGCAGACCGGCTCGGGCAAAACCTACACCATGGGCACCGGTTTCGACGTCGAGGTCGACGAATTCAT
CGTCGGAATAATTCCCAGGGCCATTCAACACCTGTTCAACGGAATAACGGATAAACAGGAGCGCGCGAGGGAACGCGCGC
AAATGCCTCCCGAGTTCAAGGTCACAGCGCAGTTCCTAGAATTGTACAATGAGGATTTGAAAGATTTGCTGGAGCCGGGA
GGCCCGAGAGGCGGTGCGCGCATCCACGAGGACACGGCGGGCAATATACATTTAGCGGGGGTGGAGCCGCGCGTCGTAAC
CAGCCCCGAGCAGGCGTTGGAGTATCTCCGACTGGGCGCGCTGTCGCGCACGACAGGATCCACGCAAATGAACACGCAGT
CGTCCAGGTCGCACGCGATATTCACGCTGTACATCAAACAGCAGAGGTGCATCAAAGTCGAGGATCCCGACGCGGACGTC
GACACGAGCGGCGTCGAGCTGGCGAACGAGTTCGAAACTTTAACCGCGAAGTTTCACTTTGTCGACCTGGCCGGCTCCGA
AAGACTGAAGAGAACGGGCGCCACCGGCGACAGAGCGAAGGAAGGCATCTCTATAAACTGTGGATTGCTGGCTTTGGGCA
ATGTCATTTCCGCTCTCGGTGATAAAACGAAGAAAGCCTCGCACATACCGTACCGAGATTCCAAGTTGACGAGATTACTC
CAAGATTCTCTCGGAGGAAACAGTCAAACCGTTATGATAGCGTGTGTGTCGCCGAGCGATAGGGATTTTATGGAGACCCT
GAGCACGTTGAAATACGCGAATCGGGCGAGAAATATAAAGAACAAAGTTACAATCAATCAAGATAAGAGCTCGAGAACGA
TCGCTTCGCTACGACGAGAAATTCAACAGCTTCAATTGGAATTGATGGAATATAGACAAGGCAAGAGGGTCGTCGGCGAA
GATGGAGTTAACGATGCCTGGCACGAGAATCAAATGTTGAGCAGCGAATTACAAAGTCTTCGGACCAGAGTGAAAGCACT
TTCGGAAACTGTTGAGGCGTTGACCGCTAAAAATGCTCTTTTGCTGGCGGAAAAGGCAACGGGTCAGTGGATGGCGGCAT
CCGGCGGAGGCGATGATCAGGTGACTAGTTTGGTGCAAGGATATGTTCAAGAAATAGAAGAATTAAGAGCCCGTCTACTG
GAAGCGGAAGCTATGTATCAACAATTAAAAAAGAGGCAGATGCAAGTTAACGCGGCAAATCCTTACGGCGACAGTTCGTT
TCATTCCGATTCCGCGTCCGTGTTGTTCGACGCTAAGAAGGACGTCGAGAAAGAAATAGAGGCGTTAAAAGTCTTAAAGG
GGCAGTACAGCGGCAGCACGATCGCTAAACCGGACGAAGGAGAAATGGACGATACGGAGAATGGCCAGGACTCTGTAAGC
GAGGATGATTCGGACGACGACTCCGATCAGGAAGACGAAGAGGAAGCGGCCATGGGTCGCGAATTGGAAGCGCTAACGTC
CGACATCGATGTGAAGCAGCGCTTGATACAAGAGCTCGAGCTTTCTCAAAGACGTCTGCAAACTATGAAGCAGCATTATG
AGGATAAATTGGCGCAGCTGCAAGCCCGCATCAGAGACACGCAAGAGGAAAGAGATAAAGTCTTGCTGTCGCTGCAACAG
CAACCCGCGCCGCCCACTGAGAAAGTGAAAAAGTTACGCGACGAGTATGAGAAGAAGCTGTCCAACATGCAAAAGGAGAT
GCGGCTTCTTCAGTCTGCTAAGAAGGAACACGCGAGATTACTGAAGAATCAATCTCAGAATGAAAACAGACTGCGAGGTC
TTAGAAATGAGCTGTCGGAGATGAAGAGAGCCAAAGTGAAACTGTTGAACAAGATGAGAGAAGAGGCTCAGCGGCACAAG
GAAAACGAACTGAGGCGTAATAGAGAAATAGCGCAGTTGCGGAAGGAAAGCCGCAGGCACGCGAACGTCATCAGAACGCT
GGAAGCCGACAAGCGAATGAAGGAGGTTGTGCTGCGACGTAAGCAAGAGGAGGTGACGGCGCTGCGGAAGAGAGACAGAG
GATTGAGTCAGAAGGCCGCGGGACGCACGCCGGTGAAACCGCTCAATCCCAAAGCGATGAAGCAGAGGTGGCAGACGTTC
GAGAGAACGATCACCAAGCAGGCGATAGCGAAGCAAGCCGCCGCGGAAACGGAGAGAGAAATGGAAAGACTGCTTCAGGA
GAGGCAAGAGTTGGGAAGGGATTTGGAGAAGCTTCAGAAGCATAGAAGTCAGATCACGAGCACGAGAGGTGACACTGTCG
ATATCGACGAAGAGATCGACAATGTGAAGAGCAAAATCAGCTATCTGCAGGACAGCATCGCGGAGTGTCAACGAGACATG
GTCGAGATGGGCGATGGCGAAGCGGAGGGCGAGCCGGGCGTCGAAGCGCTCATCTCTACGATCCGAACGGTGGACGAGGC
GCAGTATCTACTCCAGCGGATGCTCGCGTTCACCGTGGAGCAAAGCTGCATAGCCGCGCAGAAGCAGCTCGAGGTGCGAG
ATATGGAATCGCGGCTGAATCAGGTGGCGCAAGAGAGCGACGTGCAACACCAGTTACTCGAGCACGTTCTACGCGACAGA
GACCTTTTGACGCTCACGAATAATCAAAACAACGCGCTAGCTTACAGCCCGGCGAGCTCGAGAAGTTCTTCTCCCGACAC
TGAAAGTTACAGCCAAATTATACTCGGTGAAGAGAAGCCGCGCAATAGTAAGGTCAGAAGAAGAACAACGCAGCCGCAAG
AACTGCTCTACGGTATTCACACGCCTGAAAACATGAAGGCGGACGATCAAAATCAAAATCACAATCACCCTCTCACAAGA
GTCCCCAGCGCGCCAGGCAGCCTCAAAGGATTAGTGTTAACGAGAAATCAGCATGGTAATACCGGCGGATCGCCAACCCT
GAGCCGTCGTGACAGCACATCGCCCCGAGCTCTGCGACGGCCGATTCACCCGGGTGGAGGTTCCATGGAGCAGGTAGCGC
ACACGGATATATCTTCGCCGCCCGGATCGCCGACCACGTATAGGCGATTCAACAGCCGCGAAGAGAACGTGTTCTCCAGG
CTGACCGCGAGCAGGCAGCCGATCGCCTCCGAGCCGCAGCCGATGAAGGGAATCATCTCGCAATATCAGGGCAAGGTGCA
ACCGCGGGCAATTCTGCAATGCTCTCACGTGGCGGAAGGACACAGCAAGGCCGTCCTCACTATATGCGTGACGCCCGACC
TGCTCTTCAGCGGCTCGAAAGATCGCACGGTGAAGGTGTGGGACTTGAGAACGGGAATCGAAAGCTTCACTCTAAGCGGA
CACCCGAACAACGTCGTCGCCGTGAAGTACTCCGCTGTTCACCGGCTCCTGTTCAGCGTCTCCTCGGCGTACGTGAAGGT
TTGGGACTTGAGAGCCAGCAACGGCTGCATAAAGACGCTGTTCTCGTCCGGCCAGACGCAGTCCGGTCCCATCGCGCTGT
CGACTCCGTCCAGGATACTCCAAGTCCCCGTGGGCGAGACGACGATCAACGACCTGGCGCTCAGCCTCGACGAGCAGGAG
CTGTACACCGCGTCCAGCGACAAGGTCCGCATATGGGATCTTCGCAAGTTGGCGTACACCGCCAGATTAAGCACGCCGCA
CACAGCGGCGGTTATGTGCTTGGCCGTCGCCGAAGACGGCCGAGTGATAGCCGGCAGCAAGGATCATCTGATATCGCTCG
CCGAGCCCAATGTGTCCGGGCCGTCCATTAGCTTGGCGCCGCCGCACTACGACGGAGTCCAATGCTTAACCACGATCGGT
TCCACGCTGTTTTCCGGCTCTAGAGACATGTGCATTAAACGATGGGATCTAAGCAAGATGGAGCTGGTTCAGTCGCAGAA
CAACGCTCACAAAGATTGGATTTTGGGCTTGTGCACGATCAATAATGGTTCCATAATGATTTCGGGATGCCGCGGCGGTG
TGCTGAAGGCATGGTCCGTCCCCAAGGATCCGTTGGATCCCCAGGATCAGAGGGAATGCACGCCCATCGGGGAGGTTCGG
GCGCACGCGTCCGCTATCAATGCGATCGCGACGAATCAGCAGCATATATTCACGGCGAGCAACTCCGGAGAGGTGAAGCT
GTGGCGTATACCCGATTCTTCATTATCTATGTCTATCTCCACAGTTTCCCTTTAACTTTATTTGCTTTTTGCCTGTGCGT
CACTGTGTTATGCGTTCATCTTGT
PEP:
>LH12574-PA
MADDSSVRVAVRIRPQVAREVIDMCRICTQVPQGEPQVFLGPDKAFTYDYVFDTQSDQSTIYETCVNRLVEGALDGYNAT
VFAYGQTGSGKTYTMGTGFDVEVDEFIVGIIPRAIQHLFNGITDKQERARERAQMPPEFKVTAQFLELYNEDLKDLLEPG
GPRGGARIHEDTAGNIHLAGVEPRVVTSPEQALEYLRLGALSRTTGSTQMNTQSSRSHAIFTLYIKQQRCIKVEDPDADV
DTSGVELANEFETLTAKFHFVDLAGSERLKRTGATGDRAKEGISINCGLLALGNVISALGDKTKKASHIPYRDSKLTRLL
QDSLGGNSQTVMIACVSPSDRDFMETLSTLKYANRARNIKNKVTINQDKSSRTIASLRREIQQLQLELMEYRQGKRVVGE
DGVNDAWHENQMLSSELQSLRTRVKALSETVEALTAKNALLLAEKATGQWMAASGGGDDQVTSLVQGYVQEIEELRARLL
EAEAMYQQLKKRQMQVNAANPYGDSSFHSDSASVLFDAKKDVEKEIEALKVLKGQYSGSTIAKPDEGEMDDTENGQDSVS
EDDSDDDSDQEDEEEAAMGRELEALTSDIDVKQRLIQELELSQRRLQTMKQHYEDKLAQLQARIRDTQEERDKVLLSLQQ
QPAPPTEKVKKLRDEYEKKLSNMQKEMRLLQSAKKEHARLLKNQSQNENRLRGLRNELSEMKRAKVKLLNKMREEAQRHK
ENELRRNREIAQLRKESRRHANVIRTLEADKRMKEVVLRRKQEEVTALRKRDRGLSQKAAGRTPVKPLNPKAMKQRWQTF
ERTITKQAIAKQAAAETEREMERLLQERQELGRDLEKLQKHRSQITSTRGDTVDIDEEIDNVKSKISYLQDSIAECQRDM
VEMGDGEAEGEPGVEALISTIRTVDEAQYLLQRMLAFTVEQSCIAAQKQLEVRDMESRLNQVAQESDVQHQLLEHVLRDR
DLLTLTNNQNNALAYSPASSRSSSPDTESYSQIILGEEKPRNSKVRRRTTQPQELLYGIHTPENMKADDQNQNHNHPLTR
VPSAPGSLKGLVLTRNQHGNTGGSPTLSRRDSTSPRALRRPIHPGGGSMEQVAHTDISSPPGSPTTYRRFNSREENVFSR
LTASRQPIASEPQPMKGIISQYQGKVQPRAILQCSHVAEGHSKAVLTICVTPDLLFSGSKDRTVKVWDLRTGIESFTLSG
HPNNVVAVKYSAVHRLLFSVSSAYVKVWDLRASNGCIKTLFSSGQTQSGPIALSTPSRILQVPVGETTINDLALSLDEQE
LYTASSDKVRIWDLRKLAYTARLSTPHTAAVMCLAVAEDGRVIAGSKDHLISLAEPNVSGPSISLAPPHYDGVQCLTTIG
STLFSGSRDMCIKRWDLSKMELVQSQNNAHKDWILGLCTINNGSIMISGCRGGVLKAWSVPKDPLDPQDQRECTPIGEVR
AHASAINAIATNQQHIFTASNSGEVKLWRIPDSSLSMSISTVSL
Swiss-ProtKinesin-like protein KIF21A
KEGG     K10395     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00129     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
PRINTSPR00380     
CoilsCoil
ProSitePatternsPS00411  KINESIN_MOTOR_1; Kinesin motor domain signature.     
OrthologiGroup-00117    Kinesin-like protein KIF21B      

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