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Gene detail [Fasta]

Species Linepithema humile
GeneLH23513
Positionscf7180001005057:457811..461634[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH23513
sequence mRNA:
>LH23513-RA
ATGGGCTTGACCAAACAGTATCTCAGATATGTACCTGCAGGTAATGCAAACATAATTGCAAGTCCTCGGTGCAATGTTGT
CTTTGTAAAATTGGAAGGCCAAGAAGGTAGATTTGTAGCTGCTGCTGCGTGTGAACATGTATACATTTGGGATCTACGGC
TTGGAGAAAAGGCACAAGTATTGTCCGGAGAGAAAGCATGTGTAACACATTTGGCTGCATCACCGAACAAAAGACATATT
GCAGTTGGCTACACAGATGGCACAGTGAAAACTTTTGATTTAAGCTCTGGTGAAAACGTCAGCATATTTGTGGGGCACAA
ATCTGAAATAACAGCATTAGCGTACGATGCTTTAGGACATAGACTAGCCACTGGCTCTAAAGATACAGATATCATTGTCT
GGGATGTTGTGGCAGAAACTGGAATATGTCGGTTAACTGGACACAAAGGTGTTATAACTAAATTAACTTTTATGAAGGAG
CATAACATCATTATTAGTGCTAGCAAAGATACATTTGTAAAGTTTTGGGATCTGGACACAGAACATAATTTCAAAACCTT
AATTGGACATAGATCAGAGGTTTGGAGTCTCGTCTTAGTGAACGACGATCGATACTTGATAACAGGATGTAATGATAAAG
AATTGCGTGTCTGGAAAATAACGTTTCTTGATAACAAGAGTATTGAGTTTGATACAGGTGTAAGCACTTTAAATCTCAAT
GAAGAGGACGAAGAGAATGAAGAAAGTATAGACACAGATATGAAATATCCCATGAAATGTGAAAAAGTTGGGAGTATATT
ACGCGCTGGGAACGGCCGTGTTATCTCGTTAGAAGCTGACTCCACATGCAAAGTTTTTGGATGCCACGGAGTGGGAAATT
CTATAGAATTATTTTATCTACTACCTGAAGAAACAGTAAAGACTAGATATTCAAAAAGAATGAAGAAAGAACGACAAAAA
GCACAAAAGCAAGGAAGTGATGCAGAAACGAATCCATCGACTGCACCATCTCTAAGGGATGAGATAAAACGTTTACCTGT
CGTGCAAGTTTCCGGTAAAGTGAAAGGGCTTGATTTAATTATGGGCAAAGAAAATGAACTCCGGTTATGCGTTGGAGTTA
ATAACAATTCGATCGAATTGCATTCCTTGTACACGGAAGAGAAGGATCCGGAAGTAAAATGTTTACGTTCAATAGCGGCA
CATGGACATCGCTCAGATGTCCGAGCTGTTTGTTTTAGTTCTGACAATTTAGCGTTCGCTACTGTGAGCGGAGATTCTGT
TAAATTATGGAATAGGCCAACATTAGCGTGTTTACGCACAGTGCATTGCGGTTACGCCTTGACCATAACATTCGTACCGG
GAGATAGGCATCTGATTGTTGGTTTGAAGGACGGTAAGATGCTTATTATCGACATTGCATCCGGCGATATTTTGGAAGAG
GTGCCTGCGCATTCCAAAGAGCTTTGGAGCGTGACGTTGTTTCCGGATAAGAAAGGAGTTGCCAGTGGCGGCGGTGACCA
AACAGTGAAATTTTGGAACTTTGAACTAATTCAAGATGAAGACAGTCAAATTAAAGCGAAGGTCCTTTCTGTCTTACACA
CAAGAACGCTTAAGCTTGAAGAAAGCGTACTGTGTGTAAGAATAAGTCCAAACAGCAGATTTGTTGCCGTTTCTCTACTG
GATTCTACCATTAAAATCTTCTTTTTGGATTCATTCAAGTTTTTCGTATCACTTTATGGACACAAGCTACCAGTGTTATG
TATGGATATATCCAGCGACTCCGCGCTCATAGCAACTGGTTCTGCCGATCGCAATATTAAAATCTGGGGCCTTGACTTTG
GCGATTGCCACAAATCTATGTTCGCGCACGACGACTCTGTCACAGGTCTCTCGTTTGTGCCTGATACTCATTATTTCTTT
TCTTCTGGAAAAGACGGCAAAATTAAACAGTGGGACGCCGATATATTTCAAAAGATCGTCACATTACAAGGTCACGCTGG
AGAAAGTTGGAATTGTTGCGTTTCGCCAAATGGAGTTTTTGTCGCATCTTGCGGCTCCGATAGGGTAATTAGATTATACG
AGAAGACTAATGAACCTTTAGTATTACAAGACGAAGCGGAAGAAGAAAGGGAACAGCAGGAGAACGAATTAGTCACTGGG
GAAACCACAGCGGTGTTAGGGCAGAAGCAACAAGCATTACCTTCCAGAAAGACTGTCAGCAGTGAAAGAGCTGCCGAATT
AATATTAGAATGTTTGGAAGTGTCTAAACAATATGACGATGAATTGAGTAAAGCTGTTTCTGACGAGAAGCCACCCCTTC
CTCTCTTGATGCAAGCTTATAATTGTGCAAGCACGGAAGACTTCTTATTGGAAACTTTTAAACGAGTTAGGGCAAGTGAA
ATGGAAGAAACATTGCTGTTATTGCCATTTTCAGCAGCCTGTGATATTCTGCAGAAACTTCCTACTCTGTTGAAAAGGGA
TTACCATGCCGAATTATTAGCCAGATTAGCTTTGTGCTTAATACAGGCACACCATGGCCCAATAGTGGCAAATCAAAATC
TTTTGCCCACATTGGAGATTGTAAAGAAGCTTGCTGATACTATTGGTTTTAATTTGCATGGTATGATGTACATCCAACGC
ATTCTCGAAGAACAAGAAGGAATCAAATTCTTCAGAGATGCCAGTAAGAATACCGAAAAGAAAAAGAAAATCAGGAGAAA
CAAGGAGAAAGCTATAAAGAGAGCAATCATGAACTTATAA
PEP:
>LH23513-PA
MGLTKQYLRYVPAGNANIIASPRCNVVFVKLEGQEGRFVAAAACEHVYIWDLRLGEKAQVLSGEKACVTHLAASPNKRHI
AVGYTDGTVKTFDLSSGENVSIFVGHKSEITALAYDALGHRLATGSKDTDIIVWDVVAETGICRLTGHKGVITKLTFMKE
HNIIISASKDTFVKFWDLDTEHNFKTLIGHRSEVWSLVLVNDDRYLITGCNDKELRVWKITFLDNKSIEFDTGVSTLNLN
EEDEENEESIDTDMKYPMKCEKVGSILRAGNGRVISLEADSTCKVFGCHGVGNSIELFYLLPEETVKTRYSKRMKKERQK
AQKQGSDAETNPSTAPSLRDEIKRLPVVQVSGKVKGLDLIMGKENELRLCVGVNNNSIELHSLYTEEKDPEVKCLRSIAA
HGHRSDVRAVCFSSDNLAFATVSGDSVKLWNRPTLACLRTVHCGYALTITFVPGDRHLIVGLKDGKMLIIDIASGDILEE
VPAHSKELWSVTLFPDKKGVASGGGDQTVKFWNFELIQDEDSQIKAKVLSVLHTRTLKLEESVLCVRISPNSRFVAVSLL
DSTIKIFFLDSFKFFVSLYGHKLPVLCMDISSDSALIATGSADRNIKIWGLDFGDCHKSMFAHDDSVTGLSFVPDTHYFF
SSGKDGKIKQWDADIFQKIVTLQGHAGESWNCCVSPNGVFVASCGSDRVIRLYEKTNEPLVLQDEAEEEREQQENELVTG
ETTAVLGQKQQALPSRKTVSSERAAELILECLEVSKQYDDELSKAVSDEKPPLPLLMQAYNCASTEDFLLETFKRVRASE
MEETLLLLPFSAACDILQKLPTLLKRDYHAELLARLALCLIQAHHGPIVANQNLLPTLEIVKKLADTIGFNLHGMMYIQR
ILEEQEGIKFFRDASKNTEKKKKIRRNKEKAIKRAIMNL
Swiss-ProtWD repeat-containing protein 3
KEGG     K14556  DIP2, UTP12, WDR3; U3 small nucleolar RNA-associated protein 12     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF04003  Utp12; Dip2/Utp12 Family     
SMARTSM00320     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
PRINTSPR00320     
CoilsCoil
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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