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Gene detail [Fasta]

Species Linepithema humile
GeneLH11899
Positionscf7180001004573:12824..27307[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH11899
sequence mRNA:
>LH11899-RA
ATGTGGAGACCTAACAGATTTATTAGTATGCTACCAGCCCTCTGGCCATTAATAGTGTTTAGTTTTCTAGCCAATGCACA
AACGACGAGCTGCAATGGCGGCCAAGGTAGGGTGGTTTACGAAAGACTTCCAGATCAACAGCTTCAGGGTTTCGACGAAG
AAATGGTGCGAGACTCGGCACCTCCGTTTAGGGTTCTGGAAAAGTGTCAAGAGCTGTGTCTGTACGACAGAGCGACGAAC
AATCTGGTCCGCGCGTGCACGAGCTTTGACTTTCAACCCGGCAACAGAATTGCGTCCTTCAGCGGCGCCGCCGAGTACGA
AGAGAGTACTTGCTATTTAACGAGGGAACAGGCGACGCCGGAGGGCATCGGAAATCTTATACTCGTCCCGAATAGCGTGC
ACTTCGCTGAAGTGTGCCTGGCGTCTAACAGAATAGAAAGGGAATGTGCAAATCGTCGCTACGTGTTTGAGAGGCATCCG
AGAAAGAAGTTGAAGTTATCCCTAACAGACATTAAAGAAGTCAGCGCGGCTAACAGAACCGACTGCGAAGACAGGTGTCT
GAACGAGTACAGTTTCGTCTGCCGATCGGCGACATACGACACCGCCCTGAGAAGCTGTTCTCTCAGTCGTTTTACCAGAA
GAACGCATCCCGAATTACTAGAGGACGATCCAAACTCTGATTATTTGGAAAATACCTGCCTCAATGCCGAACGACGATGC
GATGGGCTCATGGTGTTCGTCAAGGAGGAAAACAAACGTTTACGCGGCCCGTTCGAAGTGGATATATACACGAATCTAAC
TTTGGACGAATGTCAAGCGCTATGCCTCAGAGCGGAAAAGTACTTCTGTCGCAGCGTCGAGTTTGACGAGCAAACTCGAC
AATGTGTCATATCCGAAGAGGATTCTGTTTCGCAAAAGGACGATATTGGAATCAGCAGTAGTCCCACTCACCACTTCTAC
GATTTAGTTTGCCTAGATAATCATCCGTCCGTAGCGCGCGGCTCGGAATATCCGGACAGCAGCGGCTCGACGTCGCACCT
GTTCTCCGACGGCCGGCGACCGGACACGGCTTTCCAGCGTTATCGTACTTCACGTCTGAGCGGCGATTTTCACTCGGAGA
TCACCGGGCGCAGCCTAAGCGAGTGCCTGGACGACTGTCTCCGGCAGACGAGCTTTCAGTGCCGCAGCGCCGTCTACTCC
GAACATTATAATATCTGCCGATTGAGTCGATTCAATCAGCGGGACGGCCACAGGATTATCTACGACGCTGATTATGATTA
TTACGAGAATCTCATGCATCAATATCTAGACGGCGATCGCGAAGGTCCTGGCTACAGACCGGATCCCTTGGGACAGGACA
CAAACTTTGGACGACCCTCTCTAGGAAGGCCTGGTTATCCGGACGATTACGACAAAGGATACCCCAACAGCGTCAAGCCG
GATCGCTATCCCGATCGCTTCCCAGATCGCATTCCAGACCGTATTCCGGACCGTTATCCCGACCGTTATCCAGATCGCTA
TCCCGACCGCTATCCAGATCGATACCCCGATCGGCGGCCTATGGACGACAGATATCCGGATACCAGATATCCTGGAATGT
ACCCTTTGGGCGAATCGGATAATTACCCAGACAATTATCCGGATCGGTATCCTCCTGGCGATCGATATCACGATAAATAC
CCCGCCGGCGATCGTTATCCCGCGGGAAATCGTTATCCCACGGAAGATCGTTATCCCGCGGGAGATCGTTATCCCGCGGG
AGATCGTTATCCCGCGGGAGATCGTTATCCCGCGGGAGATCGTTATCCCGCGGGAGATCGTTATCCCGTGGGAGATCGTT
ATCCCGCGGGAGATCGTTATCCCACTGGAGATCGTTATCCAGTTGGAGACCGTTATCCAATTTCTGATCGATACCCTGTT
AGAGGGGGGGATCGTCACCGAGATCCAGCCGGCAGTGATAGATATCCTATTTCCAGTACCGGAACCGTAGACAGATATCC
TACGAACGGCCGATATCCTGTAATACACGGTGTCCGATATCCGTTTACTCCAAGCCGATATCCTGCTGACGTCAATGACC
GATACCCTAATGCGATCGACAGGTATCCTTACCCCGAAGATCCGATGGATCGATATCCCACGGGATTAAGTGGTGACAGA
GCTCCTATCGATCGATATCCAGCCACTGGCAGATATCCTGATCCTAAAGATCCTTACGTCAATCGAAGATCACCGTCTGA
TTTAACAAACAGCAGGTATCCGCCAATGCATGGATTGTATTCTCACGGATTCGTGGACGACGTTCGCGGTCCCCCGAGCC
ATCCCGAACCGCGACCTCACGGCTATGGCAATGGGCCTTACGGCTCGGTGCGGCCCGTCGGAGGATACGGAGGATACGGA
GGATACGGCAGTGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTCGTGGGTGGCGGATACATAGGTGAAGGTGG
TGTCTACAACTCCCGTCCGTTCGGTACCGCCGGCGGACCAATCATAGGCAGACCCCCGTTATTATCCAGATGCGACGAGC
AAGACAATTTTAGACAGGTCGGACCTCACACCAGAGTACGGAAGCCATTCGTCAGACGGCTCACCACCGCCTCGTCGTTG
GCGCAGTGCGAGAGAGAATGTTCTGACGCCAGAGACTTCGTTTGCAGATCCTTCAATTACCGGCCATACGCCGCGCCTTA
CGGGGCCGAGAGGGACAACTGCGAACTCAGCGATCGGGACTCCAGGGACATGGAGATGGGCAGTCCGGTTTATTACGACT
CGAGCTCCGATTACGACTTCTACGAGAGGAACAACGGTCGCCAAGGCGCGGACGGGGAATGTCTGGACGTGAGTCAAGTC
TGTAGCGAGGACGGGATGGAATTTACTCTGCGAACGCCGGAGGGATTTATCGGGCGAATTTACACGTACGGATACTACGA
TCGGTGCTTCTTCCGTGGAAACGGCGGCACCGTCAACGTACTTCGCATCAGCGGACCTCAGGGATACCCCGAGTGTGGCA
CACAGCGATACGGCGATACGATGACAAACATCGTGGTGGTGCAATTTTCGGACTACGTGCAAACCGAGCGAGACAAGCGA
TTCAACTTGACATGCCTGTTTCGAGGACCCGGAGAAGCTGTCGTCACATCCGACTACATCGGTGCCGGATCAGGGTCACC
TATCCCCATCGAATATCTCCCAGCGGAAAACACTCTGAGCTCCAAAGTACTTTTGCAGATCCTCTATCAGAATAGACCTA
CAACTACCATCGCAGTCGGTGATCCGCTCACTTTCAGACTCGTGGCTCAGGATGGTCACAATTACGTAAGAGATATATTT
GCTACCAACGTCGTCGCAAGAGATCCTTATTCTGGTAGAAGTGTTCCACTGATCGACAGACACGGCTGTCCAGTGGACAA
CTACGTGTTTCCGGGACTGGATCGCCTCCGCGACAGCAGCCGTGACGGCCTCGAGGCCCGTTTCAACGCCTTCAAAATAC
CCGAATCGAATTTCCTGGTATTTGAAGCGAACGTGCGAACGTGCCGCGATGGCTGCCAAGCAGCGATTTGCGGTACCGGC
AGGAACAACGAGCCGTCTTACGGTAGACGACGGCGGGACGTAAATAACGACACGCTGGCGGATGAGGACGTAATGTCGTC
GATAACCGTGACAGACGATGACGCTGACAACGCGACCATCGTGGACGACGAAGGGCTGATGGAATCAAGAAGAAATCAAG
AGGACGAAGAGGTGGAGCGTGTCAGAGAAATGATAGAGGTTCGCGATTCGAGAATGGATATCGAAGAGGATGCTGTCGCC
GAGAGGCAAATTAAGATGCCGGAAAATATCTGCATAACGCAGAACGAATACTACGGATTGGTGACGGCGGTTGGAATTCT
CGTCGTTCTCTTAGTTTCCGTTGTTCTCTTATCTATGCTCGTTTACAGGAAACACGTTTACTCCGTGATCATGAAAAATC
GTAGACTCAATAAAAATTGCAACCGCAGCGGTCACTCTGATGAGTCTTACGGCGGCCGAATGAACAACTTTTCTTTCATG
AGGACCGGTCTTCAGAAGCCATTTCAGGCTTCCTCAATCTCAAGATCGATGAGCAACGCCATCAGCCAAAGTCTCGCCTC
GTCGTCGAACGCTCTCGAAGGTGCGGTGGGATTATCCGCCGGTCGGCGCAACGGCTTCGATCCCAGCGAGCCGATCTACA
CCGATCCCTCGCTCTTCGAGGTCACCCCGTGCTCGAATGCCGCGAAATCAGCCTTGAACGACAACTTTCGCCTTATGTAG

PEP:
>LH11899-PA
MWRPNRFISMLPALWPLIVFSFLANAQTTSCNGGQGRVVYERLPDQQLQGFDEEMVRDSAPPFRVLEKCQELCLYDRATN
NLVRACTSFDFQPGNRIASFSGAAEYEESTCYLTREQATPEGIGNLILVPNSVHFAEVCLASNRIERECANRRYVFERHP
RKKLKLSLTDIKEVSAANRTDCEDRCLNEYSFVCRSATYDTALRSCSLSRFTRRTHPELLEDDPNSDYLENTCLNAERRC
DGLMVFVKEENKRLRGPFEVDIYTNLTLDECQALCLRAEKYFCRSVEFDEQTRQCVISEEDSVSQKDDIGISSSPTHHFY
DLVCLDNHPSVARGSEYPDSSGSTSHLFSDGRRPDTAFQRYRTSRLSGDFHSEITGRSLSECLDDCLRQTSFQCRSAVYS
EHYNICRLSRFNQRDGHRIIYDADYDYYENLMHQYLDGDREGPGYRPDPLGQDTNFGRPSLGRPGYPDDYDKGYPNSVKP
DRYPDRFPDRIPDRIPDRYPDRYPDRYPDRYPDRYPDRRPMDDRYPDTRYPGMYPLGESDNYPDNYPDRYPPGDRYHDKY
PAGDRYPAGNRYPTEDRYPAGDRYPAGDRYPAGDRYPAGDRYPAGDRYPVGDRYPAGDRYPTGDRYPVGDRYPISDRYPV
RGGDRHRDPAGSDRYPISSTGTVDRYPTNGRYPVIHGVRYPFTPSRYPADVNDRYPNAIDRYPYPEDPMDRYPTGLSGDR
APIDRYPATGRYPDPKDPYVNRRSPSDLTNSRYPPMHGLYSHGFVDDVRGPPSHPEPRPHGYGNGPYGSVRPVGGYGGYG
GYGSDGGGGGGGGGGGVVGGGYIGEGGVYNSRPFGTAGGPIIGRPPLLSRCDEQDNFRQVGPHTRVRKPFVRRLTTASSL
AQCERECSDARDFVCRSFNYRPYAAPYGAERDNCELSDRDSRDMEMGSPVYYDSSSDYDFYERNNGRQGADGECLDVSQV
CSEDGMEFTLRTPEGFIGRIYTYGYYDRCFFRGNGGTVNVLRISGPQGYPECGTQRYGDTMTNIVVVQFSDYVQTERDKR
FNLTCLFRGPGEAVVTSDYIGAGSGSPIPIEYLPAENTLSSKVLLQILYQNRPTTTIAVGDPLTFRLVAQDGHNYVRDIF
ATNVVARDPYSGRSVPLIDRHGCPVDNYVFPGLDRLRDSSRDGLEARFNAFKIPESNFLVFEANVRTCRDGCQAAICGTG
RNNEPSYGRRRRDVNNDTLADEDVMSSITVTDDDADNATIVDDEGLMESRRNQEDEEVERVREMIEVRDSRMDIEEDAVA
ERQIKMPENICITQNEYYGLVTAVGILVVLLVSVVLLSMLVYRKHVYSVIMKNRRLNKNCNRSGHSDESYGGRMNNFSFM
RTGLQKPFQASSISRSMSNAISQSLASSSNALEGAVGLSAGRRNGFDPSEPIYTDPSLFEVTPCSNAAKSALNDNFRLM
Swiss-ProtCircumsporozoite protein (Fragment)
SUPERFAMILYSSF57414  Hairpin loop containing domain-like superfamily     
Gene3DG3DSA:3.50.4.10     
PfamPF00024  PAN_1; PAN domain     
SMARTSM00473     
ProSiteProfilesPS51034  ZP_2; ZP domain profile.     
OrthologiGroup-00584    Uncharacterized protein PFA0635c      

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