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Gene detail [Fasta]

Species Linepithema humile
GeneLH23536
Positionscf7180001005057:498258..502658[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH23536
sequence mRNA: 
>LH23536-RA
ATGCCACGGGATATAAGATCTTATTTTACGCCGGTTGCAACCTCTCAGAAGAAGAAAAGTGAGCCTGTCGTTTCGAAGCC
TCAAAAAAGACGTGTGATCTTGTCGGATGATGAGGATGAAGAGGAATCAAAGTCATCTGCTCGAAAACGCTCGAAGGTTG
TGCGAAAAACAAAGAAGGTTTCTGCCCTCTCTGACTCAGAAGATGAGGTGATTATATTAGACAATAAGAAAGAGTCTAAA
GCAAGTAAGAAAAATGTGAATGAAAAGCCACGCAAAGAAATTGCTCCTGGTGAACTGTTTGGCAAGAAACCAATAACGAG
AGTAGAAGAGACAAAAGTCAGCCGGAAATTACATAAAGTGGAATCTGAATTTCATGATGATGATGCTTTTGATGCTGTAC
TTGAACAATTGGATTCTCAGAGTACAGCAACGCAGAACACAATAAAAGATAAAAATGACATTAAAAATACAGATATTCCC
AAGCATTCTAAAAAAGATGCAGATTCTAATAAGAACAAAAAAGATGATACTGATTCAAAATATTTTCATAATGATACAAA
TAAAAAGAATAAAATAGAAACTAAGGAAGTAAAAAAATCTCCCAGGAAGAATAACCACAATGCAACAAAAATTACATCTC
CTACAAAACAGAAATTGCAAAAGAAGAAAAACAATAGTTTTAGTTCGAATGAAGACTTAAGTACAAATGACGAATACAGT
AATAACAAATCAAATAGCAAAAAGATAAATTTGAAGGATGTCTCAACATCAAATAAAGATGAAGATACAAAAGAACAATC
ACAAGACAAAAAGAAAGCCAAAACAGTGGATTTATTTGAAGAGAGGATACAAAAGAAGAAAGAGCGCGTTGCAATGTATG
AAAAATATCTTCAGAGAGGTGGCGCCAGAAATCCTGGCTCTAAAGAAATTCCATCAGGTGCTAAAAATTGTTTAGCCGGC
GTGACTTTCTTGATTACCGGTGTTTTGGATTCCTTGGAAAGAGAAGAAGCTGAAGATTTGATTCAACAATATGGTGGTCG
TACTGTGAATGCTGTATCGGGCAAAGTTAATTATATTATAGTGGGAGATGAGGCTGGCCCGAGCAAATTGATAAAGGCCA
GTAGTTTAGGCATCAAGCAGATATCTGAAGACGATCTCCTACAAATGATTCGCACGAGACCGGAAGGTAGATCTGAAGAT
ATCAAGCCAACTAAAACAAGAGCAAAATCGAAAACATCGAATAAATCTGAAAGCGATAAATCGCCATCGCCGAAAAAAGC
AAAAACGCCATCGCCGAAGAAAGCAGAAACGCCATCGCCGAAGAAAGCAGAAACGCCATCACGTTCACCAGTAAAGGTGA
AAATGTCGTCGCCGATGAAACAAGCTTCAGACACAAGCAGTACGAGTGAATCGCAGGAGATAAGTGTCGGATCGCAACCG
CTAGTTGAAAAATACAGACCCAAGACCTTGAAGCAGATTGTCGGTCAGCAAGGAGACAAGAGTTGCGCGCATAACTTGTA
CGTGTGGTTGCGCGATTGGCATAAAAATCGCCAGGATCCAAAAGTCAAAAACGGCACCAACAAGCAAACCCATGGACAAA
GTTTTAAAGCTGCCTTGCTGTCCGGCCCGCCTGGCGTTGGCAAAACCACAACTGCGCAGGTTGTTTGCAAAGAATTGGGA
TACGATCTTGTGGAGTTCAATGCTTCCGACACCAGGAACAAGACGCTTCTGAAAGAAGAAGTCTCGGGATTGCTATCCAA
CACCACGATGAAGGACTATCTCACGGGTGCTAAACAAAAGATTACGAGTAAGCACGTGCTGTTGATGGACGAAGTCGACG
GCATGGCCGGGAACGAGGATCGCGGCGGCTTACAGGAGCTAGTCGGTTTGATCAAATGCACGGAAGTGCCTGTTATCTGC
ATATGCAACGACCGATACAACGCGAAGGTGAAGACCATTTCGATTCACAGCTACGATCTGAAATTCTCGAAGCTCAGGGT
GGAGCAGATCAGGAGTTCCATGTTGTCGCTGTGCTACAAAGAGAACATCAAGATCGCAAAGGAGGACCTCGACCGCTTGA
TCGAATCGACGAATCACGATATCCGACAAGTGATAAATCATCTCGAGTTCCTCAGCGGTCAAAAGGCTCGGGTCGAAGCG
ACCGAGAGGAAACACTCGAACAAGGACTTCAAGCTGGGTCCGTTCGACGTCGCCAAAATGGTATTCAGCGCCGAGCAACA
GAAGAACATGAGTCTGAACGATAAGATCGGTTTATATTTCCACGACTACAATATAGCGCCTCTTTTCGTGCAAGAAAATT
ACCTGGCGGTCAGATTGTCCCAGGTGTCGCCGCAGCAGAGGCTGGACAAGATTGCCCGCGCGGCCGACAGCATATCCCAA
GCAGACCTCATCGAGAAGATGATGAGAAGCAATATGATGTGGAGTCTGCTTCCAATGCATGCTTATTTCTCCTTCGTCGT
GCCTGGTAGCGAAATGTCGGGAAGCCTCGATGCGATGGTGCGATTTCCGAGCTGGTTCGGGCGAAATTCCAAGGCAATGA
GATTTAATAGTACTTTGGCCGTTAAAGAATGTACCACTTCTAGATTAATGCAAGAGTTAACGACGCATACGCGATTGGTT
ACGGGCGCGAACAAAGACGCCCTGAATATGGATTACCTGGTTCACATTCGAAACGCCGTCACAAAGCCTCTGATAGACAA
CGGCGCGGACGGTATAGAAGCTGCGATAAGCGTCATGGGAAAGTATCATTTAACGAGGGAGGACTTGGATTCGATAATCG
AAATCTCTCTCTGGCCAGGAGTTCGCGATCCTACAAGCAGCCTTGATAGTAAAGTGAAAGCAGCATTCACGCGCGCGTAT
CAGAAAAATCCGCCTATGTTGCCGTACGCGATTAATAGTAATGCGACGGCAAAGAAAAGGTCTGCGCAGGACGACAATTT
CGTGGAAGAGGAAGATGATGAAGAGGAGGACGACAACATTGATTCCGACAAGATGATCAAGGCGAAGAAACCTACCAGCA
AAGCTGCTGCCTCAACGAAGGCAAGCGGCGAACCAGCTAAAAAGCGCGCAAAAGGACGCGGTAAAGCGAAGTAG
PEP: 
>LH23536-PA
MPRDIRSYFTPVATSQKKKSEPVVSKPQKRRVILSDDEDEEESKSSARKRSKVVRKTKKVSALSDSEDEVIILDNKKESK
ASKKNVNEKPRKEIAPGELFGKKPITRVEETKVSRKLHKVESEFHDDDAFDAVLEQLDSQSTATQNTIKDKNDIKNTDIP
KHSKKDADSNKNKKDDTDSKYFHNDTNKKNKIETKEVKKSPRKNNHNATKITSPTKQKLQKKKNNSFSSNEDLSTNDEYS
NNKSNSKKINLKDVSTSNKDEDTKEQSQDKKKAKTVDLFEERIQKKKERVAMYEKYLQRGGARNPGSKEIPSGAKNCLAG
VTFLITGVLDSLEREEAEDLIQQYGGRTVNAVSGKVNYIIVGDEAGPSKLIKASSLGIKQISEDDLLQMIRTRPEGRSED
IKPTKTRAKSKTSNKSESDKSPSPKKAKTPSPKKAETPSPKKAETPSRSPVKVKMSSPMKQASDTSSTSESQEISVGSQP
LVEKYRPKTLKQIVGQQGDKSCAHNLYVWLRDWHKNRQDPKVKNGTNKQTHGQSFKAALLSGPPGVGKTTTAQVVCKELG
YDLVEFNASDTRNKTLLKEEVSGLLSNTTMKDYLTGAKQKITSKHVLLMDEVDGMAGNEDRGGLQELVGLIKCTEVPVIC
ICNDRYNAKVKTISIHSYDLKFSKLRVEQIRSSMLSLCYKENIKIAKEDLDRLIESTNHDIRQVINHLEFLSGQKARVEA
TERKHSNKDFKLGPFDVAKMVFSAEQQKNMSLNDKIGLYFHDYNIAPLFVQENYLAVRLSQVSPQQRLDKIARAADSISQ
ADLIEKMMRSNMMWSLLPMHAYFSFVVPGSEMSGSLDAMVRFPSWFGRNSKAMRFNSTLAVKECTTSRLMQELTTHTRLV
TGANKDALNMDYLVHIRNAVTKPLIDNGADGIEAAISVMGKYHLTREDLDSIIEISLWPGVRDPTSSLDSKVKAAFTRAY
QKNPPMLPYAINSNATAKKRSAQDDNFVEEEDDEEEDDNIDSDKMIKAKKPTSKAAASTKASGEPAKKRAKGRGKAK
Swiss-ProtReplication factor C subunit 1
KEGG     K10754  RFC1; replication factor C subunit 1     
SUPERFAMILYSSF48019  post-AAA+ oligomerization domain-like superfamily     
Gene3DG3DSA:1.20.272.10     
PfamPF00533  BRCT; BRCA1 C Terminus (BRCT) domain     
SMARTSM00292     
ProSiteProfilesPS50172  BRCT; BRCT domain profile.     
PIRSFPIRSF036578     
OrthologiGroup-00096    Replication factor C subunit     

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