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Gene detail [Fasta]

Species Linepithema humile
GeneLH23462
Positionscf7180001005056:2316745..2322205[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH23462
sequence mRNA: 
>LH23462-RA
ATGACGAGCAAGAAAAGTCATACCCTCCGCATCGAGTCCGAAATCGATCGAAATCGCGAGGAGGGCAACTGGAAGAAGGT
TATAGAACTGGCTGAACACCTAAAAGTGCAGTACCCCAGCAACGAATGTCTGGCGAATTTCTTGTGCGGAGAAGGAAGAT
TGGAGAGTTTTTTAGAGCAGACTCCAGCGATTGACGCCAATATCAGCAAGGCACGCAACGGATTGGTGGAGACACGAAAA
TACTTGTTATTAGCTGCCAATGAAAAAGATAAACAGGCTTTGGTTGTATTGGATGCTCATCTGCTACTTGGAAAACTTCA
TTATGCGATGGGGATGTATGAGGATGCGCTTCATCATTATCAGGAAGCTGAACTAGACACACTCACAGAAAAGCAATTAC
CGTGTCGAAGTTTACGTATTATAGCAGAATCGTATGCGATCAAAGGTCTCTGTCTGGAGAAGCTGCCACCAAACTCCAAG
TCGAAATACAAGATTGCGGAATGGCACGAACAGATAATCAAATGCTACGAGATCTCCGGCGACTTGACGCTGGTGTATCT
GCAAGAGCAAGAGAAAATCGCTATGCAGCAACAAAATGGTATCTCCACCATAAACACAAATAGTACAAGTACAAGCACCA
CGCAATCTCCCGTTTCCGCGAAGCATATCGGTCCTATTTTAGAAACTGCTTTGCAAAGAGCGCCGATATTGTATATTCAA
ACCGGCAATATACAAGCCGCCGTTAGTCGTTATAGAGAAATTTTATCCGCTGTTGAATCAACGACTACTCAGAGTCTACG
GGTGACGTTGACCAGGCAATTGGCGGAAGCGTTGCTGCGCGGTATAAGCGGTGCTGATTACAAACCACCGGAAGGCCAAA
CCGACACAACGGCCATTGCGAGCAATAGACGGGCGAATCATACGGGTGCTAGTTCATCCGATTCACCGTGGAAACCGAAA
AAATATGCTGGACCCAATATGTTCGTCCCGAAGAACGAATACGAGGAAACGATTCTTCTTCTGTTGATTAGCGAAGCGAT
GGCGGTGAGAGACGCCGTTCTCAGCCAGTCGCCCGAATTCAAGGAAGCGAGGATACATGCATTTGAAAATGCTACCGCCG
TTTACGACCTGCTGACGGTTGTCGTCGTTCGATGGAGTCAAGTAGAACTTCTGCATGAGTCTTTTGAAAGAGCGATGAAA
TTCTCGCACGAGGAGGCGCATGTATGGACGCAATACGCACTGTGTCTGATAAGCATGGGAAGATATATGCACGCGTATCG
AGTCCTCAAGGTAGTTGCCAGGCTGTCACCCCAGAAAGTAATGCCCTGTTTATTGGCCGCGAGGCTGTGCTATGAACAGT
TGAATTTGATCAACGAAGGTGTTGAATGGAGCCAAAAGGCTCTTCAACGAGAGACAGCCAGTCCGCAAGGAATGCAATCC
AGGTGTCACCTGTATATCGGGATCGGCCACAGTATGCTGTCGACGAATACTATTGTGAAACAGGACAAAGTGCACCACAC
AAACACCGCATTGGACTGCTTTCAGAAGGCCCAACAGTGTGATCCGAACGACCATCTGGCGGAGTATTATCTGGCCCACG
AATATGCGATAAACAGGCAAATAGCTGACGCCATTGTGCACGTAAAGATCGCGTTGAATTTACGCGCAGAACACATTCCA
TCGTTGCATTTATTCGCGTTACTCTTGTCGGCTCACAAGCAATATGCGGAGGCGTTGCACGTGATCAACAGCGTGCTGGA
GGAATACCCGGACAATCTAAACTTCCTTTACGTGAAGGCGCATCTCGAATTGCAAAGTATCGGCGGTGTCGAGGCGCTGT
ACACCATCAGCCACATGTTGCACCTGTGGAAAAATCTGTACGAGGATCAGACGAATGTTAATTGTAACGAACAACAGAGC
GAGAAGCGCAGCGAGACTAGAAGCGTCTTTCAGCTTTACACGTCGGAAATGTCCGACAAAGATTCGAGTTCTTTGCATGC
ACAATCGCTAGCCGCATCAAGAGTTGAGCAGGCTCTTTCCGAAGTTGCCTCGTCAATCAGCTCGTTCACACCGAAGCCGG
GGCCGCAGAGAGCGTGGCTGTTGCAATTGCAAATCTGGCTCCTGCTCACGGAAGTTTTCCTCATTCTGGACCAACCAAAC
GGCGCGGTTCTGTCTCTCCAAGAGGCCACCAATATCTTTCCGCTGAGCCATCATATTATGTACACGCGTGGCCTTCTACA
CGAATACAAACTGGAGTATACGGAAGCGAAGCAGTGCTATCAAAACGCTGTTTCGATTAATCCTTCGCACATAAAGAGTT
TACAACACTTGGGACTTGTTTATCATTATTTGGGTAGTCAGAGACTAGCTGAGAAAACCTTGAGGGATGCTGCGAAGATC
GATCCGAATTCCCATCAGACTTGGTACAACCTGGGAATGGTATTGGAATCGTTGGGCGAAGTGGAGGCTGCCAGCGACTG
TATGGCAACGGCGCTGGAGGTCGAAACCACGAATCCCATCTTACCGATTCTATCAATACCGGTGACCTTCGAGTGA
PEP: 
>LH23462-PA
MTSKKSHTLRIESEIDRNREEGNWKKVIELAEHLKVQYPSNECLANFLCGEGRLESFLEQTPAIDANISKARNGLVETRK
YLLLAANEKDKQALVVLDAHLLLGKLHYAMGMYEDALHHYQEAELDTLTEKQLPCRSLRIIAESYAIKGLCLEKLPPNSK
SKYKIAEWHEQIIKCYEISGDLTLVYLQEQEKIAMQQQNGISTINTNSTSTSTTQSPVSAKHIGPILETALQRAPILYIQ
TGNIQAAVSRYREILSAVESTTTQSLRVTLTRQLAEALLRGISGADYKPPEGQTDTTAIASNRRANHTGASSSDSPWKPK
KYAGPNMFVPKNEYEETILLLLISEAMAVRDAVLSQSPEFKEARIHAFENATAVYDLLTVVVVRWSQVELLHESFERAMK
FSHEEAHVWTQYALCLISMGRYMHAYRVLKVVARLSPQKVMPCLLAARLCYEQLNLINEGVEWSQKALQRETASPQGMQS
RCHLYIGIGHSMLSTNTIVKQDKVHHTNTALDCFQKAQQCDPNDHLAEYYLAHEYAINRQIADAIVHVKIALNLRAEHIP
SLHLFALLLSAHKQYAEALHVINSVLEEYPDNLNFLYVKAHLELQSIGGVEALYTISHMLHLWKNLYEDQTNVNCNEQQS
EKRSETRSVFQLYTSEMSDKDSSSLHAQSLAASRVEQALSEVASSISSFTPKPGPQRAWLLQLQIWLLLTEVFLILDQPN
GAVLSLQEATNIFPLSHHIMYTRGLLHEYKLEYTEAKQCYQNAVSINPSHIKSLQHLGLVYHYLGSQRLAEKTLRDAAKI
DPNSHQTWYNLGMVLESLGEVEAASDCMATALEVETTNPILPILSIPVTFE
Swiss-ProtTetratricopeptide repeat protein 7B
SUPERFAMILYSSF48452  TPR-like superfamily     
Gene3DG3DSA:1.25.40.10     
PfamPF13414  TPR_11; TPR repeat     
SMARTSM00028     
ProSiteProfilesPS50005  TPR; TPR repeat profile.     
OrthologiGroup-00698    Tetratricopeptide repeat protein 7B      

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