Warning! We strongly recommend Internet Explorer (9.0 and later) and Google Chrome for better display.

Gene detail [Fasta]

Species Linepithema humile
GeneLH22977
Positionscf7180001005039:76382..79304[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH22977
sequence mRNA: 
>LH22977-RA
ATGGATATTGAACACGTATTACAAAACGATATTAGACAATGCTTGCAAATGATAGTGTCGGGAAACCACGCTGCCGTCAA
CGATGGTTGGTTAATGCTGATCAATCTACGAGATAGTCAAGAATTTGGCCAGCTGATCGATTATGAGGATATGCTAAGGG
ACATCCTCAAGAGTCAGGTGTTGAACACGTCGGAAGTGCCGAAAATTATGGCGTGGCTGGCACCGTATATAGTAGAAAAA
CGCTCCGTCAGTCCAATCTCCAACGATGTCGCTTTATTATTACGGAATACCGATATCAAAGACATGTCGCACTTGACCGA
ACTCCTGGATACAATGGTGAGCAACAGAGTGTACCTTTCAAGATCGGCGAATCATACGAAACTCTGCGAGGCGATAGTCA
TAAGTTTGTCTTCCTTTCAAATGCCCTTCGAGGCGAAAAAAATTCACGAGTTCAACGACAACACTATCAAGATTCAAAAT
TTTCTCAAAGTGCTATGTTCAAACACAAAGAACGGAGAACGTGACATTGTAATATTTACTTGTCTTCAAACTTTATACAA
TATAATATCAGATGTAAACAGAAAACAAGAACCAGGCCCAGGACTCGCTGCCATACTGCAGTTGGTGGATTCTTCTGTTA
TTCCACAGGCAGTGGATTGGATTCTGTCACAATCACATTCTGATCATCAATTAGTGCAAGCCTTGAAAGTTTTATGCAAC
TGGCTTCCAAAATATAATGGAGATCGACTTAGCGTCTGGATAATGGAGTTCATACGTGGTTTGGAAAAGCAACAAAAATA
CTCGATTCTTCTTGAACTTACAGAATCCTCAGTAGATTTATTAGTATTAATGTGCAGTGTGTTGATGGTACCAGTAATTC
GTCAAAATGCTTCCAACATTATATTTTATATTTTAAAGAGACAAAGCTCGCCATCAATTGTTCAAAATATAGTTAAGAGA
ATACCAAAATTGATAAGAGACCTGATGAAGGAAGATTCAGATTCTAGTAAAGAATGTATACAGAATTTAGTCGACATTAT
GAAAGTATATAGCAAAAGATTTTCAACATGTATACCAGCATGTGGAAGTACAGAAAATTATCCTTATCCCGTGTTACCAC
AGATGCAAGTTGTCAAAGAACTTTACAGAGAGCCAATATGGAAAGATGAGACAAAGGAATTCGAACCAATTGTGGAACCG
GAAAGACAGTTGTCCGGAAAAGTTGGACTCTCTAATCTTGGAAACACTTGCTACATGAATAGTGTACTCCAAGCTTTATT
AATGACCAGACAATTCTGCCAAGAAGTATTAAATTATCATCCTACAAACGAAGCGGGAAAAACACCATTATTAGAGAAGC
TTCAAAATTTGTTTGCACTACTACTGCACTCCAAGAGATTATGCTTAGCACCGACAGAAGTTTTACGAGCATCAAGACCT
ACGTATTTTCTTCCCGGACAGCAGCAGGACAGCTCGGAATTTCTCTGTCATCTTCTGGATGTTTTACACGAGCAAGAAAA
ATCTGCTAATACAAACTGTGGAGGAAATGATAATGCAGCAACTCTTAAATGTAAAATGGAGAAGCAAGATGATGATATGA
CATTGTCGATGGAACCAACAAAGGGCGTCATCAAGCGTTGGACGACCGAGGAAGATCTGACAGAAGGTTTGGCGTTGCAA
CGGAAAACGCAATCATTGGCCGATTTCACACGAGGCGAAGAGCTAGGACAACGGCTCAGCGATTCTCACTCGGATTCGAC
AGATAGCGGTATACAGTCAGTTGGTGGAGAAGAAACGAACACATATACATCCCTTGTACATAGGGTACTGGGCGGAGAGT
GTCAAATCACCTACCAATGCGCGCAATGTGACACCAGCTCTCGCAATACGGACAAATTTCGCGACTTGCAATTGTGCTTC
CCCGAGGAGATACAAGAGAATCAGGAAGTCTCCGTTCAGGATCTCATAAATTATTATCTCACGCCGGAGAAGCTAACGGG
CGAGAACAAATATCGATGCGACAAGTGTACGAAATTGTGCGATGCGCAGAGGATTATCACAATTCTGCAGGCACCTGCAC
ACTTGGTTTTAACGTTAAAACACTTCCGATACGATTTCGACACTCGATTAAGGACGAAACTTCGACATAAGGTAGTATAT
AACGATACCATACAGTTGCCGGTATCGGCGATATCGTGTACTATAGCCGAGACGTATCAATTATATGCTGCTGTTGTACA
TTCTGGATACAGTATGGATTACGGACATTATTTCACGTACGCCTGTGATTCTAAGCAGAATTGGTACAAATTTAACGACA
ATTACGTACGACAGACCACGTTCGAGGATTTCAAGAGTTTGAAACCCCCGGACACGCCCTACATATTGTTTTACGTAAAA
TCGGGAACTCACGACGGAATCTACGAAGACGACAAGCCCGAATTGTCCACTCTTAGTAAACGTCTGCAGGAATTGATAGC
AAATGACACCACCGATTATATAGAAGAGCTGAGACGTCAAGCAGCAGCATCGCAACGTAGCCAGCTTCCAACGAGATCTT
TGAGGCAGCATAACAATTCCGACGATGATAATCCGCCACCTAGCAGCTGTCGCGGTGCAACCGATATCCCGGTGAATCGC
TATCTCTATTAA
PEP: 
>LH22977-PA
MDIEHVLQNDIRQCLQMIVSGNHAAVNDGWLMLINLRDSQEFGQLIDYEDMLRDILKSQVLNTSEVPKIMAWLAPYIVEK
RSVSPISNDVALLLRNTDIKDMSHLTELLDTMVSNRVYLSRSANHTKLCEAIVISLSSFQMPFEAKKIHEFNDNTIKIQN
FLKVLCSNTKNGERDIVIFTCLQTLYNIISDVNRKQEPGPGLAAILQLVDSSVIPQAVDWILSQSHSDHQLVQALKVLCN
WLPKYNGDRLSVWIMEFIRGLEKQQKYSILLELTESSVDLLVLMCSVLMVPVIRQNASNIIFYILKRQSSPSIVQNIVKR
IPKLIRDLMKEDSDSSKECIQNLVDIMKVYSKRFSTCIPACGSTENYPYPVLPQMQVVKELYREPIWKDETKEFEPIVEP
ERQLSGKVGLSNLGNTCYMNSVLQALLMTRQFCQEVLNYHPTNEAGKTPLLEKLQNLFALLLHSKRLCLAPTEVLRASRP
TYFLPGQQQDSSEFLCHLLDVLHEQEKSANTNCGGNDNAATLKCKMEKQDDDMTLSMEPTKGVIKRWTTEEDLTEGLALQ
RKTQSLADFTRGEELGQRLSDSHSDSTDSGIQSVGGEETNTYTSLVHRVLGGECQITYQCAQCDTSSRNTDKFRDLQLCF
PEEIQENQEVSVQDLINYYLTPEKLTGENKYRCDKCTKLCDAQRIITILQAPAHLVLTLKHFRYDFDTRLRTKLRHKVVY
NDTIQLPVSAISCTIAETYQLYAAVVHSGYSMDYGHYFTYACDSKQNWYKFNDNYVRQTTFEDFKSLKPPDTPYILFYVK
SGTHDGIYEDDKPELSTLSKRLQELIANDTTDYIEELRRQAAASQRSQLPTRSLRQHNNSDDDNPPPSSCRGATDIPVNR
YLY
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 38
KEGG     K11854     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:2.20.210.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
ProSitePatternsPS00972  USP_1; Ubiquitin specific protease (USP) domain signature 1.     

You might be interested in these researchers

You might be interested in these references