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Gene detail [Fasta]

Species Linepithema humile
GeneLH19294
Positionscf7180001004964:1097498..1102356[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH19294
sequence mRNA: 
>LH19294-RA
ATGTGTGACAATATAAGTGGCAATCCATTTGCCGGATTGTTTTCAACAGATAATGATGCTGTCTCATTTTCTTCGCAGCA
TCATACGATCGATGATGAAAGTAGCAATACTAATTATGTGGAACAATCGTTAGACACTATTAAAGATAAATCTGAAAATG
TGACAGAATCCAGAATTTTAAAGGATAAAATTGATCAGCTTATAGCTCATGTGTTTGGATTAACATTATTTAGAGACAGC
AACAATACTGCACAGAGATGTCTGGTATTCATCGATGCTGATTCAATTGAACACGCTGTTTTCGAGCGTTTGATGCTGCA
AAATCCAAAACCTGAGTGTATGTACGACAATACATCTGTACAAGAGATCGATAATCACGTCGTTCAAACACATGTTATAA
CCTATCTTTATGAATGTTATTGTCGTTTAAAACATTATCAAACAAATGATAGTTTAGAAGATACTGTAAGAAATGCTTGC
CAAATTGTGCTACGAAATGCCCAAACGGCTTTACAAGAACCAAATTTATTCGAAGATCAAGAGGTTCATAGTCAATTTGT
TGATTTATTCATGGATGATGTTACACCAAAGTCAGAATTATCTTCATTCGTTAATGGCATAATAGAAGAATTATTTGCTG
CAAATAAAGCGAGCGATGTAGAGGATGTAATTGCGTGGTCCTTTGCTCAGGTTCTTGATATTATTCATAAAGAAATAGCT
CAGAGTAATCTTTTTACCTTTCGCCAGCAATGGTTTACTTTACTACATATATTTTCCACTATTGAGCCCTTGGCAAAGTT
GATGATTCTTCATAGCACACCAAAAAATAATCAAGGCTGCGCATACTCGGACACATTATTAGGTTCACTCTTCAGCATAA
GCTGCTTACCAAAAACGGCTAAAGATCCGTATGATCTTTTTGATAAACCTTTACGGCAAATTTTACAATTTGCTTTATAC
ACTATTGAAATATCACAGCCGAACACAGTCATGGAAGGTACTATATGGACAGCTATGAGTAGCTTAAGTGAAGCCCTGTA
TAAAACTTTCCATTCTTTACTGAAATGTTCGACAATGATTCGTCACTTGACTCTGCAATGGCTTAGCAATTGCCTCCATG
CCAATGCAAATAGGGGAAAACTTTGGAATTCTCATATGGATATGGGATTATTAGGTGTATTGTGTGTGTCGGATGGTTTT
ATGCTGAATGTGGGTAATGTCCTGCTACGCCTTTGTCAACCATTTTGTATAAAATTGGACGATACCAAAGTACCCAAGAT
AGATCCCACATATTGTAACGCTGAGGTGAAGAATGAAAGCGATAGTCTAGAACGTGGTATACATATGGTGGGATTGACTT
CAGAAACATGTTTGATACCGACTCCGGAAGGTGAGACTCGACCAGTAGCAGATTCATATGGATTCACAACGGAATGCTTT
TTTCTTACACATCGTGCGTTAGATCTTGGCTACAGAGTAATACTTGAGAAGTTTTTAAGGATAAATCAGGATTTGGCTAG
AATACAAAGAGCGTATAATGATGCTCGAACTGGAGGTAGTTCAGAGGTGTTAGAACTTATAACGCAACGAATGGAGACTG
AGATGACAAAGTACTTGACTCTTAAAGCGAGTCTCCTAGTGCCAGAGATGTTAGAACACTTGGCGAAATTTCACGCAATG
ACGGCGTTTTGGTTGGTACAAGTAAACTTACATGTTGTGACTGAAGAACAGAGCAAGCAAAGTTTCGCCCCAAAACAATA
CATACCTCTTACATTCCCATTATCAGAGGCTGTCCCGATTACACTAAGGTGCATTCCCGAGTTTGTAGTAGAGAACACTA
TTGGATTCTTGTGTTTCTTACGTCGCTTGAGTCCAAACACATTCGAGGAGCAGGGTCATAGCTTTTTAAATCCAATCTTG
ACGGAGATTATAGTTTTAATGGAGTCTCAACATCGTCTGTACAATCCACATTTGCGTGCGCGTTTAGCCGAGAGTCTGGA
AGCACTTTTGCCGACCGCGGATGAGAATGCGACTCTAGCAACACCCAACTTGGGAACATTCCATAGAGAACAGTTGTTTC
TCACTCATCCACACAGGCAGCAAATAATTGCCAATTTGCTGCATGTTTTTGTAAGTATCGAAATGACGGGGCAGAGTGTG
CAATTCGAACAAAAATTCAATTACCGTCGTCCGATGTACAGCGTTATGGATTATTTATGGAAACTTCCTGAACATCGTAA
CAATTTCATTGCTTTAGCTCAAGACGCAGAGAGCAACATGGAAGCAATTCAACCACCGCTGTTCCTACGCTTTATTAATC
TATTAATGAATGATGCTGTGTTTCTTTTGGATGAAGCTTTATCAAATATGACACAGTTGAGACAGATGCTTCAAGCTAGG
GAAAGTGGAGAATGGAATAAATTGCCACCAAATGAACGGGAACAGCAGGCAGGCTATCTTCAGCACATTGGTATGATTGC
TCGTTTTGATAATATTCTAGGCAGAAAAACTATACAGACGATAAAAATGTTAACAACTGAAATAAAATCGATCTTTTGCC
ATCCAACTATGGTGGATCGTATCGCTTCTATGCTCAATTATTTATTACTACAATTAGTGGGCCCAAATAAAAAAAATCTT
AAGGTGAACGATCAAAAAGAATACGCATTTAATCCAGCAAATTTGGTATTAAATATATGTGAGATCTATATTAATCTGAA
CAAAAGTGAAAGTTTTACACTAGCTGTGTCGCAAGATGGGCGTTCTTACAGCCCAGAACTTTTTAAACTTGCCGATAATG
TACTAGTTCGCATTGGTGGTGTGGGAATCCTGGGAGATTTGGATCAATTTGCAAAGAGCGTGGAAAAGATTGCAAATCAA
AAGCGAGAAGAAGATGAAATTTTGACGGGTATTCCCGACGATTTCCTGGACCCAATTATGTCAACAGTCATGACGGATCC
CGTAACTTTACCATCGTCCAAAATAACCATCGATCGTCAAACTATAGCAAGACATTTATTAAGTGATCAAACTGACCCTT
TTAATCGATCTCCACTTACTATGGACATGGTAAAACCAAACGTCGAACTTCAACAAAAGATACAAGAGTGGATTTCGCAG
AAAAAACAAGAGAAATCTTTAAGCATTCAGACTTAATCTATTGTCAATTATTATATCATGATGGGACAATGTTGAAACTT
ATTTTCGAAGTGAATATATT
PEP: 
>LH19294-PA
MCDNISGNPFAGLFSTDNDAVSFSSQHHTIDDESSNTNYVEQSLDTIKDKSENVTESRILKDKIDQLIAHVFGLTLFRDS
NNTAQRCLVFIDADSIEHAVFERLMLQNPKPECMYDNTSVQEIDNHVVQTHVITYLYECYCRLKHYQTNDSLEDTVRNAC
QIVLRNAQTALQEPNLFEDQEVHSQFVDLFMDDVTPKSELSSFVNGIIEELFAANKASDVEDVIAWSFAQVLDIIHKEIA
QSNLFTFRQQWFTLLHIFSTIEPLAKLMILHSTPKNNQGCAYSDTLLGSLFSISCLPKTAKDPYDLFDKPLRQILQFALY
TIEISQPNTVMEGTIWTAMSSLSEALYKTFHSLLKCSTMIRHLTLQWLSNCLHANANRGKLWNSHMDMGLLGVLCVSDGF
MLNVGNVLLRLCQPFCIKLDDTKVPKIDPTYCNAEVKNESDSLERGIHMVGLTSETCLIPTPEGETRPVADSYGFTTECF
FLTHRALDLGYRVILEKFLRINQDLARIQRAYNDARTGGSSEVLELITQRMETEMTKYLTLKASLLVPEMLEHLAKFHAM
TAFWLVQVNLHVVTEEQSKQSFAPKQYIPLTFPLSEAVPITLRCIPEFVVENTIGFLCFLRRLSPNTFEEQGHSFLNPIL
TEIIVLMESQHRLYNPHLRARLAESLEALLPTADENATLATPNLGTFHREQLFLTHPHRQQIIANLLHVFVSIEMTGQSV
QFEQKFNYRRPMYSVMDYLWKLPEHRNNFIALAQDAESNMEAIQPPLFLRFINLLMNDAVFLLDEALSNMTQLRQMLQAR
ESGEWNKLPPNEREQQAGYLQHIGMIARFDNILGRKTIQTIKMLTTEIKSIFCHPTMVDRIASMLNYLLLQLVGPNKKNL
KVNDQKEYAFNPANLVLNICEIYINLNKSESFTLAVSQDGRSYSPELFKLADNVLVRIGGVGILGDLDQFAKSVEKIANQ
KREEDEILTGIPDDFLDPIMSTVMTDPVTLPSSKITIDRQTIARHLLSDQTDPFNRSPLTMDMVKPNVELQQKIQEWISQ
KKQEKSLSIQT
Swiss-ProtUbiquitin conjugation factor E4 A
KEGG     K10596  UBE4A; ubiquitin conjugation factor E4 A [EC:6.3.2.19]     
SUPERFAMILYSSF57850  RING/U-box superfamily     
Gene3DG3DSA:3.30.40.10     
PfamPF10408  Ufd2P_core; Ubiquitin elongating factor core     
SMARTSM00504     
ProSiteProfilesPS51698  U_BOX; U-box domain profile.     
CoilsCoil
OrthologiGroup-00264    Ubiquitin conjugation factor E4 A      

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