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Gene detail [Fasta]

Species Linepithema humile
GeneLH12163
Positionscf7180001004574:2231770..2237853[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12163
sequence mRNA: 
>LH12163-RA
ATGCAGTGGCTTCTGTTACTTTGCTGTGTGACTGTTGCGAGTTCGCTTAGACTCGCCGCGTACATATCTTCTGGTGGTCT
GCACGGTGAAATTCGATTCGAGAAAATCACCGAGTCTTCCGTGCGAATACGATATTCTCTAAAACCGACTTTGCAATATC
CGGATCAGCTATGGCTCTGGTCGATCACCCAGTTTCCTGTCGATTACACGATCATCGATGGAAGATGCGACAAACGACAC
ATCGGAGAAAGTATCATCGATTTGACAGAAAAAATCGGACCTCTTGAGTTGCCAGCAAATCAAACAGGTTCGATAGAAGT
TACAGATCTGTTTTTAACTGGAGAATTAGGTTTGTGGGGAAAAGCTCTGGTATTGAAAGATAATTATTCGCCAAGAACAA
TATGCGCTTCGATCACGGTTCTTGAAAGAAATGTTGAAAAATTTGCTCAAGCGCGTTTTTACGGTCCCATAGCTGGAACA
ATTTTGTTTCGATGGTTGGGCGGCCAAACGGGCGACCCCACTGATACTATTATTCATACAAATTTGCATCACGTTCACAA
GCAAAAATTACAGTCACTAAATTATACCGAGCATCATTGGAAAATATATGTCACCGATATCTTCGAAACTGGCAAAGATA
AAGACAATTGTAATATACTCCAAAATGTCTTTGATCCTAACAATTCTGGCGTTGGAGAATCCATCGGAGATGTCGATATA
CGTTTAGGCAAGATAAAAGTCGCCGTTGACGCACAGGAAAAGTATAAAACTTTCTATAGAGATCCGGAATTATCTTTATT
GCCAGCAGATCTGCTTGGTCCACATCGTCACTTATACTTAGTCATCTTTCATCCAATGCACGAGGACTCGTTCTTAGCTT
GTGCCAAAATTAATCATCGCAAGCCAATACACACTAAGGCCGTAATCAACTCGCACGGCATCAAAGGTGAAATTACTGCG
ATCCAAGAAACGCCGTTCGATCCGACGTGGATCAATATCTCTCTGACGACTACAAATGATCTGGAAACCAGATTGCGATA
TGCTACTAAAGTAGCATCATATAAAATCCACGAGTTACCTCCGGAACCGGCAAAGAGTGTGGGATTTACTGTCGATTCGT
GTTTAACTACTAAAAAAATGTTTAACCCTTCGAATATCGACGAGAAGATCGTCCCACCTGCAGGTTTGGGAACTCAGGAT
CAATACGCTATCGGCGATCTATCGGGTAAGCTTCAAGGGCGAAAGGAAGGATCTTATCACAATGATATTTTACCCGGAAG
CGCCAAACTCAGTGGAATTTACTGGGATACATACTTACCACTTTCCGGAGTCCACAGTATCGTTCACAGATCTTTAGTTC
TTTACAAATATAACGAGACCGATAACAAAGGACTGATTCCGTGGGTGTGCGGCACGTTCGCGCTTTATACGCCGTACACT
GATTGGCAAATGCCAATGTACACGGCGAAAGCGGTATTCAGGTATCCCATTGTCGGTCGCATAGTCTTCCGACAGCCCAA
AGATGAGCCCGAAATGGACACTACTGTAATAATAGAACATCTTGTCCACGCAGACGGCAACGCAGTGAATAATACTGCGG
ATCATAGATGGATGGTGCACGAAAATCCACCGGGAAAAGACTTTTATAACTGGACAGGTCGTTGTTTGAGCGCCGGATTG
CCCTACAATCCATTTAAGGTGGAATGGAGTCTGAACAGTTCTTGTCTCGTCTCAGAAACCTCGTTGTGTCGTCTCGGTGA
TTTAACGAGGCACGGGATGCTCGATATCGCCGGTAGAAAAGTCAATGCTTCAGAAGTGACCCGAAGACTCTTTACAGACA
CGATGTTACCTTTATCAGGCTCCCACACGTTGCTCGGCAAGAGTTTGGTCATTTACGACGATCACGGACCAGTCGCGAGA
GGAGACCGATTGGCTTGTTCCATTATCGGCGGCGTCTATCGGCGTAAAGCTGTCGTTAGAGATTGGTTCGGTAACGGCGA
GCAAGTGGCTCTGGAAGGAAAATTGGAGTTCTTGCAGCAGACCGAGTACGACGTCACCAACGTGGAAGTGTCTCTCGAAG
GTCTCGGTGGTAAGATGAGCGGCTATCACATACACATGGTAATAATGACTTATCGCATCAAGGTTTCATCTCACTTATAT
GCTCAGATTAATTGTACGCCTGTAGAATACGATCTAGAATTTCCATGCGAAGGAACTTCACTCTATGGACATTGGAATCC
ATTGGGCGTCAATAACAGCGATGTACCGGCGACGGAAGAAGGTACGCTGGATCAATATGAGATGGGTGATCTGAGTGGAA
AATTCGGCACCTTGGACAACAAAAAGAGGCAAGCTTCGGCGTATAACGACACGATGCTGCCACTGTTTGGTCCGAGGAGC
GTACTGGGACGCAGCATAGTTATTCACAAGAAAGAAAAGAATTTAAGATGGGCGTGCTCCACCATAGAGAGAGGCTACTC
TCCGACCGAGGCCAGTGAGTTGCGTGCTATCGCGTCGTTCCATCATCCTCAAGGCTTCTTATATGGTTACATAAAGATGA
CCAGAAATCACAATTGGGCGATATATGTGAATCCTGTGGGTGTGGATGCCACGGTAAAAGTGAAGAACACCCGGTGCGTG
GCAGGTGGATACATATGGAATCCATATTTCACTCAATTAGCCGATCCGTTGAACACAACGTTTTCAACATATCAATTGAA
TTTGAATCGTACTGCCTGTAACAATGACTCTTTTCTCGTTGCACAGGAGGATCTCTATAGAGAGGAATGTGGTCCAGATT
TGCCGCTCAGGTGTTACGTCGGCGACATATCGTCTCGTTTAGGACCCGTTAACGTTGGGGTGAAGCGGCAGGTCTTCACA
GATCCAAATTTTCCTCTAGGTGGTCCGATATCCGCAATGGGCAAATCAATCATTATTTTCGACAAGGATTTCGGCAGCAA
CAGATTCGCCTGCGCAAACATCGAGCCCGATAACGACATCGTGAAATACGCGAATATTAGAAAACCACCGCGATTTGTGG
TGGCGCAATTTTTGGAGGATGTGAGAAAGGTGATGGGCATTCCCGAGTGGATGCTATCAATCGATGGTAGAAAGACAAAG
ATATTACATAACGGCGCGTGCATTCAATTCCTCCTGCATTTTAAAGGTCCAATTGCCAATAAATTGGACCAAGACTTTAG
CAAGCTCATATCCACCGGTAAACTCGAGGCTCCTAGTTTGTATATTCCTGGATACATACCGACGAAGAGGAAAAGTACGC
TAGGACATCGACAGTGCGGCACACGTGATCCGAATGATAAAAATTTGGACAGCTACCGCAGCAAATCCGTCTCGTTGTTA
CCGGGGATATCTGTATTCTTGATAATA
PEP: 
>LH12163-PA
MQWLLLLCCVTVASSLRLAAYISSGGLHGEIRFEKITESSVRIRYSLKPTLQYPDQLWLWSITQFPVDYTIIDGRCDKRH
IGESIIDLTEKIGPLELPANQTGSIEVTDLFLTGELGLWGKALVLKDNYSPRTICASITVLERNVEKFAQARFYGPIAGT
ILFRWLGGQTGDPTDTIIHTNLHHVHKQKLQSLNYTEHHWKIYVTDIFETGKDKDNCNILQNVFDPNNSGVGESIGDVDI
RLGKIKVAVDAQEKYKTFYRDPELSLLPADLLGPHRHLYLVIFHPMHEDSFLACAKINHRKPIHTKAVINSHGIKGEITA
IQETPFDPTWINISLTTTNDLETRLRYATKVASYKIHELPPEPAKSVGFTVDSCLTTKKMFNPSNIDEKIVPPAGLGTQD
QYAIGDLSGKLQGRKEGSYHNDILPGSAKLSGIYWDTYLPLSGVHSIVHRSLVLYKYNETDNKGLIPWVCGTFALYTPYT
DWQMPMYTAKAVFRYPIVGRIVFRQPKDEPEMDTTVIIEHLVHADGNAVNNTADHRWMVHENPPGKDFYNWTGRCLSAGL
PYNPFKVEWSLNSSCLVSETSLCRLGDLTRHGMLDIAGRKVNASEVTRRLFTDTMLPLSGSHTLLGKSLVIYDDHGPVAR
GDRLACSIIGGVYRRKAVVRDWFGNGEQVALEGKLEFLQQTEYDVTNVEVSLEGLGGKMSGYHIHMVIMTYRIKVSSHLY
AQINCTPVEYDLEFPCEGTSLYGHWNPLGVNNSDVPATEEGTLDQYEMGDLSGKFGTLDNKKRQASAYNDTMLPLFGPRS
VLGRSIVIHKKEKNLRWACSTIERGYSPTEASELRAIASFHHPQGFLYGYIKMTRNHNWAIYVNPVGVDATVKVKNTRCV
AGGYIWNPYFTQLADPLNTTFSTYQLNLNRTACNNDSFLVAQEDLYREECGPDLPLRCYVGDISSRLGPVNVGVKRQVFT
DPNFPLGGPISAMGKSIIIFDKDFGSNRFACANIEPDNDIVKYANIRKPPRFVVAQFLEDVRKVMGIPEWMLSIDGRKTK
ILHNGACIQFLLHFKGPIANKLDQDFSKLISTGKLEAPSLYIPGYIPTKRKSTLGHRQCGTRDPNDKNLDSYRSKSVSLL
PGISVFLII
Swiss-ProtSuperoxide dismutase [Cu-Zn]
SUPERFAMILYSSF49329  Cu,Zn superoxide dismutase-like superfamily     
Gene3DG3DSA:2.60.40.200     
PfamPF00080  Sod_Cu; Copper/zinc superoxide dismutase (SODC)     
OrthologiGroup-00183    V-type proton ATPase subunit S1      

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