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Gene detail [Fasta]

Species Linepithema humile
GeneLH22635
Positionscf7180001005026:1293686..1301040[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH22635
sequence mRNA:
>LH22635-RA
ATGGAGGAGGCAGAATACGTGGCTCTGATCGAGTGGTACTGCCGCCAGCGTTACTACAACGGCATGCTGGCTCAAGCAAA
GCAGGCGCGCGACGCTCATCCTGGCAGCGAGCGTCTGCGTCTGTTGCTCTGCCTGGCGTACGTTCTTATCGGGAAGAGCC
ACGAGGCCGTGAAGGAGAACACAAGTCTGCTGAACCAAGCGGACTTCACGCTACCGGCATTACTCGTGCAGAGCGTCGCC
TTGGCGGACGGCGACGTGGAGAGGAGTACCGTGAGCCAGATAGAAAACAGGATCCGGGACGAACGCAGAAGAGCCTCCTG
CGTCGCGCTGTGCCTCGCGACGTCTGTGTTGATCCTCTCGCGCAGAGCCGACAAGGCGAAAGAATACGTGGACAGAGCGT
ACAAGCTGAAGCCTACGAATGTTAACGTGCTACTCGTCAAGGGATGGCTGGAGCTCAATCTGAGGTCCGGCGCGGACATC
GCGGAAACGGGGAGCTTTTTCGATTCGGTGCTGAAGGAGGAATCGAGGAATCTGAGCGCGCTGTTGGGCTCCGCGGAGGT
GAAGCGACGCGCCGGCAACCACTCGGAGGCTGTGTCGATACTGAATTCCCTGGTTGTGCGCTATCCTAAGCTGCCTCTGC
CGCTAATAGAGAAGACAAAGTGCCTGCTGGCGGCGAAGGACTGGGAACAGGTGTTGGAGATGGTGAACCGAGTGCTCGTG
ATCGAGTCGAACAACCTGGACGCCATCAAGGCGAGCTCGGTGGTAGCTTTTTGCCGAGATGGTAATCCCGGCGAAGGTCT
GCCGCAGCTGCAGCTGTTCCTGCGCAATCTGTCGCTCGCCGAATCGCGGAACGTGCTGCTGCTGATCGACAATCTACGCT
TGTTCACCGGCGTAGCGTTCCAGGATCACGGAATTCTGTCGGAGCTGGCGCGAGCGGCTGAGAAGATGCTGCAGGCGACG
TCGTCGGGCAGCGCGGAACTCATGTCGGAGCTGGGCGACCTGTACATTGCACTCGGCAATACCAAAGACGCCGAGCGCTG
GTACAAGAACGCTATTCGCGCGGATCAGTCCTCCTTCGCGGCCCTCATGGGACTGGCTCATTGCCAACTGCTGCACGGAT
CTGCGGACGATCTGGACCAGGCGCGCCAGCAGATAGACATCATGATGGAAATTCAGCCGCATTCGACAAACGTGCGGCTG
CTGCTCATGTCTGCCAAGATTGCCGCTAATGAAGATAACAGGAAGACACTTAATTATTTGGATGCGGCGGCAAACCTCTT
GCTAAAAAATTGCGAGGGCCTGCCGTACGGCTACGAATATCTCAGCGAGCTGAGACCCGATCTGTGTCTCGAAATTGCAA
AGCAACGTTTGATGTATTCCCTGAATAAATCACCGATGAGCGATGAGCTGGGCAGAGCAATGGAGAAAGAACCGAGCGTT
CACTTGCTGGAGCGATTAGTGGAGGCCTGTCCGGGTTCCAGCGCGGCTCTGCTACTCCTCAGCAGAGCGAAGATGCAGAG
CGGCGACTACGACGGCGCGTTTGTCCTGCTAAGGACACTGGACGCAGTGGAACCATCCAACGCACAGGCACATCTCGCAA
TGGCGCAGATCCTGGCTTACCAGGGCAAGTATCAGCTCGCCTCGCAGAGTCTGGAAGTCGGTCTGAGCTACAACTTCAAG
ATCCGCGACGAGCCGCTCTACCATCTAATCATCGGCATGGTGCAACGCGAGGCCGGCGACTTGGACAGCTGCGTGAAGAG
CTGCCAGACGGCGATGTCGCTGGCGGGATTGACCGGCAACGTCAGCAGGAAGTCCGACATGTCCACGTCGGACCGCGCGA
GCTTGTACCTCGAACTGATCACCGCGTACAGCAAGGCGAGGCGCTTCGCCGAGGCACTTACGCTTGTCGATGAGGCGAAA
ATGAATCTTGCCGGCACCGCTGAGCTCGGCAGGCTCACCATCGGCGCCGCCGGGGTTCATCTAGACATGGGGGAGCTCGA
AAACGCCGTCGGCTCCTTACAGAGTATTCATCCCGGACAACCGTATTACGTTCAGGCGCACACCAGGCTGGCCGAGATCA
ACCTGAACTACAGAAAGGACCGTCAGGCGTTCGCGAAGTGCTTCAGAATGAGGACTGATAACGGCGACATTCGATGGCTT
TTCAGAGAACTGGTAGAACACTGTCCAGGACCGAGGACATATAGCATGTTAGGCAACGCTTATATATCCATACAGGAGCC
CGAGAGAGCGATAGAGGCGTATGAGCAGGCGCTCTCGCAGAATCCGATTGACAAAGTGGAGATCGCGAACAAGATGGGCA
AGGCGCTCGTCAAGGCGCATCAATACGCGAAGGCGATCACCTATTACAAGGACATAGTAAAACAGGACAATTGCGCCGCT
CTGAAGATAGATCTGGCGAAGCTGTACATGAAGATGAAGCAGTACGACAAGGCGGAGGCGACTCTGGTGCAAGAACTTCA
AGACAAGCGAGGCGAATCCGACATCCTGAGCCTGGAAATGCGAGGGCAAGAGCTGCTATTGCTCGCTAAAGTGCGCGAGA
AGTCGGGCAACGTTAGGGGCGCGCTGGCGACATTGAAGGAGGCCAAGGAGAATCAACATAGATATATTCAGCGTCTTAGT
GTCTCGCCGGACATTGCGGATCAGAAGCACGCACTGGCGAACATCTGTCTGACGATGGCCGATTACGCATCGACCTTGCG
GAATTATGACGAAGCCATAATATATTATAAAGAAGCGTTAGCTCACAAGCCTACGGACGTAAACGCTCTGCTTTCTCTGG
CGAAGCTATATATGCAGATGAACAATTTAGACCGATGCGCGCAGAATTGTTCCATCCTGCTGAACGCTGATCCCAACAAC
GAGGCTGCATCCGTGATGATGGCGGATCTCGCGTTTCGCAAGGTGGACTTCGAGACCGCAGCGTTTCACTTCCGACAGCT
GCTGATACGTCAACCGACTTACTGGACTGCCCTAGCAAGATTGATAGAAGTGTCGCGCAGAACAGGTGCTATGGACGACC
TCGACGAATGGCTGCAGCGCGCGCAGGTCGCGATGGGCGCCGGCAACGTCGAGGCCGGTTTTTATTACTGCGCCGGATTG
CTGGATTGGCGGACTGGTAAATTGAACTCCGCTCTTCGCAACTTCAACTATGCGCGACGCGACCCAGAATGGGGCCAGCA
GGCGATCTACAACATGATCGAGATCTGCCTGGATCCCGACGACGACACTACTCTGTCGAACGAGGCATTCAACGACGAGG
ACGCCGAGTATCAAGACTCGAGGACGATGGCTCTGAGAACGGCCTACCGATTACTCCAGGAATTGAATCCCAAAGGCAGT
CCTCACGAGGAGCTGACGCACAAGCTGCTCAGCGATTTCTTCCTGCTGGCTACCAAGCAGAAATCGAATATCGAAAAGGC
TTTGCAAGACTGCACCGCGCTGGCCAGCCAAGAGACTTTGCGGGATCACGTAGGGCCTGCACTTGGCATGGCCACCGCTC
ACATCCTGCTGAAGCAAACGCCGCGCGCCCGCAATCACTTGAAACGCGTCAGCAAAAACATTTGGACGTTCGAGGACGCT
GAATATCTGGAACGCTGCTGGCTGCTACTGGCGGATATCTACGTGCAATCCAGCAAGTACGAACTGGCGAATGAGCTGCT
GAAGCGAGTGTTGCAGCACAACGCTACCTGCGTGCGAGCTCATGAATTATCAGGATACATCGCCGAGAAGGATCAGAATT
ACCGCGAGGCGGCGACGAGGTACGCCCACGCGTGGAAATGCGGCGGCAAGACGAAACTGTCGATCGGTTACAAGCTGGCC
TACTGCTGCCTGAAGGCGAAAGCTTACGCGGACGCCATCGAAGCGTGCAATGAAGTGGTGAACCAAAATACGGATTATCC
GAGAATCAGGAAGGACATTCTGGAAAAGTGTATCAATAATCTTCGCACGTGA
PEP:
>LH22635-PA
MEEAEYVALIEWYCRQRYYNGMLAQAKQARDAHPGSERLRLLLCLAYVLIGKSHEAVKENTSLLNQADFTLPALLVQSVA
LADGDVERSTVSQIENRIRDERRRASCVALCLATSVLILSRRADKAKEYVDRAYKLKPTNVNVLLVKGWLELNLRSGADI
AETGSFFDSVLKEESRNLSALLGSAEVKRRAGNHSEAVSILNSLVVRYPKLPLPLIEKTKCLLAAKDWEQVLEMVNRVLV
IESNNLDAIKASSVVAFCRDGNPGEGLPQLQLFLRNLSLAESRNVLLLIDNLRLFTGVAFQDHGILSELARAAEKMLQAT
SSGSAELMSELGDLYIALGNTKDAERWYKNAIRADQSSFAALMGLAHCQLLHGSADDLDQARQQIDIMMEIQPHSTNVRL
LLMSAKIAANEDNRKTLNYLDAAANLLLKNCEGLPYGYEYLSELRPDLCLEIAKQRLMYSLNKSPMSDELGRAMEKEPSV
HLLERLVEACPGSSAALLLLSRAKMQSGDYDGAFVLLRTLDAVEPSNAQAHLAMAQILAYQGKYQLASQSLEVGLSYNFK
IRDEPLYHLIIGMVQREAGDLDSCVKSCQTAMSLAGLTGNVSRKSDMSTSDRASLYLELITAYSKARRFAEALTLVDEAK
MNLAGTAELGRLTIGAAGVHLDMGELENAVGSLQSIHPGQPYYVQAHTRLAEINLNYRKDRQAFAKCFRMRTDNGDIRWL
FRELVEHCPGPRTYSMLGNAYISIQEPERAIEAYEQALSQNPIDKVEIANKMGKALVKAHQYAKAITYYKDIVKQDNCAA
LKIDLAKLYMKMKQYDKAEATLVQELQDKRGESDILSLEMRGQELLLLAKVREKSGNVRGALATLKEAKENQHRYIQRLS
VSPDIADQKHALANICLTMADYASTLRNYDEAIIYYKEALAHKPTDVNALLSLAKLYMQMNNLDRCAQNCSILLNADPNN
EAASVMMADLAFRKVDFETAAFHFRQLLIRQPTYWTALARLIEVSRRTGAMDDLDEWLQRAQVAMGAGNVEAGFYYCAGL
LDWRTGKLNSALRNFNYARRDPEWGQQAIYNMIEICLDPDDDTTLSNEAFNDEDAEYQDSRTMALRTAYRLLQELNPKGS
PHEELTHKLLSDFFLLATKQKSNIEKALQDCTALASQETLRDHVGPALGMATAHILLKQTPRARNHLKRVSKNIWTFEDA
EYLERCWLLLADIYVQSSKYELANELLKRVLQHNATCVRAHELSGYIAEKDQNYREAATRYAHAWKCGGKTKLSIGYKLA
YCCLKAKAYADAIEACNEVVNQNTDYPRIRKDILEKCINNLRT
Swiss-ProtTetratricopeptide repeat protein 21B
SUPERFAMILYSSF48452  TPR-like superfamily     
Gene3DG3DSA:1.25.40.10     
PfamPF13174  TPR_6; Tetratricopeptide repeat     
SMARTSM00028     
ProSiteProfilesPS50293  TPR_REGION; TPR repeat region circular profile.     
OrthologiGroup-00786    Tetratricopeptide repeat protein 21B      

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