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Gene detail [Fasta]

Species Linepithema humile
GeneLH12153
Positionscf7180001004574:2254419..2262083[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12153
sequence mRNA:
>LH12153-RA
ATGGACCGTGGCAAGACTGGGCTTGGTAGAGCAGTTAAAAGTAAAATTGCTCAACATCCTTCTGACTTATTTGCATTAGG
ATCTAAGAGCTCACGGAATGAAAGTTCTGATTCCAAAAACAGGCCAGGTGTTATTCATCCAAAACCAGGTGGTAGTTCTG
CAACTTCTGGTAATGATCGGAAAAAGGAAGCACCTTCTGGATCTCTTCAATCATTTTCATATGTTCCACAGAAGAAGCCT
AAGTTAAGTCATATCGGTTCTTATCAAAGACAACCTTCTTCGAGCGCAGAAGCATGGGAAGTTTTAGCTACAGACACTGA
TCCTGCAGACTTTGTACCTATGGTACTTGAAGCTAACGACAATGATGAAGCTGACAAAGTTATTGGGATAATATGCGGTG
CAATCAAGACATTAAAGAATCAGAAATGGAAACCTGATACATTAGTTTACATGGGCTTATTGTATCTGGCAAAGATTCGC
CCATCTATTTTTTCACATGATTGTATATTACATGCACTGTCCTCCCTTTTAAAAAGAGATCAAACTTATAATTTCAAGAG
TAAAGGGAATCCATTGGTTCCTGTACTCGCTGCAAATCTTTTAATGAAAGGATTCCATGAGAAAAAGAATTGGCCGGAAA
TATTTGTGAAGTTGTATATCGAAGATGCTCTTGGTGAACGTGTATGGGTTGATCATGAAGAATGCAAGGGCTTTGTTGAC
AACATTTTAACTGGTTTTAATACAAGACATCCCCCTAAGTCTGTATTACAGCCGGAATTTCCTGTGTTAATGCAGCGGGA
TTGTCATAGCCCATCTACAGTGGATGATGAAGATCCGACAGCATCAACGACATTGTTATCTGGAGATAAGGAAAAAATAG
AGTTTCCAGTAGGTCCGAGATACGCACATTGCATGGAGAATATTGAATCAATAGTGTTGGAAGCTGTGAAGGAGCAATTG
AACAGACGTCAAGCTGAGACCATAACGAGAAATTTCTTAAAGCTGCTCTCCTCGGCATGCGGATTTGTGGAAATTAGAAA
CATCGCTGTCCCCAGGCTAGAAGTATGGTTGCACAATCCTAAACTGATGAGACCCGCGCAGGAACTGCTCATGTACATTT
GTTACAATTGCACGTCTCACACTCAAAGAGACGTCGAGGTCATAAGCCAACTGGTGAAAATGAGATTGAAACCGAAAGCT
GTAATTAATATGTACCTGAACGGCGTTAAGGAACTTATTGGATTACATCCGGAGAATTTAGCGACCATATTAAAGCACAC
GATTTACAACGAATTGTCGAACGCGCGCAATCCAAATAACATGCCCATGCTGGCTATAATGTTCCAGACGTTACCCGAGC
AAGCGGCCAAGTTGCTCGCGGAGATCTTTCAGGATTTACTGATGAATCGCGAGGATTACTTGAGGCCATTGCGCGCATTG
CTCAGAGAAATCGTGCGCGTATGTCGGCATGATATCAACCTCCTAGCTTTCGCTCGCATGCTTATGTCCGAGAGGCCAGA
CATAGCTCAACAATTGTTGACTTTTGAATTCAAAGATCGCATGTTTATGTCAATAGCGGACCTCTTGTGTCTGTGTATGC
TTCTCGGAATAAGTCCGCAGGTGAAAGAGGCGGCGACATTGTCACAACGTGCAGACAAGAAGGACGTAGCTTTGCTACAT
CAGTTCCAAAATCTTGTGGCCATGATACAGTACGAAGCGATACTCTGGTTGCAGAATGTAGCGCCACAGATGTACGCCAT
CGGACGAAATGAGCTGCTGCACGCAATGCACAAGATCTTGCTGTTAGAATCTCCTGAAAATTATTACAAACTGGATAATT
GGCCACCGGAATCAGACAGAGGATTTTACATACGATTGGTATCCGACGTTCCTCTGCTGCAAAGTTCGTTGTTGAGACTA
TTACTGATTGGTTTTGCAAAAGATAACAGCATTACTCACTCGGAGACGTTGGATTTAGCCGATCAACTGATACGGCGCGC
CGCTGCTAATTCGACGGAAAATTTTCCTATGTTGCAAGCAGACAAAACGGACATAGTTGAACTTATTTTCAATCTTTGCA
TTTATCAGCCACCGGGAACAATAAACATACCCGCTGGATATGTGCCGCCAACATTGGCGATAGCTAATCTCTACTGGAAG
GGATGGATAATGTTATTAATGATGGCTGCTCATAATCCAACTACAATCGGCGCATTAGCGTGGAAACGATATCCTATACT
GAGAACATTGATGGAAATGTGTATAACAAACCATTTCTCGTATCCACCACCGACTATGGCCTTGCCGGAGATAATGGAGC
AAGAACGCACGAAGGAACTGCAGGTTGAAGCCATGGAGAAGCAAGAGATATTGGAATACGAATCACATTTAGCCGCTGCA
TCGACTAGAATGCAGTTATCTGAGCAAAATAGCTTTCTACTGTCACAGTTAATCACTATGGATCCAACGGGTATCGCTAG
AAGACCACCGCCGGCTGTGCTCGAGCAACTACAGTCATTGAACACTTCTCACAGATTGGGTCATCTGCTTTGTCGGTCGC
GAAAGCCAGATTTCTTGCTAGATATCATTCAGCGACAACAACAGAGCACGTCGCAGAGTATGCCTTGGTTAGCTGATCTG
GTGCAAAATAGCGAGGGCTCTCTCAGTCAACTTCCGGTGCAATGTCTATGTGAATATCTCTTGTCGACTAGCCCGCAGAC
GGTCGAGAAGCAGCCCAGGCAACAGCAGTTGCTGGCTCACCTTCAGACACTGCTGACCGATCCGAATCAGGATCAGCAAC
ACGCTTACGAAGTCTTGGAATACTTTTTGAGAAGACTGAGCAGTCAGCAGAGTAGTAGTCGCATACAAGCGATCACTGGA
TTGAAGATGGTTTTGGACTCGATACCTCTCGAAGATGACACTATGGACGTGGATGGGGAGAATGAGAAGGAGACTTGGCT
GCTTCGAAAACTGCCGTCTATACCTCACTTTCTGTCTGTGCGCTCACTGGTTTCCACGGCGTTACGCGGCGCTTGTCAGG
TGGAAAACAGCCCCGAACTGGTGCACACTTACATATCGTATCTGGCCGCGCATACAATCGACGACGATTTACCCGACCTG
ACCGACTTGGCCAACGAGATCTCTCAATTGGTCGTTGAACGTAGCACGATCATCGCGGCCATTCTGCCGCAACCGGAGAG
CGATAATCAGCAGGCTAAGCAAACATTGCATGCTTTTATGGCAATCTTCTGCAATTATCTCGAGAAGGCACGATCGCCCA
GAGGTGAGGGTTACCAGTGGTCCGAGAGTCAAGATCAGATTTTGGTGCAGTGGAGCAACGGCGAAGAGTGCACGATGCAT
ATATTAGTGGTGCACGCTATGATTATATTATTAACGTACGATTCATCCGAGGATGATCAGCTGTTCACCACTTTATTAGA
GACGTGGTTTCCACTGACCGAACAGCCGAAGGCTTTTCTCGTGGACACCAGCGAGGAAGCGCTACTCATACCTGATTGGT
TGAAATTACGAATGATTAGAAGCAACGTGCCGCGTCTAGTCGACGCAGCTCTGAAGGATCTCGAGCCACAACAGCTTGTA
CTCTTCATACAGAGCTTCGGAATACCCGTGTCGTCGATGAGTAAACTGCTGCACACCCTTGACGCGGGTGTCCAGATCGA
TCCGGGGTCAGTCGGCGAAGCGGTATTAGATAAGACATACATGGCGCAGTTGGTTGAGGTACAGCATAGAAGAGGCGCTA
CTGGTGGATTGGTATTTGTGCAAGTGTTGCAGCTGATGGAACCGCAATTACCAGATGAGAATATGATGCCGATCAGTAGG
TTGCAGCAACCGTTGCCGCCAAGCGCCACAGTGCAGAAGCAGTCCGTCATACAGTGCTCGATCAAGACCGATGTGCCTCA
TTTGATAAATCGACTTTTTATCGAGAACATCCATGTTAATCAAAAGATAGACGCTTATCGACGCTTGCATAAAACTCTAG
CGAAGGATCTGCAGAGATCGAGCGTTAAAGAGAGCAGCGCCGTGGTGCTGGCGATACAGCATATATGCAGCGTTCTGAGT
TCTATGCAGGTGAAGCAGTTTTTGGCCTCCCTCGTACACATGCCACAGTACTCTTGCACGCTGATGCGAGTGATACTGCT
GCCACTGAAGAAACCGTCGACATCGAAACACGTAGTCGAGCTGGCACGCAATATGTGCCTGAATCTAATATCGCTGATAG
GCGACGTGAAGGCGCCGGTCCTATCAATTCTGCGGGATTTCGCTAACGTGCAATTGACGAAGACGCCGCAACGTACGGAG
CTGTCGATGCTGATGCAGAGCCGCGGCGAAGGTCCCGGTCCGATACTGGAGGGCACAGATCCCGTGAATCTGGAAGGCGT
AGGTCGGAGACTGCTCGATCTTTGCCTGAAACAACAGAAGAACGATGTTTTAGTTGAAGCTATGGCGAAATTATTGGTCA
GCGACAGTAATGAAGACGCGTTGAAACCTCGCACGGGCCTGTTGATCGATTGGTTGGCATCTGTGGAGCCTGAATTGATC
GGTATTTGTCCCAATCTGCAGATGAAGTTATTATTCGGTAAAGCAAAGGTGCACATTAACATCGATAAGAATGTTGTCAG
CTCGCATTCTTGCAGACCTTACTTGCTAACATTGTTGACGCACAGAGCAAGCTGGGCCACTTTGTATAAATGTGTTGGGC
ACTTGTTGGACAAATATGACGAAGGATACGATCCAACTGCGGTTCTGGACTTTTTATGGGCTCTGACATGCAATCCTAAG
CTGTGGCAAGGTCGGGACAAATTCACGCCGAAGCATTATGTTCCTGAGAATATCTTGCTGCTAGAAGAACGGCAGCTGCT
TAATCTAGTGACGTATTTAGTGTCCGAAGCCGTTATTATATGTAATATGCAGAACAGAAACGCCGCCCTCGCAAGAATGG
ACATCAGATTGGATTTATTGTTGCATTGTATATCTACTGAAGATGAACTGATTTCCAGTGTAGTAAACTATTTAGCGGAA
CGTATGATGGATAATATTGAGTACGAATTTTACAGTCGTATACATCTTATAACATATCTTATAATTCACCGTTCGTTCAA
AGACTCGGCGGATATGGCACATCAGTTTCTACTTCACATGTACATGAAAATTCCGAAGGTTATCTGTTTTCTTAACACTT
TCCAAGCGAACAAGTTCGTCAATGGAGCGAAAATAACCGATTGGACGGGCTCGGTGCTCGATTGTATGAGCCATTCTTTA
TTGACGGCGTTGGCGGCGACCCCGAGGCAAAAGTCCTGGAATTCGAAGTCTCAGGAATTCGAACTTTGCGCAAGAAAAAT
GGCCGCGGTGCATCCTATATTAGTATTACGGCAATTACCGATGTTGGCGTCTTCTTTAATGGGAAGATGTTATCTCGACT
TCAGTCAATTTCGATCCGGTCATCATTTAAATCTCTTCACGCAAGTTATGGGATTGTTGGAGCTGTTGCAGCCGCATCTA
TTTGACAAGCAACATGAAACTCCATTGGAGAACACTTTGGAAAATTATTTTCAATGTTTCCAGAATTACGGACATGTAAA
AGATATTACCTCCTTGGTGATCAGATTCGTGTCGCTATTACAATCTTACATCTCACGTGAGCCACAACGAGCAATGAAAT
ATCTACAAAAACACGCACAAGCTCTGCATGAGTTACAGATAAATTATCCTAGTATAATACCTTTGAGGACACTCGTATCG
GGAATACCAATGCCTAGAGAAGGAGAAGATATAGATGATATTCTAATCACTATAGCTCCCACATTGCATCCTTCGGAACC
TACCATTCCGACACACTGGCAATCACTGTTGACTACACTTTCCAAATTGCATGGTGAAGATGTGTTGAGTGCGCTTCAAG
AAATTGAACACGTGTCATTGCGAAAACCTTCGGTCTTAGAACCTATAACGGATAATATAACGGAACTGCTTGTGTCTCCG
CAGGGTAATATCAGGACGCTCGCTCATACTCTACTCGCTAGAGCGCTGAAACACCGTCCGGCATCAAACGCGAACATATT
GTCCGCGTATCAAAGATGCTTAGACAGCCATAGAGCGGACGTTCTTATGTCAGCTTTGGAAAAACTACCGGATATTGTGT
TATGCATGCAAGAACACGCTTTACCGTTGATGCAGAGAGTGTTCGAGCTAGGAGTAAATTCGAATGTCAACACGATACCT
TATATCAATAAGACTATCGCCTTGTTAAACACACAGCAAGGT
PEP:
>LH12153-PA
MDRGKTGLGRAVKSKIAQHPSDLFALGSKSSRNESSDSKNRPGVIHPKPGGSSATSGNDRKKEAPSGSLQSFSYVPQKKP
KLSHIGSYQRQPSSSAEAWEVLATDTDPADFVPMVLEANDNDEADKVIGIICGAIKTLKNQKWKPDTLVYMGLLYLAKIR
PSIFSHDCILHALSSLLKRDQTYNFKSKGNPLVPVLAANLLMKGFHEKKNWPEIFVKLYIEDALGERVWVDHEECKGFVD
NILTGFNTRHPPKSVLQPEFPVLMQRDCHSPSTVDDEDPTASTTLLSGDKEKIEFPVGPRYAHCMENIESIVLEAVKEQL
NRRQAETITRNFLKLLSSACGFVEIRNIAVPRLEVWLHNPKLMRPAQELLMYICYNCTSHTQRDVEVISQLVKMRLKPKA
VINMYLNGVKELIGLHPENLATILKHTIYNELSNARNPNNMPMLAIMFQTLPEQAAKLLAEIFQDLLMNREDYLRPLRAL
LREIVRVCRHDINLLAFARMLMSERPDIAQQLLTFEFKDRMFMSIADLLCLCMLLGISPQVKEAATLSQRADKKDVALLH
QFQNLVAMIQYEAILWLQNVAPQMYAIGRNELLHAMHKILLLESPENYYKLDNWPPESDRGFYIRLVSDVPLLQSSLLRL
LLIGFAKDNSITHSETLDLADQLIRRAAANSTENFPMLQADKTDIVELIFNLCIYQPPGTINIPAGYVPPTLAIANLYWK
GWIMLLMMAAHNPTTIGALAWKRYPILRTLMEMCITNHFSYPPPTMALPEIMEQERTKELQVEAMEKQEILEYESHLAAA
STRMQLSEQNSFLLSQLITMDPTGIARRPPPAVLEQLQSLNTSHRLGHLLCRSRKPDFLLDIIQRQQQSTSQSMPWLADL
VQNSEGSLSQLPVQCLCEYLLSTSPQTVEKQPRQQQLLAHLQTLLTDPNQDQQHAYEVLEYFLRRLSSQQSSSRIQAITG
LKMVLDSIPLEDDTMDVDGENEKETWLLRKLPSIPHFLSVRSLVSTALRGACQVENSPELVHTYISYLAAHTIDDDLPDL
TDLANEISQLVVERSTIIAAILPQPESDNQQAKQTLHAFMAIFCNYLEKARSPRGEGYQWSESQDQILVQWSNGEECTMH
ILVVHAMIILLTYDSSEDDQLFTTLLETWFPLTEQPKAFLVDTSEEALLIPDWLKLRMIRSNVPRLVDAALKDLEPQQLV
LFIQSFGIPVSSMSKLLHTLDAGVQIDPGSVGEAVLDKTYMAQLVEVQHRRGATGGLVFVQVLQLMEPQLPDENMMPISR
LQQPLPPSATVQKQSVIQCSIKTDVPHLINRLFIENIHVNQKIDAYRRLHKTLAKDLQRSSVKESSAVVLAIQHICSVLS
SMQVKQFLASLVHMPQYSCTLMRVILLPLKKPSTSKHVVELARNMCLNLISLIGDVKAPVLSILRDFANVQLTKTPQRTE
LSMLMQSRGEGPGPILEGTDPVNLEGVGRRLLDLCLKQQKNDVLVEAMAKLLVSDSNEDALKPRTGLLIDWLASVEPELI
GICPNLQMKLLFGKAKVHINIDKNVVSSHSCRPYLLTLLTHRASWATLYKCVGHLLDKYDEGYDPTAVLDFLWALTCNPK
LWQGRDKFTPKHYVPENILLLEERQLLNLVTYLVSEAVIICNMQNRNAALARMDIRLDLLLHCISTEDELISSVVNYLAE
RMMDNIEYEFYSRIHLITYLIIHRSFKDSADMAHQFLLHMYMKIPKVICFLNTFQANKFVNGAKITDWTGSVLDCMSHSL
LTALAATPRQKSWNSKSQEFELCARKMAAVHPILVLRQLPMLASSLMGRCYLDFSQFRSGHHLNLFTQVMGLLELLQPHL
FDKQHETPLENTLENYFQCFQNYGHVKDITSLVIRFVSLLQSYISREPQRAMKYLQKHAQALHELQINYPSIIPLRTLVS
GIPMPREGEDIDDILITIAPTLHPSEPTIPTHWQSLLTTLSKLHGEDVLSALQEIEHVSLRKPSVLEPITDNITELLVSP
QGNIRTLAHTLLARALKHRPASNANILSAYQRCLDSHRADVLMSALEKLPDIVLCMQEHALPLMQRVFELGVNSNVNTIP
YINKTIALLNTQQG
Swiss-ProtIntegrator complex subunit 1
KEGG     K13138     
PfamPF12432  DUF3677; Protein of unknown function (DUF3677)      
OrthologiGroup-00140    Integrator complex subunit     

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