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Gene detail [Fasta]

Species Linepithema humile
GeneLH12239
Positionscf7180001004574:2986083..3007613[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12239
sequence mRNA:
>LH12239-RA
ATGGTTTCGAGATACAGCGTCTCGAAGGAGGGCGCAGTGAATGTCGTCGGTGCCTTAGGACCTATGCATTGTCTGCTGCC
GCACTGTGGCGGTACCCATCATCACCACCATCTCACGGCGTCGCATCCTCAAAATCCGCAGCCAGGGTCGGAGTTTCATG
GAACCTACAGCGCCCAAGGGGGTCAGGTGGGCGGGGGTGCAGCTGGTAATGTAGGAGTGCCTACAGGCAGAGGGCCGCCG
CCGCTCGGCGGTATACAGACGATAGGACAATCCGCAGCGGGTATACCACCAGGAGGTCCTGCCGGAGGGCAAGCACCTTC
TCAAGCACCAGCGCCAGGGGTGCAGTCGCAACCACCGCAAGGTCCAGCGCCTACCACGACACCACCTGTACACACGCCAT
CGCCGCAGGAAATGGGAAAGCAGGGTCATTTGCCGACGCAACCGCCGTCTTTGCAGCCGGTTTACGTGCCGTCGCAAAGC
CGACCGGGGTCACAGAGTTATTATCCAACGGCTCAAAGGCCACAGCAGCCACGAGGTATTAATCATAGAGGCGGTGGTCA
GGGCGGTAGTGGAACACCGGTTGTCGGTATGGCCGGAGTTGGTGGAGGTGGAGGGCAACCACCTGCGATATACTCGCACC
CTGCTAGTTTACCAGTGCAAGCGAGTGCAATGTATATAAGTCAAAGTCAAGTTCATGGTCTTCACACAGGACCTCATCAA
CCTCAGTCCGTCTATCAAATGAACAATCAAATACCGATTCAGTTTTCTGGTCCGCCTCAACGACACCAACCGCATCAAAA
TCAGCCGTATTATCAAACCTTTCAACCACCTCCAACCATCATAACACCGCCAGGTGTGGCCTTCGGATATCACACAACCG
CCACTCAAGCGCATCATAACTGTGAGTTATATTATGCGAAGCCGAAGAACTTCAACAATGCAGGGGACTTCAACAAGGCT
GACATGTCGTATTTTTCTCTGGCAGATTATACATACATGAATTCGTCAAACATGAATTTGACTAGGACGAGTACGAGTGC
TGTTAGCGGTGGAGCGCAACATGTTGCAGGCCCGCTGACGGGTGCTCAAGGTGCTCCAGTCGTACCGCAGGGTACACTTC
AGCAACCCACTCAACAAGCCCAACCTCTGCCTCCAATGGGTATACCTCTATCGCAAACTGACGTGTACTCGGGACACAAC
GGTGCTGCGACGAACGCTAATAGCACCACTAGATCGCGAAAACCTAGAGGACAGAACGCCATTTTGGACATAGTCAATCC
CGTCACTGGTAAGAATATCAGTGACGAAATTTATTGCAGTAACGAAACTACGCAGAGTGGTGAATCCAGTAATCGCGAGA
CGCCACAACCACAGAACAATGGTGCGGAGGTGATAGCCGATTTCGCTGCTCGTGTCGCGAAAGCCGCGACCGAGGAGTCT
GACTCGGTATCGACGAGCGCGTCCGAAACAGCGCCTAACACAACCCAAACAACGGCGCAAACGTCGTTATCGAACGTTCA
AACAAATTCCTCTAATGATACAAATAGTCAATGTAATACTGGTCCGCCTACGCCCACGCAAAAAACTATAGCTGGCGCTG
GCGCTGGCAATATTGCATCTACAATTAATAGTCAATCATTAGGTACTTGTAGTAATAGCGCACCGCAAGTAGATGCTAAC
GCGACGAAAACCGAATCGAAAGCGTTGCAACTCCCGATTAAGGAGTTTCAGCCTAGAAGCGAAACAAAGACAGGGACGAT
CGAGGAATCGTCACCCGTTGTATCTTCTCCGATGGTCGCCGTCACGACTAAAGATACTATTTCCGTGCAGCTTACTTCCT
CGGCTGCTAACAGCGAAATAGCGTCTACGACAGCGACGGTGACGGCTGAGATCGAACCCGAGGCCGCTGGTGCCGGAGCT
ACTGTTTCCGCTACTACTGCTCCCGCTGCTGCTCCTGCTAATATTGTCGCTACTACCGCTGCCGCGGCTGCAACTACTGC
TACCGTTGTCGGACCCGTAGTCGGAACCGGATCCGTGCCCGAGGTCGCCAAGAGTGTCAACGCCGCCTCCAACGTAATAC
AGTCACCGGTCACTCCGTACTGGAGCAACATCGCCCAGGAACTCCTGAAACCGTCCGCCACTGCCTCGAACAACCCCGTT
CCTACCAGGGAGCCGTTCCCTAACTTGTCCGCCAAGACCTCGTCAAATTTACCGCCGAGGAGGAAACCTAACGCTACTAC
CGAGCCGCCTTCGAATACCAAAGAGCAGAAAGAGAGGAAAACCCGGGAGAAGAGCCTTGGCTCCAGGGGCGCCACTCCTA
CGCCCGTTCATAATCAGGCAGCAGATCATCACCATCAAAAGACGAACGGTGACGCGGCAGGCGACAAAACAGAAGCGGAA
GTGCTTCCTAGGAACGAGATCCAACAAAAACCATCAGATGGTAAAGCTATGCAAAAGCAGAAGAGTAAGAATAAATTGAA
ACCCTACGAGCTGAATCGCAAGGGCGCGGAGAAGGAAGGCACAGACATGGACGCCTTTGTAAACCCAGTATCGGCGACAA
AAGTGGCCGAGATCAAGCAGGACAACAAGGATCAGCACACACCCGCTCTGAAAGACAGTAACAAGGAGTCCGGCAGGGAG
ATTAGTAAAGACATAAAAGAGAAGGATAATTATGAATCGAAGAAAGAGAAGGAGATTTTACCCGTTCACCCGAAAGTCGA
GAAACACGTAGTTGCCGAGGTGCCCAAGGAAAGCGCTCCCGTGCAAGCCGCTCACGTTGTAGATAAACTGCCGATTAACA
AGGAAGTGCCGAAGGAGTCCTCTCCGAAGATAGAGGACAGCGCGAAGTCGAATGTATGTAACGCGCAACCGAAAGCAGCA
GTAGTTCCTAACGACGTCGTCGATCACGCGTTAATCAAGGAGGAGATCAACTTGGAAGCATTGGTCGCGCAAAAGAACGA
GGAGAACTTCAAGGTTTCAGCGTTGCTCGCGTCCAACGACGAAAAGGTAACGCCGACAGTGATGCCGGCAGCGGTTATCG
AGAAGAAGCAGCAGCTGCAGGAAGTGGAAGCTCCGAGCGGCGGTAGTAACGCGTCGACTGAAATCACCACGCCTAGACAG
CCACAACTCAAGTACACATACAAAGAGGATCAGTGGAGTCCGATAAACACCACTGGTAAGAAGATCTACGATAGAGATTT
CTTGATGAAGCTGCAACATGAACCCAATAGCAAGATTAAGCCACCGAATTTGCCAAATCTGCAAGCTGTTTTGAAAGACA
CTATACAGAATATTAACTCCACTCTGGATTTGAGGACATTCAAGGATGCAAATCTTACCAGACACGACTCACTGATGCCT
GGATTTGCTAAATCAAACTTGAACGCACGCCCGCCGGCAACAAGTAGTCGTAAGAGCGACAGAGGCAAACCTAAGCCCAG
TAAGCCCAATGTCATACACGTCTCTTTGTCACTCCGAGAAGATGTGAAACTGAGAGAGACGGAGAACGCTTGGAAACCCA
CAAGGCTGAAGCAGTTGTTTATAACCGAGGAAGACGCGAAGACCGAGGCTCTCTACAAGCGAGTGCGCAGTGTGTTGAAC
AAGCTCACTCCGCAAAAATTCGCCACCTTGGTGGAGCAAATTAAGCATTTACCCATTGATACACAAGAACGTCTACAGGG
AGTAATCAATCTGGTCTTCGAAAAAGCCGTCGACGAGCCCAGCTTCTCCGTAGAATACGCATTGTTGTGCAAAGAACTGG
CCTTGATGGAGGTTGCAGGCGGCGATCAAGATTGTTCTATCAGCTTTAAGAAACTCATTATCACTCGTTGCCAAAAAGAA
TTTGAAAAGAATCCGATTGACGATGTTGCTAGGAATAGAAGAATTAAGGAAATTGATGAATGCACAGATCCTGAAAAGAA
AAAGGAATTACAGTTGGCTCTCGAGGACGAGGAACGTCGGATACGTGTGAAATCTGTAGGAAATATTCGGTTTATTGGTG
AATTATACAAACAACAAATATTGACTACGAAAATCATGCACCGCTGCGTCCGACATTTATTGGAGCAAAATGATGAAGAC
AACTTGGAGTGCCTGTGCAAGCTGTTAACGACAATTGGCAAGGATTTAGAATTGAAAGGATCTCCCGAGGAAATGCAAGA
ATATTTCGGCAAAATGCAAGAAATGGTCATTCGAAAAGGTCATAGCAAGATCAGTTCTAGGATCCGTTTCATGCTGCAAG
ATGTTATAGATTTAAGAGCGAATAAATGGATCCCAAGAAGAAACGAGAATAATCCCAAGACGATAGACCAGATCCAAAAG
GAAGCGGAATCCGAGAGGCTGGACATGCAAGTGAACAGCGCACCGTTGAACACTCCACGAAAAGATGATCGCAATAACGA
CAGGAAAAGAAATCGTGGATTAGGCGGTCCTACTGACGATGGTTGGAGTCAACCAGTAGGAAGGGTTAGACCTACCACGT
ATTCGGTGGAAACAGCGAAATTGAAGAACAAGCCGCCTCCCATGGATGATATGCAGCTTGGTAATAGGGCTTCTTATTTG
TGGCGAGCTACCACCCCGTCCAATAACTCCAAGACAATAAGTGCGAATAAATTTGCATGTTTAGAGAACATGTCTAATCT
AGATCAGGACAAACGGATGCCGCCGCTACCACTCTCTGGATCGAGATCAACGGGTCCCAGGGAATGTGGTCGCGATTACA
AATCTTATGACGGAAGGAGTTCTCGTAACGGTACTCACCAATTGGGCGCAGCGTCGAGCAGAGACAGTCATCCGTTATTA
GATAGTGCGCAGGGTAGAAATGTGTCGATGCCTCTGCCTGTAATGAAATCTGTTTCGCAATCTGGCGCAATCAGCCACAA
ACCCGCAATGTCGGAACAAGAATTCATCAAGGCTCATAATTCCATATTAAAACACTACCTTGAGGAACCAATTGTCGAAA
ATACGGGATTAGAAGTTCAGCAACAAAAGTTCGATATTGATACCTTGAACAAGTTCACGCGCGAATGCATCAACTATGTT
CTGGAAAAATCGCCGACCGAGCGAGAACTGGTTTCCAAACTTCTGTCCCATCTGCTTAGGAGAAATATTCTACCTATGAA
GTGTTTCAAAGAAGGGTTAGGAGAAGTGTTGGAAATTGTGGACGATTTGGTTATAGATATACCAAAAATTTGGACGTATT
TAGCGGAAATATTGTATTTTTACATGCATGCTGATATTCGTGTTGTAGCACATTCGATAGAGGACGGCGCTATCCCGTTA
TCCGAAATGAAGAGCGTATTTCTAAGTTTGAGGCGTCAAGGCTACGTAGGCAAGTTCATCGGTGAACTTCTGACGAAAGT
ATCTCTTAGCAAAGGACCTAAATGGGTTGCCGATAAATGGGACCAAAGCGGACTGCAATGGAGCAACTTAATTGACACAG
ATCTGGAAAATATGGAAAAGATCATCACGGAATACAATTTAGAGTTCCTAACTGGTGATTATAATAGTGCCAAAGGCTTT
CCTACTACCGATCAACTCTCGTTAGAAAAAATTCAGGATTATCTCACGAGGCTCATGAAGGATAATACTTCCTTTGACGA
AATTTGCAGTTGGATAACTGCAAATGTTGGTAGTAGAGATAAAGACCCCAGGTTTATAAGACATTTAATGACTGCCATTT
TAGATACTACGTTAGGTACTCTCGTTCCCATTATGAACCAATTGTGGATGGATAATGTGATATCGAGCGACGCATTTCTG
ACATGGCAAAAGAAGACTCCAGAATCAACGGAGGATCTTGTAGGACATAGCGTCTCAATTGTCGCCCTTACGTCGTTCTT
CACCGATTTGCAAGAACCGGACGATAATTCCAGTGTCGAAGAGTTGTCAACTAGTGCGAAGCAGGACTGTTGACGATACT
GTGATCGATTACACTATCGTCTATTAAAAAGACTTAAA
PEP:
>LH12239-PA
MVSRYSVSKEGAVNVVGALGPMHCLLPHCGGTHHHHHLTASHPQNPQPGSEFHGTYSAQGGQVGGGAAGNVGVPTGRGPP
PLGGIQTIGQSAAGIPPGGPAGGQAPSQAPAPGVQSQPPQGPAPTTTPPVHTPSPQEMGKQGHLPTQPPSLQPVYVPSQS
RPGSQSYYPTAQRPQQPRGINHRGGGQGGSGTPVVGMAGVGGGGGQPPAIYSHPASLPVQASAMYISQSQVHGLHTGPHQ
PQSVYQMNNQIPIQFSGPPQRHQPHQNQPYYQTFQPPPTIITPPGVAFGYHTTATQAHHNCELYYAKPKNFNNAGDFNKA
DMSYFSLADYTYMNSSNMNLTRTSTSAVSGGAQHVAGPLTGAQGAPVVPQGTLQQPTQQAQPLPPMGIPLSQTDVYSGHN
GAATNANSTTRSRKPRGQNAILDIVNPVTGKNISDEIYCSNETTQSGESSNRETPQPQNNGAEVIADFAARVAKAATEES
DSVSTSASETAPNTTQTTAQTSLSNVQTNSSNDTNSQCNTGPPTPTQKTIAGAGAGNIASTINSQSLGTCSNSAPQVDAN
ATKTESKALQLPIKEFQPRSETKTGTIEESSPVVSSPMVAVTTKDTISVQLTSSAANSEIASTTATVTAEIEPEAAGAGA
TVSATTAPAAAPANIVATTAAAAATTATVVGPVVGTGSVPEVAKSVNAASNVIQSPVTPYWSNIAQELLKPSATASNNPV
PTREPFPNLSAKTSSNLPPRRKPNATTEPPSNTKEQKERKTREKSLGSRGATPTPVHNQAADHHHQKTNGDAAGDKTEAE
VLPRNEIQQKPSDGKAMQKQKSKNKLKPYELNRKGAEKEGTDMDAFVNPVSATKVAEIKQDNKDQHTPALKDSNKESGRE
ISKDIKEKDNYESKKEKEILPVHPKVEKHVVAEVPKESAPVQAAHVVDKLPINKEVPKESSPKIEDSAKSNVCNAQPKAA
VVPNDVVDHALIKEEINLEALVAQKNEENFKVSALLASNDEKVTPTVMPAAVIEKKQQLQEVEAPSGGSNASTEITTPRQ
PQLKYTYKEDQWSPINTTGKKIYDRDFLMKLQHEPNSKIKPPNLPNLQAVLKDTIQNINSTLDLRTFKDANLTRHDSLMP
GFAKSNLNARPPATSSRKSDRGKPKPSKPNVIHVSLSLREDVKLRETENAWKPTRLKQLFITEEDAKTEALYKRVRSVLN
KLTPQKFATLVEQIKHLPIDTQERLQGVINLVFEKAVDEPSFSVEYALLCKELALMEVAGGDQDCSISFKKLIITRCQKE
FEKNPIDDVARNRRIKEIDECTDPEKKKELQLALEDEERRIRVKSVGNIRFIGELYKQQILTTKIMHRCVRHLLEQNDED
NLECLCKLLTTIGKDLELKGSPEEMQEYFGKMQEMVIRKGHSKISSRIRFMLQDVIDLRANKWIPRRNENNPKTIDQIQK
EAESERLDMQVNSAPLNTPRKDDRNNDRKRNRGLGGPTDDGWSQPVGRVRPTTYSVETAKLKNKPPPMDDMQLGNRASYL
WRATTPSNNSKTISANKFACLENMSNLDQDKRMPPLPLSGSRSTGPRECGRDYKSYDGRSSRNGTHQLGAASSRDSHPLL
DSAQGRNVSMPLPVMKSVSQSGAISHKPAMSEQEFIKAHNSILKHYLEEPIVENTGLEVQQQKFDIDTLNKFTRECINYV
LEKSPTERELVSKLLSHLLRRNILPMKCFKEGLGEVLEIVDDLVIDIPKIWTYLAEILYFYMHADIRVVAHSIEDGAIPL
SEMKSVFLSLRRQGYVGKFIGELLTKVSLSKGPKWVADKWDQSGLQWSNLIDTDLENMEKIITEYNLEFLTGDYNSAKGF
PTTDQLSLEKIQDYLTRLMKDNTSFDEICSWITANVGSRDKDPRFIRHLMTAILDTTLGTLVPIMNQLWMDNVISSDAFL
TWQKKTPESTEDLVGHSVSIVALTSFFTDLQEPDDNSSVEELSTSAKQDC
Swiss-ProtEukaryotic translation initiation factor 4 gamma 3
KEGG     K03260  EIF4G; translation initiation factor 4G     
SUPERFAMILYSSF48371  ARM repeat superfamily     
Gene3DG3DSA:1.25.40.180     
PfamPF02854  MIF4G; MIF4G domain     
SMARTSM00543     
ProSiteProfilesPS51366  MI; MI domain profile.     
OrthologiGroup-00853    Eukaryotic translation initiation factor 4 gamma     

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