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Gene detail [Fasta]

Species Linepithema humile
GeneLH19238
Positionscf7180001004964:684951..699728[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH19238
sequence mRNA:
>LH19238-RA
ATGCGGCTCTACGGAATCCTCGGCAATTGTCCCGAGGTGCAGCCACCGCAATGGGGAACGGTGAGAAAGCAGATTCTTGA
AGATGGTACTCTGCAGATTATGTACTCATGCGAACCAAGCCGTAAAGTCAAAGGTCGCAGGTTAGCGATCTGCATCGGCG
ACCGTTGGAATCATCCTGTTCCGAAATGCGTGCCTCGCGTCAATTATCCACATGAAAGGGAGCCTAACTCCTCGTGCCTG
GCGGCTAAAACCGCCTCGACGCACGTGTTCAATAGACTGACGGACAAATCCGTTTACCACGAGACATCGAGCTGTCGAAT
AAAGGGACTCGTGGTACCAAACTCGCTCTTAATGCCTTTTATGAACGATATGTCAAAAAGTTGCGAAAGTTTTGAAGAAC
AATTTACCCAAGGCGCCCATTCCCATGATTTGTGGAAACACGACTTCACCGTGGGATTCAATTTTCACCGATGCTCAAGT
TATCGGCATATCTTAGGCCGAGAGTTGGCACCGTTCCCGACTTCGAATATATGTCTCTTATTCCTCGCGCTACCCTTTGA
AGCTTTAGGCAAATTGGGATCGCTGATCGCGAACGGGTGTTCTCTCCTTGCCGTTCAGAACGTTGACCAGCAACGGCCGG
GATTCCGGGACGGGGAAAATTCGCGGAGTGGCGTTTCGGTGCTTCAGGAACGCGCCTCGTTCCATCGCGCGTGCTATCGG
CGGCACGAAATTCGCCGACATGGCATAGCTTGCATTCGCCTCGATGGAGATAAGCCGCCAAGTCATACACCACATGGACG
TTGTACGTCCCTTCCTCCCTTTGGATTTAGCTTTGAAACTGACACGTTACGTTGTGTTCACTGTGCAGAGTTATTTCGAC
CAGATCGTATTGATCTTTATCTTGGCGATCAACCAATCATTCCGTACGAGGAGAAATTGGCGGTGGAGAGGATAGACAAG
TTAAAAAACCACAGAAAAACTAAGGAGAGCAAGAAGAAGAAAAAGAAGAGGAGAAAGTTGGCGCGGGGAAAATCTACCTT
AATCTTGTCAAAACTACTGACAACAAGATTAAATGAAACTGTGGTGTCCGAGCTGGATATCAGCTGCTTCGCGAAGGCTC
TCGGAAAGGGACTCATTAAGGCCCCTTTAATCGAACACACTTCTCCTGCCAAATACGCTAGAAGGAAGAATATACTGCCA
CCCTACAATCGATATCTCGTTGCGATTTACGAGTGCGAGGATAGTTACGCTTTCGTCGATTCGACGACAGACAGGCTTTT
CTGCAGCAATTACACTTGGCTTGGGCCACGTCCGAAATGCGTGAAAGAAAATCAACCGCCGATCGATAAGGTGAAACGTT
GCGACCAGGATACACGTGAATGCGAGCAAGTGTGCGAGGATATACCAACCGGCATAAAGTGTTCCTGCTTCGATGGATTT
CGGGCTAAAGGATCTTCTTGTATAGATATTGACGAGTGTGTCGAAGGCACAGCGAAATGCACCGATATTTGCGCCAATAA
AGTCGGCTCTTATTCTTGCGAATGTCATCATGGTTTTCAGTTGGCAACTGACGGTCATTCTTGTGAAGATATTAATGAAT
GCGAAGTAACGCCGAAAGTTTGCGAGGAGAACACTGAGTGCGAGAATACAGTGGGGTCTTACAAGTGCATTAGTAAAATG
CATCCAGAAACAAAGATCTTTCGAGAAAAAGATTACGATAGTGAAGATGATAACGAGGATGACGACGACGTCGACGAATG
CGCAGCCGGTGTCTGCAAGGGCAACAAATGCACCAACGTGCCAGGCGGTTATCGTTGCGAGTGCGAGGCGGGATATCGAT
TCCACGGTGATACCTGTGTAGACGTCGATGAATGCACCGAGAAGGCGCCTTGCAGCGAGCGGTGCGTCAACACACCCGGT
TCATATTATTGCACGTGCCTTCCCGGCTTTCGACTGCAAGGCGACGAATGCGTAGGCAAGTTGCAACGCGCACTTTGCTT
CACACATATCGATGAGTGCGAACAGCATCGCGACAGATGCGATCAAGAGTGCATCAATACTGTTGGATCTTTCACTTGCG
CCTGTCATGCCGGATACGCGTTAATTTCAAGAGAGCAGTGTCAAGACGTGAATGAGTGTTTAAGCCGAAACGGCGGTTGC
GCTGGCGAGTGCATTAACACCGCCGGAAGTTACTACTGCGCTTGTAGCGAGGATTTAGTGTTGGCACCCGACGAGAGAAC
CTGCATCTCACCGACGTCGAGATGTCGCGCCATGGAACCGCCTTTACACGGAGAGATCAGATGTCCGGGTCATCCTTCCG
GCGCATCCGTCTACCCGCAGGGTGCCAAGTGTCACGTACGATGTCGCAGAGGATTTCGACTGGAAGGAGCACACACGAGA
CATTGTGTTAGCGGAGGCCGATGGAACGGCAGAGAGCCTATCTGTCTGCGCGAAGTTGTGACAGACTCCCTTTACAATCC
AAGTAACTCGTTCCTCGCTTCTATGGCAACAGGGAAAAACGCTGCAGGCGCTTGCGGCGGAGAATCGGACACGCCACGGC
CGTTCGTGAGCTGCCCCCAGGACATGGACGTCGAACTACCGGCTAGGCAGAACACGATACGTGTAACTTTCCCACAACCG
AAGTCCAACATGAATTGGTGGAGATACGTACAAGCCTCACCCCCATGGGCAAAGCAGTTGCAAGCGGATCTGCCGGCGGG
TACGACGATCGTTACCTTCACGGCATGGTCGCCGGTCTCTAATTACACCAGCACCTGTAGGATCGTGATAAGAGTACGCG
GACAATCGATCGGGATGGGAATCGGTTGGTACTCGAATCGGCTCGATGCGGTAAACTTTAGTTTCCACGGCAAAGTGCAC
TCCATCCCGTCTCCGTCCCGCTTAATTACTCATTCGGAAAGTTCGTGA
PEP:
>LH19238-PA
MRLYGILGNCPEVQPPQWGTVRKQILEDGTLQIMYSCEPSRKVKGRRLAICIGDRWNHPVPKCVPRVNYPHEREPNSSCL
AAKTASTHVFNRLTDKSVYHETSSCRIKGLVVPNSLLMPFMNDMSKSCESFEEQFTQGAHSHDLWKHDFTVGFNFHRCSS
YRHILGRELAPFPTSNICLLFLALPFEALGKLGSLIANGCSLLAVQNVDQQRPGFRDGENSRSGVSVLQERASFHRACYR
RHEIRRHGIACIRLDGDKPPSHTPHGRCTSLPPFGFSFETDTLRCVHCAELFRPDRIDLYLGDQPIIPYEEKLAVERIDK
LKNHRKTKESKKKKKKRRKLARGKSTLILSKLLTTRLNETVVSELDISCFAKALGKGLIKAPLIEHTSPAKYARRKNILP
PYNRYLVAIYECEDSYAFVDSTTDRLFCSNYTWLGPRPKCVKENQPPIDKVKRCDQDTRECEQVCEDIPTGIKCSCFDGF
RAKGSSCIDIDECVEGTAKCTDICANKVGSYSCECHHGFQLATDGHSCEDINECEVTPKVCEENTECENTVGSYKCISKM
HPETKIFREKDYDSEDDNEDDDDVDECAAGVCKGNKCTNVPGGYRCECEAGYRFHGDTCVDVDECTEKAPCSERCVNTPG
SYYCTCLPGFRLQGDECVGKLQRALCFTHIDECEQHRDRCDQECINTVGSFTCACHAGYALISREQCQDVNECLSRNGGC
AGECINTAGSYYCACSEDLVLAPDERTCISPTSRCRAMEPPLHGEIRCPGHPSGASVYPQGAKCHVRCRRGFRLEGAHTR
HCVSGGRWNGREPICLREVVTDSLYNPSNSFLASMATGKNAAGACGGESDTPRPFVSCPQDMDVELPARQNTIRVTFPQP
KSNMNWWRYVQASPPWAKQLQADLPAGTTIVTFTAWSPVSNYTSTCRIVIRVRGQSIGMGIGWYSNRLDAVNFSFHGKVH
SIPSPSRLITHSESS
Swiss-ProtLatent-transforming growth factor beta-binding protein 4
SUPERFAMILYSSF57535  Complement control module/SCR domain superfamily     
Gene3DG3DSA:2.10.25.10     
PfamPF00084  Sushi; Sushi repeat (SCR repeat)     
SMARTSM00181     
ProSiteProfilesPS50825  HYR; HYR domain profile.     
CoilsCoil
ProSitePatternsPS00010  ASX_HYDROXYL; Aspartic acid and asparagine hydroxylation site.     

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