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Gene detail [Fasta]

Species Linepithema humile
GeneLH23332
Positionscf7180001005056:1482959..1495054[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH23332
sequence mRNA: 
>LH23332-RA
ATGAAGAGCCTGGTGGGGATCATGTGGATAGTGTTGGTGCTCATATCAGGATGCTCAGGAAATCCAGACGCGAAACGATT
ATACGACGACCTCCTGTCGAACTACAACAAGCTGGTTCGTCCAGTGGTCAACGTCACAGACGCCCTCACCGTTAAAATAA
AGCTCAAGCTTTCGCAGCTCATCGACGTGAATTTGAAGAATCAGATCATGACGACAAACCTCTGGGTCGAGCAGTCATGG
TATGATTATAAGTTGAAATGGGAGCCGAAGGAGTACGGCGGGGTGGAGATGCTGCACGTACCGTCGGATCATATATGGAG
GCCCGATATAGTTTTATACAACAACGCCGACGGTAACTTCGAGGTGACGCTGGCGACGAAGGCGACTCTCAATTACACGG
GTAGGGTCGAGTGGAAGCCGCCGGCGATTTATAAGTCTTCCTGCGAGATCGATGTCGAATATTTTCCTTTCGACGAACAA
ACATGCGTAATGAAGTTCGGCTCGTGGACTTACGACGGCTTCCAGGTCGATCTTAGACACATTGACGAGGTCCGGGGCAG
CAATGTCGTCGACATCGGCGTCGATCTGTCGGAATTTTACACTTCCGTCGAATGGGACATCCTTGAAGTCCCTGCTGTAA
GGAACGAAAAGTTTTACACGTGTTGTGACGAGCCTTACCTCGACATCACCTTCAACATCACTATGAGACGGAAGACTCTG
TTCTACACCGTCAATCTCATCATACCGTGCATGGGGATATCCTTTCTCACGGTACTGGTGTTTTACCTGCCAAGCGACAG
TGGAGAAAAGGTCAGCTTATCCATCTCGATTCTATTGTCGCTGACTGTGTTCTTCCTCTTGCTGGCCGAGATCATCCCGC
CCACGTCGCTCGTGGTACCGCTGCTCGGTAAATTCGTCCTGTTCACTATGATCCTCGACACTTTCAGTATATGCGTAACA
GTGGTGGTCCTAAACGTTCACTTCCGCTCGCCGCAGACCCACGTGATGGCACCGTGGGTCCGACGCGTATTCATCCACGT
TCTGCCGAGGCTGCTGGTAATGCGCAGGTATAATACGCCGACGCAGAGAACCGATTACGATTCCAGGCAAGATATATTCT
TCCGGCACTTGTGGTCCGGTTATTGGAACCGCGCCAGTGCGGGCGTTAAAGCACTTATTAGCGCTTCCTCATGCACGCCG
CAATTCCAGATAGACAAGCGTAGCATGGGCGGTCATCATGGGCATCGCGTGATGGTCAGAACATGCAACGGTCTCGAGCT
GCGAGACCCATCACTGTTCGTCGAGACATCGGCCTCGGAGCTGGTCGAGTCCTCCGTGCTTTTTCCTAGTGTCGATTCAC
GGGACGAGCTGCATCCTCGGGAGTTGGAGGCAGTAAATTTAGGAAGCACGTGTCGCATCCACGGTTCGCCAGCGGCAACG
GCCGCGCCACCGCCACAGCTCCCGACGGAGGAGAGCGTCGACGCTCTCTGCAACACGCTTCACCATTGGCATCACTGCCC
AGAATTGTACAAGGCCATCGAAGGCATTCGCTTCATCGCCGATCACACGAAGAGGGAAGAAGATTCCACTAGAGTCAAGG
AAGACTGGAAGTACGTCGCGATGGTGCTCGACAGATTGTTCCTCTGGATCTTCACGCTAGCCGTGGTTGTCGGCACTGCC
GGGATTATACTGCAGGCACCAACCCTGTACGACGATCGCATCCCCATCGACGTACGGCTCTCCGAGATCGCCTCCACCAC
TGCCAAGCCACACATTGTCACGAGCCTCTAA
PEP: 
>LH23332-PA
MKSLVGIMWIVLVLISGCSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQSW
YDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQ
TCVMKFGSWTYDGFQVDLRHIDEVRGSNVVDIGVDLSEFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTL
FYTVNLIIPCMGISFLTVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVT
VVVLNVHFRSPQTHVMAPWVRRVFIHVLPRLLVMRRYNTPTQRTDYDSRQDIFFRHLWSGYWNRASAGVKALISASSCTP
QFQIDKRSMGGHHGHRVMVRTCNGLELRDPSLFVETSASELVESSVLFPSVDSRDELHPRELEAVNLGSTCRIHGSPAAT
AAPPPQLPTEESVDALCNTLHHWHHCPELYKAIEGIRFIADHTKREEDSTRVKEDWKYVAMVLDRLFLWIFTLAVVVGTA
GIILQAPTLYDDRIPIDVRLSEIASTTAKPHIVTSL
Swiss-ProtAcetylcholine receptor subunit alpha-like
KEGG     K05312     
SUPERFAMILYSSF63712  Nicotinic receptor ligand binding domain-like superfamily     
Gene3DG3DSA:1.20.120.370     
PfamPF02932  Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region     
ProSiteProfilesPS51257  PROKAR_LIPOPROTEIN; Prokaryotic membrane lipoprotein lipid attachment site profile.     
PRINTSPR00252     
ProSitePatternsPS00236  NEUROTR_ION_CHANNEL; Neurotransmitter-gated ion-channels signature.     
TIGRFAMTIGR00860     

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