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Gene detail [Fasta]

Species Linepithema humile
GeneLH12243
Positionscf7180001004574:3056764..3063395[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12243
sequence mRNA: 
>LH12243-RA
ATGCCACAGCAATTGCGTTATGACGGCCGAGTAGTTGCGGTAACGGGAGCAGGCGCAGGATTAGGACGAGTTTATGCATT
GTTGTTTGCATCTAGAGGGGCTAATGTGGTCGTAAATGATTTAGGAGGCAGTAGACATGGAGATGGAAGCAGCACCAAGA
GTGCTGACACCGTGGTCCAAGAAATTCGGCGAAATGGAGGAAAAGCTGTTGCGAATTATGATTCAGTGTTGGACGGGGAG
AAAATTATTAAAACGGCAATTGATGCATTCGGTCGTATTGACGTTATTGTTAATAATGCCGGTATTCTAAGAGATGTATC
ATTCATGAAAATGTCTGATGCGCAATGGGACACGATACACGACGTTCATCTTAAAGGTTCTATGAAAACAACTCGAGCAG
CTTGGCCGCATTTTATTAAGCAAAAGTACGGCCGTGTAATTTTTACTTCTAGTAACAGCGGTCTGTATGGAAATTTCGGA
CAATCCAATTACAGCTCGGCAAAACTAGGTCTTGTGGGATTAGCGAATACATTGGCCATTGAAGGTGCAACAAAAAATAT
TTACACCAATGTGATAGTGCCCACAGCTGGCTCGCGTTTAACGGAAGATATTCTTCCACCAGATTTCTTCGATCAATTAA
AGCCTGAATTAATAGCACCCGTTGTTTTTTGGTTGTGTCACGAAAAGTGTAATGAAAACGGTTCAATAATCGAAGCGGCA
TTAGGCTGGGCTGGCAAGTGTCACTTGGTTCGCTCTTCGGGTTCTGTTCTGCGGCAAAGCTTATCAGACGATGTTACGCC
AGAAAACGTACAACAAAATTGGTCAAAAGTAACCGACATGACTTCGACAAAGCGACTCAATAATATTCAGGAAGCAACAG
GAGAACTGTTAAGTGTTATTGAAACCTTAAAAGATGATGTTTCTTCAGAAAAAGGAATCTATGTTATCGGTAATAATTAT
GGTAATCGTGACATTATATTGTACGCGCTTGGAGTCGGAGCCACAGTTCAAGAACCAAGCGATATCCGTTACTTGTATGA
AAATGCTGACGAATTCGCTGTTGTACCTACTTTCTATGCTTTGTATGGACCTGAAGGATGCATGAATACTTCCATAGTGC
AGGATGCTCTGCCAAATGCACAATTCGATCCAACAAGGTCACTCCATGGTGAGCAATATCTAGAAGTTTTTAAAAAACTT
CCTACAGAAGCAACAGTAGAGACTCGCTTCGAAGTTCAAGATGTTTTGGATAAGGGATCAGGCGCTGTTGTCTTAGTTAA
ACATGAGACTTATGATGTAACAAATGAAGAGAAGCTGTCGACTGGACAATTATCTGTATTCGTTGTTGGCGCAGGTGGTT
TTCAAGGAAAACGAACATCGCAACATGTCATTCCAACTATTGATCCTCCCTCTCGCAATCCAGATGCAACAATTACACAA
CAGACTAGCTTTGATCAAGCTGCTTTATATAGATTGAACGGAGATTTCAATCCTTTGCATATTGATTCGAATATTGCTGC
CATGGCAGGATATGAAAGACCAATATTGCATGGGTTATGTTCTTTGGGATTTTCTACCCGCCACGTTCTTCAGACTTACG
CTGCTGGAGATCCATATTTATTCAAATCCATTAAGGCGAGATTTGCAAAGCCAGTCTTGCCGGGACAAACGTTGCGTACT
GATATGTGGCGTGACGGTAACAGGATACATTTCCAGACGTCTCTCGTCGAGTCCGGCGTACCAGTTGTAACAGGCGCTTA
CATTGACCTGTTGGACGTTAAAATGGAAATACCACGCGCGAATCCGTGTTCCGGAACGGAAGACGTACAGAGTGACGCTA
TATTTACAGCCATTGCCGAACAAGTGAAATTAAATCCGGATCAAGCTAAGAAAGTTAACGCAGTCTTCCTTTACAACATT
ACCGTGAATGGAAAGCCGACGTCTGAATGGACTCTCGACTTGAAGAACGCTGAAGTGCACAAAGGAAAACCTAAATCTGG
AAAAGCAGACGCGACGCTCACTTTGGATGATAATGATATGGTTGAAATTGCACTGGGGAAATTAAATCCACAAGTGGCAT
TTATGCGTGGAAAATTGAAAATAAGCGGAAATATCCTGCTGACACAAAAATTAAAAACTCTTATGGAAACTAACAAAGCG
AAGCTATGATTCTTTTACATTCTTATCATAACTTGAAACGCTTAACCTAGCTGAAGGTATTCGTTATGGGCTGGGAACAT
GTATACAAATAGATGTGTGTGTGCGCGCGCGTGTGTATATATATATGTATATATATATACACATAC
PEP: 
>LH12243-PA
MPQQLRYDGRVVAVTGAGAGLGRVYALLFASRGANVVVNDLGGSRHGDGSSTKSADTVVQEIRRNGGKAVANYDSVLDGE
KIIKTAIDAFGRIDVIVNNAGILRDVSFMKMSDAQWDTIHDVHLKGSMKTTRAAWPHFIKQKYGRVIFTSSNSGLYGNFG
QSNYSSAKLGLVGLANTLAIEGATKNIYTNVIVPTAGSRLTEDILPPDFFDQLKPELIAPVVFWLCHEKCNENGSIIEAA
LGWAGKCHLVRSSGSVLRQSLSDDVTPENVQQNWSKVTDMTSTKRLNNIQEATGELLSVIETLKDDVSSEKGIYVIGNNY
GNRDIILYALGVGATVQEPSDIRYLYENADEFAVVPTFYALYGPEGCMNTSIVQDALPNAQFDPTRSLHGEQYLEVFKKL
PTEATVETRFEVQDVLDKGSGAVVLVKHETYDVTNEEKLSTGQLSVFVVGAGGFQGKRTSQHVIPTIDPPSRNPDATITQ
QTSFDQAALYRLNGDFNPLHIDSNIAAMAGYERPILHGLCSLGFSTRHVLQTYAAGDPYLFKSIKARFAKPVLPGQTLRT
DMWRDGNRIHFQTSLVESGVPVVTGAYIDLLDVKMEIPRANPCSGTEDVQSDAIFTAIAEQVKLNPDQAKKVNAVFLYNI
TVNGKPTSEWTLDLKNAEVHKGKPKSGKADATLTLDDNDMVEIALGKLNPQVAFMRGKLKISGNILLTQKLKTLMETNKA
KL
Swiss-ProtPeroxisomal multifunctional enzyme type 2
KEGG     K12405  HSD17B4; 3-hydroxyacyl-CoA dehydrogenase / 3a,7a,12a-trihydroxy-5b-cholest-24-enoyl-CoA hydratase [EC:1.1.1.35 4.2.1.107]     
SUPERFAMILYSSF55718  SCP-like superfamily     
Gene3DG3DSA:3.10.129.10     
PfamPF02036  SCP2; SCP-2 sterol transfer family     
SMARTSM00822     
PRINTSPR00081     
ProSitePatternsPS00061  ADH_SHORT; Short-chain dehydrogenases/reductases family signature.     
OrthologiGroup-00487    Peroxisomal multifunctional enzyme type     

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