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Gene detail [Fasta]

Species Linepithema humile
GeneLH19266
Positionscf7180001004964:1004509..1010204[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH19266
sequence mRNA: 
>LH19266-RA
ATGGCAGATCCCGGAGGATGGGCCCCGGCCCAGGAGAATGACTTTTCCAATTTTCAATCAAATGACAGTTTCAACTTGAA
TGAAGTCACTGGCATCGATGATCTCCTTACAAATTGTGAGAATGAGTTGTTGAAAACAGAACTTTTCAGCGATGAGGCCC
TACTCTCTGAATTGGATGAACCTATGCCTATGGATGGAGATTTCAATTTCTTAAATCTTAATAACACTGACGAATTTAAG
GATTTTAAGGATTTCAAAGATTCAACAATTCTTGAATCACCTAATACAAATGTTATGGTAACGCAACAAGCAGTGCCGGA
TAATAATCAGCCTGTTACTTATGTACAACAAGATGTCCCATCGGTACAACAAAATCGACCGCAGAGAATATCAGTGGCTT
CAACAACACCTACGGTGTTTAGTTCACAATACACAATTCCACAAAATGTAAATTTCAATGTTCAATCACCGAACGTTGTA
ACCTTAGCTCCAGTTGCCCAACAACGACAACTACTTCTGCCAGCCAAATTGATAAAATCAGAATCTCTTGTATATTCGAA
AGGCGCACAGTCCATTACGACAACTTCTGTTCCACATCAGATACATACTCTCGTGAATACTGCAAATGGGACGGTATTAA
CTACTGGGATTCCTGTAGTGTTGGATACCGATAAGGTACAAATTAATCGTTTGAACACGGGCACGCATGTGGGTGTACCA
AGAGTGAGAGAGGTGAAACGCAGCGCGCACAATGCTATCGAGCGGCGTTACAGGACGTCAATCAACGATAAAATAATCGA
ATTGAAAAACATTATAGTTGGAATCGACGCCAAATTTCTGCAGAATACTAATGCAAAATTGAAGGCTGAGAATTTGTCGC
TGAAGATGGCTGCTCAACGGCAAAATCTTCGCGAGATGTTGGTCTGCGGAGAACTGACGCCTCCACGTTCAGATTCGAGC
GAACCGTCCCTGTCACCACCACCGGCACCACTTTCACCACCGTCGCCGTCATCCGTGAAGGACGATTCGGACACACTGCA
GAGTTTGCATCCTGTGCCAACTTCGTCCAACGGCGGCATGAGGGATCACACTCGATTAACGCTTTGTGGATTCATGTTGT
TATTCTTGGCGTTCAACCCTCTTGGTATTCTCATCAACAATGTCGGGAGATTCAATTATGATTATTTAAATACAAAGTTG
GACGGACGGACGATACTCAATTACCAAGGTAATTGTCAAGAAATTTTCCATGATTTCGATAAATCTGTTATAAATCGCTG
TGTTTTTTTGTTCCCGGATTTAGATCAATCGGAATCGGACAAGCAGCTGTGGAGCAACATTATTCTTTGGTGTACCAATC
TGATACTCTTGGCAGGCGGTCTTTGTCGATTGTTGCTGTATGGCGATCCCGTGTTACCCACCGACAGCAAGGTCTTCCTC
GAGTTACGTCGCTGGAGACGTCAAGCCGAATTCAACATGTCTAAACACGAGTATAATCAGGCGTACCGAGATTTGCACCA
GTGCCTGCAGTACTTTGGCCGATCCTTTCCGTTGTCACGTACGGAGATCTATCTTGCCACCACGTGGCAGATAGTGCGAC
AGGTTCTTCACAAATTATGGCTGGGAAGATGGATCATGCAGATCAGCAAGTGGCTGTCGGAGAAGTCGGAGCGACAGCAG
GCAGAGATGTCCGCCGTTGAGATAGCCATCGTCTACCAGCACATGCTTTGCTTGCGCTTGTCCGAGGGAACGAAGGACTC
CACGTTGTATCTCGCTCTCTGCGCCCTGAATTACGCGGAGGCCGCTGGCGAAAGTATACCGAAGCCGCTTTTGGCGGAGA
TATATGTGAATGCCGCGCTGTGTCTGAAGCAATCTTTCTTCCCGTACATACACAAATATTATCTGGGCAAAGCGCGTGTC
CTGTTGTCCTCTTGCGCCGTTCCTGCGAAATTGAAGTGGATCATGACCGATGAGGGCGCGAGATTCTTGGCGTTGCAGAA
GTGGCAATATAAGAAGCAGCCTGACAGCGAGTTCACTTCGCAGAACAGTAGAGCGGACCCGCTGTCGTACGCGGCTCGCG
CATACAGGGATCATCTAATTGAGCAGTGCCTGCGCTTGCTGACCGGCACCGTCGGAGAGTGTCACGCGTCCTCGGTCCTC
GAGTTGGGACGAATCATCATGGCCTCGGCGGAAGTGGACGCCTGTTTTGCGTGCACCGATCAAATCAACATAGCGACGTG
CGAGGATGAGATTGGATTATGGTGGGGCGCGGTGATTTGTGCTGCCGCAAGTTGGAGATTAGGCGAGGAAGACCCAAAGG
CGTGGAGCATCGTTGAAAGCAAATTCCCGTATGAGAGAAATTTCCAAATCGGCGATAATAATAGCAGCAGCAGTCCGTTA
CCGCACGCTGTGCTCAATGTTCTGCAAGCTGCAAAGCATTCTACAAAGTTGATGTCCATGCGTTTCATCGATCAGGCGGG
ATTGCTGCTTGAGCAATCCATGGTGTACTATCATTGCAAGGAGCAATCGTCACAGCAAATCTTGCTTACACAGTTGTGGG
TCTGTGACTGGCTTCTTGAGTTACGCACGACACTGTGGCAAGACCAGGATGTAGAATCAGAAAGATCTGTCGCAAGTATG
TCCCTTGCAGGATTCCAGCGCGATTTGGCATGCTTGAGACAATTGTGTCAACATATCCCATCCGTATTGGCGCGCGTCTT
CTTATACGAGGCTACAGCGCGCATTATGGCTGGTGCGACGCCGGTGAAGACTCAGATTTTGTTGGATCGAAGTCTGCATC
ACAGAAATTCACGATCCTCCATCATATGTGGAAAGGATCGGTCGCAAAAAGAGCAGAATAATAGCGAGAGAGAGCACGCA
GTCGCGTTATGTCTCGCGTGCAGGCATTTGCCTACGTTGTTGTTAGCCTCGCCGGGAGAACGCGCCGGTATGCTTGCGGA
GGCCGCTAAGACATTGGAACGGATAGGGGACAGAAAACGTCTTCAGGAATGTTATAAACTAATGCGGCAACTAGGCTCCG
CAATCACTAGGAAAAAGCTATTTAGCAACAGTAATTGA
PEP: 
>LH19266-PA
MADPGGWAPAQENDFSNFQSNDSFNLNEVTGIDDLLTNCENELLKTELFSDEALLSELDEPMPMDGDFNFLNLNNTDEFK
DFKDFKDSTILESPNTNVMVTQQAVPDNNQPVTYVQQDVPSVQQNRPQRISVASTTPTVFSSQYTIPQNVNFNVQSPNVV
TLAPVAQQRQLLLPAKLIKSESLVYSKGAQSITTTSVPHQIHTLVNTANGTVLTTGIPVVLDTDKVQINRLNTGTHVGVP
RVREVKRSAHNAIERRYRTSINDKIIELKNIIVGIDAKFLQNTNAKLKAENLSLKMAAQRQNLREMLVCGELTPPRSDSS
EPSLSPPPAPLSPPSPSSVKDDSDTLQSLHPVPTSSNGGMRDHTRLTLCGFMLLFLAFNPLGILINNVGRFNYDYLNTKL
DGRTILNYQGNCQEIFHDFDKSVINRCVFLFPDLDQSESDKQLWSNIILWCTNLILLAGGLCRLLLYGDPVLPTDSKVFL
ELRRWRRQAEFNMSKHEYNQAYRDLHQCLQYFGRSFPLSRTEIYLATTWQIVRQVLHKLWLGRWIMQISKWLSEKSERQQ
AEMSAVEIAIVYQHMLCLRLSEGTKDSTLYLALCALNYAEAAGESIPKPLLAEIYVNAALCLKQSFFPYIHKYYLGKARV
LLSSCAVPAKLKWIMTDEGARFLALQKWQYKKQPDSEFTSQNSRADPLSYAARAYRDHLIEQCLRLLTGTVGECHASSVL
ELGRIIMASAEVDACFACTDQINIATCEDEIGLWWGAVICAAASWRLGEEDPKAWSIVESKFPYERNFQIGDNNSSSSPL
PHAVLNVLQAAKHSTKLMSMRFIDQAGLLLEQSMVYYHCKEQSSQQILLTQLWVCDWLLELRTTLWQDQDVESERSVASM
SLAGFQRDLACLRQLCQHIPSVLARVFLYEATARIMAGATPVKTQILLDRSLHHRNSRSSIICGKDRSQKEQNNSEREHA
VALCLACRHLPTLLLASPGERAGMLAEAAKTLERIGDRKRLQECYKLMRQLGSAITRKKLFSNSN
Swiss-ProtSterol regulatory element-binding protein 2
KEGG     K07197  SREBP1, SREBF1; sterol regulatory element-binding transcription factor 1     
SUPERFAMILYSSF47459  HLH, helix-loop-helix DNA-binding domain superfamily     
Gene3DG3DSA:4.10.280.10     
PfamPF00010  HLH; Helix-loop-helix DNA-binding domain     
CoilsCoil
OrthologiGroup-00699    Sterol regulatory element-binding protein     

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