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Gene detail [Fasta]

Species Linepithema humile
GeneLH11916
Positionscf7180001004573:323627..362799[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH11916
sequence mRNA:
>LH11916-RA
ATGTCCGAAGATTCTGACTCTATATCAGAGGAAGAAAGAAGTTTGTTCCGTCCGTTCACGCGGGAGTCCCTGGCAGCGAT
CGAGTCTCGCATTGCCGAGGAAGAGGCCAGGCAGCGGGAGCTTCAGCAGAGAAGAGCGGAAGGCGAGGTACGATATGACG
ACGAGGACGAGGACGAAGGTCCTCAGCCGGATCCGATGTTCGAGCAGGGGGGGCCGCTCCCCGTCCGAATGCACAACGAC
TTTCCACCCGAGTTGTCCTCCACACCTCTCGAGGATATTGATACCTTCTACCACAATCAAAGGACCTTCGTCGTCATTAG
CAAGGGGAAGGACATATTCAGGTTTTCGGCGACGGATGCGATGTGGTTGCTCGACCCGTTCAACCCTATACGTCGCGTCG
CCATTTACATACTGGTTCATCCGATCTTTTCCCTCTTCATCATCACCACGATATTGGTTAACTGTATACTCATGATCATG
CCCACCTCGCCCACCATCGAGTCCACCGAAGTGATATTTACGGGCATCTACACATTTGAGTCCGCCGTTAAGGTGATGGC
GAGGGGTTTCATTCTGCAGCCTTTTACCTATCTTAGAGATGCATGGAATTGGCTCGACTTCGTAGTTATAGCTTTAGCTT
ATGTGACGATGGGCATAGATCTAGGCAACCTTGCCGCTCTCAGGACATTTCGAGTCCTCCGAGCCTTGAAGACTGTCGCT
ATTGTACCAGGTCTGAAAACCATTGTCGGCGCTGTGATAGAATCCGTGAAGAACCTGCGCGATGTGATAATCCTGACGAT
GTTCTCCCTCTCCGTCTTTGCGCTGATGGGCCTTCAGATTTACATGGGGGTCCTCACGCAAAAGTGTATAAAGAACTTTC
CTGAGGACGGCTCCTGGGGCAACCTGACCAACGATAATTGGGTGAAATTCGTTAGTAACGAATCTAATTGGTACAGGGAC
GAGGCTAAAAATATGCCTTTATGTGGAAATTCATCGGGAGCGGGGCAATGTCTGCCCGGCTACACGTGTTTACAAGGGTA
CGGCGGTAATCCGAATTACGGTTACACGAGCTTCGACACCTTCGGCTGGGCATTGCTCTCCGCCTTTCGTCTCATGACTC
AGGACTACTGGGAGAATCTCTATCAATTGGTGCTAAGATCAGCCGGGCCGTGGCACATGCTCTTCTTCATCGTCATCATC
TTCCTCGGCTCTTTCTATCTCGTGAACTTGATTCTCGCTATCGTCGCGATGTCGTACGACGAGTTGCAGAAGAAGGCCGA
GGAGGAGGAGGCTGCCGAAGAGGAAGCTATGAGGGAAGCCGAGGAAGCCGCGCTGGCGAAGGAGAACAAGCTCGCCGCGC
AGGCCGCCGCGCGGGAAGCCGCGGCCGTGGCGGCGGCCGCCGCGGCGGCCGCGGATCAGATCGTCAAGTCCCCGTCGAAC
TTCTCGTGCCAGAGCTGCGAGCTGCAGCTCTACATCCAGGAGAAGGGCAACGACGACAACAACAAGGAGAAGATGAGCAT
ACGCTCGATCGAGTCCGCCGGCGACCAGCGGCACGTCAAGCAGATCAACAACAACCACAACGCTGCCAATAAAGCGCGAA
AAGTCAGCGCCGCGAGCCTGAGCCTACCCGGCTCACCGTTCAATCTGCGCCGCAGCAGCCGTGGCAGCCACCAGTTCACG
ATACGCAATGGCCGCGGCCGGTGCTTCGTGCCGCCGGGCGGCGACCGGAAGCCCCTCGTGCTGTCGACGTACCTGGACGC
CCAGGAGCACCTGCCGTACGCCGACGATTCGAACGCGGTCACGCCGATGTCCGAGGAGAACGGCGCGATCGTCGTGCCGG
TGTACTACGCGAACCTCGGCTCGCGTCACTCGTCCTACACCTCGCACGCCTCGCGGCTCTCCTACACGTCCCACGGCGAC
CTGGCCTTCCCCGGTATCCGTGGCATCGACAGCATCGGCAAGCAGCTCACCAAGCAGGAGCAGATCCTCAGGAATCGCAA
CAACAAGCAGACGACGCCCGCGAACGGCCACGTCACGGACACCAATCAAAAATCCTATCACTTCGAAACCGATCTGGAGG
ATCCCATGGGCAAGACCAAGCAACAAGACAATCCGTTCATCGAGCAGTCGCAGCAGCACACCGTCGTCGACATGAAGGAT
GTAATGGTGCTGAACGACATCATCGAGCAGGCCGCCGGTCGCCAGAGCCAGACGCCGGAGCAAGGAGACGACGATGAAGA
AGGGCCTACGTTCAAGGACAAGTTATGGGCCGGATTGCTACGTTGTATCGACATCTTTTGCGTCTGGGACTGCTGTTGGC
TCTGGCTTGAATTTCAAAAGTACGTGTCCTTGTTGGTGTTTGATCCGTTCGTAGAGCTCTTCATCACACTCTGCATCGTT
GTCAACACGCTCTTTATGGCTCTGGATCACCACGACATGGACAAAGATATGGAAAGGGTGCTCAAATCTGGCAATTACTT
CTTCACGGCAACATTCGGCATCGAAGCGGGTCTGAAGCTGATAGCGATGAGCCCGAAATATTATTTTCAAGAGGGCTGGA
ACATCTTTGATTTCCTCATCGTCGCTCTGTCGCTTCTGGAATTGGGCTTGGAAGGTGTGCAAGGTCTGTCGGTATTGCGA
TCCTTCAGATTGCTGAGAGTGTTCAAGCTGGCTAAATCATGGCCTACGCTGAATCTGCTGATCTCCATCATGGGCAAGAC
GGTGGGCGCGCTGGGTAATCTAACGTTCGTACTGTGCATCATCATCTTCATCTTCGCCGTGATGGGCATGCAGCTCTTCG
GTAAGAACTACACCGACAACGTCGACCGCTTCCCGGACGGCGACCTGCCCAGATGGAACTTCACCGATTTCATGCACTCC
TTTATGATCGTGTTCCGAGTGTTGTGCGGGGAGTGGATCGAGTCTATGTGGGATTGCATGCTCGTCGGCGACGTCTCTTG
CATACCGTTCTTCTTGGCCACCGTCGTCATCGGTAACTTGGTTGTCCTGAATCTCTTCTTAGCTCTGTTGCTCAGCAACT
TCGGCTCGTCGAATCTGTCGGCCCCGACTGCGGACAACGACACGAACAAGATCACGGAGGCGATAGATCGAATAGCACGT
TTCATTAAATGGATCAAGCGAAATGTTCTTTACATTGCTAAGTTGATGCGAGCCAAATTCACCAACCAGATATCCGATCA
GGCGCCAGATGGGATTGATCGCGATGGGGACCTAGATCTTGCAGATGGAGAGCTGGACGCGTACAGAGACAAGAAGAGCG
CCAAAGAGCTTAATCAACTTGAAGTCGCCATTGGCGACGGGATGGAGTTTACCATTCACGGAGATTTGAAGAACAAGCTG
AAGAGAGGCAAGCTGTGCATGAACAATACGAAGGTTATCGCAAATTCAATAAACCATCACGATTATAGGCTGGACAACGA
TTACATTAATCAGAACGAAGACGACACTATCAGTAATAAATCATACGGCAGTCACAAAAATCGCGCGTTCAAGGACGAAA
GCCACAAAGGCAGCATGGACTCGCTGAACGGCGAGGAGAAGAAGGATGCGAGCAAGGAAGACTTGGAGCAGGAAGAAGAT
CTCGAAGACGAGTGCGAAGAAGAGGAAGAGGGCGACGTCGTGATCATACACGCGGATGACGATCCTATTCAGCCGAATTA
TCCCTCCGATTGCTGTCCGGAAAATTGCTACAAAAAGTTTCCATTCCTCGCCGGCGACGACGACGCGCCGTTCTGGCAAG
GCTGGGCGAACCTGAGATTGAAAACCTTCCAGCTGATCGAGAACAAGTACTTCGAGACTGCCGTCATCACCATGATTCTT
CTGAGCAGTTTGGCCTTGGTGAGCTTATCGATTGCTTTTCATTTCGTCATTCAGGAAAGCATTCGGCAAGCGGCTAATCA
AAACGATTTGCAGGCCTTGGAGGACGTTCATCTTCAATCTCGACCTGTTCTGCAGGACATATTGTACTACATGGACCGAA
TATTCACTGTGATCTTCTTCCTCGAGATGTTGATCAAGTGGCTAGCTCTAGGATTCAGGAAGTATTTCACAAACGCCTGG
TGCTGGCTCGACTTCATCATCGTCATGGTAGTCGTCAACGCCTTGGTCCAAGCCATTCCATCCATCTTCAACGTGTTGCT
GGTATGCCTTATTTTCTGGCTTATATTCGCTATCATGGGGGTGCAACTGTTTGCTGGCAAATATTACAAAGTCGGTAAGC
AGCCGATTCGTGAAACGAACATTTACATGTATCTCTACTTCGTGTTTTTCATTATATTTGGATCGTTTTTTACCCTCAAC
CTATTCATTGGTGTGATCATCGATAACTTTAATGAGCAAAAGAAGAAAGCCGGCGGTTCCCTCGAAATGTTCATGACAGA
AGATCAGAAGAAATATTACAATGCCATGAAAAAGATGGGCAACAAGAAGCCTCTGAAGGCGATTCCTCGACCGAGGTGGC
GGCCGCAGGCGATAGTGTTTGAAATAGTGACGGACAAAAAGTTCGATATGATAATCATGCTGTTCATCGGGCTGAACATG
CTCACGATGACATTGGACCATTATCAACAGAGCGAAACGTTCAGCAATGTTCTGGACTATCTCAACATGATATTCATTGT
GATATTCACCAGCGAGTGTCTCATGAAGATCTTCGCTCTGCGCTACCACTACTTCAAGGAGCCATGGAACCTCTTTGATT
TTGTTGTTGTTATATTGTCAATATTAGGTCTGGTGCTCAGCGACATCATCGAGAAATACTTCGTGTCGCCGACTTTGCTT
CGTGTGGTGAGGGTGGCGAAGGTCGGCCGTGTACTTCGACTCGTGAAGGGCGCCAAGGGTATCCGAACCCTTCTCTTCGC
CCTAGCGATGTCACTACCGGCCCTCTTCAATATTTGCCTATTGCTGTTTCTGGTGATGTTTATCTTCGCGATATTCGGCA
TGTCCTTCTTCATGCACGTCAAGGACAAGAGCGGACTGGACGACGTGTACAACTTCAAGACGTTTGGACAGTCGATGATA
CTGCTGTTCCAGATGTCAACGTCGGCAGGCTGGGACAGCGTCCTCGATGGCATAATAAACGAGGAGGATTGCCAGGAGCC
GAACAACGAGATCGGTTACCCGGGCAACTGTGGCTCGTCGACGATCGGAATCGCCTACCTGCTCTCGTACCTCGTGATCA
GCTTTCTGATCGTCATCAACATGTACATCGCCGTGATCCTCGAGAATTACTCGCAGGCGACCGAGGACGTGCAGGAGGGC
CTGACGGACGACGACTACGACATGTACTACGAGATCTGGCAACAATTCGATCCGGATGGCACGCAATATATACGATACGA
CCAGCTGTCGGAATTCCTCGACGTATTGGAGCCCCCGCTACAAATACACAAGCCGAACAAGTACAAGATTGTGTCGATGG
ATATCCCCATATGTAAGGGAGACCTTATGTTCTGCGTGGACATCCTCGATGCCCTCACCAAGGACTTTTTCGCGCGGAAG
GGCAATCCAATAGAGGAGACGGGCGACCTCGCCGAGGTGCAGGCGCGGCCCGACGAGGTCGGTTACGAGCCGGTCTCGTC
CACGCTGTGGCGGCAGCGCGAGGAGTACTGCGCCCGCCTCATACAGAACGCCTGGCGGAAGCACAAGCAGCAGCGCCTCG
GCGGGCCGAGCGAGGAGAGCGACGATCCGGACACGGATCTGTGCGTGCGGCAGACCAAGGTGCTGGTTGAGAGCGACGGC
TACGTCACGAAGAACGGCCATCGCGTCGTTATACACAGCCGATCGCCGAGCGTCACCTCGAGAACCGCGGACGTCTGA
PEP:
>LH11916-PA
MSEDSDSISEEERSLFRPFTRESLAAIESRIAEEEARQRELQQRRAEGEVRYDDEDEDEGPQPDPMFEQGGPLPVRMHND
FPPELSSTPLEDIDTFYHNQRTFVVISKGKDIFRFSATDAMWLLDPFNPIRRVAIYILVHPIFSLFIITTILVNCILMIM
PTSPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVA
IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKNFPEDGSWGNLTNDNWVKFVSNESNWYRD
EAKNMPLCGNSSGAGQCLPGYTCLQGYGGNPNYGYTSFDTFGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVII
FLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAMREAEEAALAKENKLAAQAAAREAAAVAAAAAAAADQIVKSPSN
FSCQSCELQLYIQEKGNDDNNKEKMSIRSIESAGDQRHVKQINNNHNAANKARKVSAASLSLPGSPFNLRRSSRGSHQFT
IRNGRGRCFVPPGGDRKPLVLSTYLDAQEHLPYADDSNAVTPMSEENGAIVVPVYYANLGSRHSSYTSHASRLSYTSHGD
LAFPGIRGIDSIGKQLTKQEQILRNRNNKQTTPANGHVTDTNQKSYHFETDLEDPMGKTKQQDNPFIEQSQQHTVVDMKD
VMVLNDIIEQAAGRQSQTPEQGDDDEEGPTFKDKLWAGLLRCIDIFCVWDCCWLWLEFQKYVSLLVFDPFVELFITLCIV
VNTLFMALDHHDMDKDMERVLKSGNYFFTATFGIEAGLKLIAMSPKYYFQEGWNIFDFLIVALSLLELGLEGVQGLSVLR
SFRLLRVFKLAKSWPTLNLLISIMGKTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDGDLPRWNFTDFMHS
FMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSNLSAPTADNDTNKITEAIDRIAR
FIKWIKRNVLYIAKLMRAKFTNQISDQAPDGIDRDGDLDLADGELDAYRDKKSAKELNQLEVAIGDGMEFTIHGDLKNKL
KRGKLCMNNTKVIANSINHHDYRLDNDYINQNEDDTISNKSYGSHKNRAFKDESHKGSMDSLNGEEKKDASKEDLEQEED
LEDECEEEEEGDVVIIHADDDPIQPNYPSDCCPENCYKKFPFLAGDDDAPFWQGWANLRLKTFQLIENKYFETAVITMIL
LSSLALVSLSIAFHFVIQESIRQAANQNDLQALEDVHLQSRPVLQDILYYMDRIFTVIFFLEMLIKWLALGFRKYFTNAW
CWLDFIIVMVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYYKVGKQPIRETNIYMYLYFVFFIIFGSFFTLN
LFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGNKKPLKAIPRPRWRPQAIVFEIVTDKKFDMIIMLFIGLNM
LTMTLDHYQQSETFSNVLDYLNMIFIVIFTSECLMKIFALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLL
RVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLDDVYNFKTFGQSMI
LLFQMSTSAGWDSVLDGIINEEDCQEPNNEIGYPGNCGSSTIGIAYLLSYLVISFLIVINMYIAVILENYSQATEDVQEG
LTDDDYDMYYEIWQQFDPDGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIVSMDIPICKGDLMFCVDILDALTKDFFARK
GNPIEETGDLAEVQARPDEVGYEPVSSTLWRQREEYCARLIQNAWRKHKQQRLGGPSEESDDPDTDLCVRQTKVLVESDG
YVTKNGHRVVIHSRSPSVTSRTADV
Swiss-ProtSodium channel protein para
KEGG     K05388     
SUPERFAMILYSSF81324  Voltage-gated potassium channels superfamily     
Gene3DG3DSA:1.20.120.350     
PfamPF00520  Ion_trans; Ion transport protein     
ProSiteProfilesPS50222  EF_HAND_2; EF-hand calcium-binding domain profile.     
PRINTSPR00170     
CoilsCoil

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