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Gene detail [Fasta]

Species Linepithema humile
GeneLH11173
Positionscf7180001004434:491088..498053[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH11173
sequence mRNA: 
>LH11173-RA
ATGGCGGAGAAAATGTATTACTGGGGCGAGGAGAAGGATCAAGTCGATCCGGACCAGACCTTCATAGAGTTCAAGGCCAA
ATCGGTGGCGGCGGATAAGAGACGCGAACCGTCACGTACTGTGCCGAAGATGACAGTGTCTTCGCCACAGGGTAAAATGA
CTGAGATTAGTAACAGGGAGGAAGACGCCGAACGCGGCGGATGGGACAATAAACTCGACTTCCTGTTTTCCTGCATAAGT
GTTTCCGTCGGGTTGGGGAATGTTTGGCGATTTCCCTACCTTTGCTATAAAAACGGAGGCGGTGCTTTTCTGATCACTTA
TGGCATCGCAATGCTGTTTTGCGGGATCCCTATATTTTTTCAAGAAGTCGCTATTGGACAATATCTCGGGGCTGGTGGAA
TGTCGCTAGTCGGACAATTGTGTCCTCTTTTGCAAGGTGTGGGATACGCTACTATGACCATTGTATTTTTCCTCGACGTA
TATTATTGCATAATCATAGCTTGGACACTTTTCTACCTCATAAGCACGTTCGTGAATTTGCCCAATGTACCTTGGAGTGG
ATGTGAAAATTGGTGGAACACGGATGATTGTTTCGATGCAGCCAAAGGAAGCCAAGGCATGCACGGAAAAATGAATTGTA
CGAACTCCGTAGAAAATAACAATACCTGCCATCATACTACGCCAGTAGAAGAATATTGGGATCAGCGAGTGCTCGGCATC
ACATCCGGCATCGAGACTATCGGCAAGATCCAGTGGGAGCTGCTAGGCTGCCTGATTGTCGGCTGGCTGCTCGTTTACTT
TATCATCCGGCGCGGTCTACATCAGAGCGGTAAGATCATCTGGTTTTCAGCCTTGTTCCCGTACGTGGTGCTTTTCATTC
TTTTGGGAAGAGCGGTGACGTTGGAGGGTTCCTACGAGGGTTTGCTTTACTACGTGACACCGCGATGGGAGGAATTGCGC
AATCCCGGACCGTGGATAGACGGCGCCACCCAGATCTTCTTCGCGTACAGCATCGGCACCGGCGCGCTGCCCGCCTTGGG
CTCGTACAACAAATTTCATCATAATTGTTATAGCGCTCTACTCTTTAATCACGACGCACTCCACGCAGTGTCGTCGCTGC
TGGAGTCTTTGAAAAAGGGAGTTTTGTCTTGCAGAGACGCAATAATCACTTGCGTAGTCAACACCCTGACGTGTCTTCTG
GCCGGTTGCGTAACCTTTTCGATACTGGGTCACATCGCCCAGGAACAGCAAACGCAGGTGTCCGAGGTCGTCAAGAGCGG
GCCTGGTCTCGTGTTTCTCACGTATCCCGAGGTCGTTCTCAAGCTACCCGGTGCTTCGTTGTGGGCCATTATATTCTTCG
TTATGCTGCTCATACTCGGCATTGACAGTGAATTTTGCATCGTGGAATCTTTCATAACGGGTATGGTTGACTACTGGCCG
GACGTGCTGCGTCCTCACAGGATCAAATTCACCATAGCTATCTGCCTGATAATGTTTCTTCTGGGAATTCCGATGGTCAC
GAACGGTGGAATTTACATCTTCCAACTAATGGACTTCTATTCCGCGAGTGGAATGTCCATTCTGTGGGTATGCTTTTTCC
AGACAATCGCAATATCATGGATTTTCGGAGCGCAGAAATTCTGCGATTGCGTGCATCAGATGATGGGAATTCGATTAAAT
AAGTTCTGGTACATATGTTGGGTTCTACTTGCACCGGTGATCATGCTCTTTATCTTCGTGTTTCAAATCGTGCAATATAA
ACCACTGAAATACGGCAGTAGCTATGAATATCCAACGTGGGCAGAAATAGTAGGCGTGTGCTTGAGTCTCTCCTCAATGA
TATGGATACCAGGTTATGCACTGTATTACGTAATAATCACGCCAGGATCGATAAAAGAGAATATTCTGAAGGGTTTGCAG
CCGAACATAAAATCGCACACAAAGTTACCGAAAGGCGAGAAGTCAGCCGTGATACCCATGTCAGAGAGCAGCGCAGAGCC
GGTAATGTATTCTTCCAATTTTATAGTGATTGTTGCAGAGATCATTGATGTCGAAAATTGA
PEP: 
>LH11173-PA
MAEKMYYWGEEKDQVDPDQTFIEFKAKSVAADKRREPSRTVPKMTVSSPQGKMTEISNREEDAERGGWDNKLDFLFSCIS
VSVGLGNVWRFPYLCYKNGGGAFLITYGIAMLFCGIPIFFQEVAIGQYLGAGGMSLVGQLCPLLQGVGYATMTIVFFLDV
YYCIIIAWTLFYLISTFVNLPNVPWSGCENWWNTDDCFDAAKGSQGMHGKMNCTNSVENNNTCHHTTPVEEYWDQRVLGI
TSGIETIGKIQWELLGCLIVGWLLVYFIIRRGLHQSGKIIWFSALFPYVVLFILLGRAVTLEGSYEGLLYYVTPRWEELR
NPGPWIDGATQIFFAYSIGTGALPALGSYNKFHHNCYSALLFNHDALHAVSSLLESLKKGVLSCRDAIITCVVNTLTCLL
AGCVTFSILGHIAQEQQTQVSEVVKSGPGLVFLTYPEVVLKLPGASLWAIIFFVMLLILGIDSEFCIVESFITGMVDYWP
DVLRPHRIKFTIAICLIMFLLGIPMVTNGGIYIFQLMDFYSASGMSILWVCFFQTIAISWIFGAQKFCDCVHQMMGIRLN
KFWYICWVLLAPVIMLFIFVFQIVQYKPLKYGSSYEYPTWAEIVGVCLSLSSMIWIPGYALYYVIITPGSIKENILKGLQ
PNIKSHTKLPKGEKSAVIPMSESSAEPVMYSSNFIVIVAEIIDVEN
Swiss-ProtSodium- and chloride-dependent GABA transporter 1
KEGG     K05034  SLC6A1; solute carrier family 6 (neurotransmitter transporter, GABA) member 1     
SUPERFAMILYSSF161070  SNF-like superfamily     
PfamPF00209  SNF; Sodium:neurotransmitter symporter family     
ProSiteProfilesPS50267  NA_NEUROTRAN_SYMP_3; Sodium:neurotransmitter symporter family profile.     
PRINTSPR00176     
ProSitePatternsPS00610  NA_NEUROTRAN_SYMP_1; Sodium:neurotransmitter symporter family signature 1.     

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