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Gene detail [Fasta]

Species Linepithema humile
GeneLH17445
Positionscf7180001004928:90267..96078[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17445
sequence mRNA:
>LH17445-RA
ATGGGCGACATACGGGCTGGTTTGGATGACTTGAAGCTTGACGGTGCTCTGTTTGCCAACGTTAAATACTACGTCAGCGG
TAAAGGCGATCCCAAGATTTTGAATTTGCTGCAAGAAGGTCGGGCTGAAAGAACCAATTATTTTAGTGATTTTGTTACAC
ACTTGATAGCAGGTTATGAAGCATCTGAAAGTGATATTTCTGCAGCAAAGGATTTGTATGAAATTCCAGCAGTTACACAA
AATTGGATCTTGTATTCTATAAATCGAGCAGACAGTAAGTCTCTCTGGGCAATGATAACGTTTCAAGGCGGCAAATGTCA
GCTACAATTAGATCGATATTGCACTCATTTGATTACGGGAAAAGCAAGCGGAGTAAAGTATGAAACTGCCATGAAACATC
ACATCAATATCGTAACGCCTGATTGGATAGTAGAATGTTGCAAGAAAGGTACTCTCATTAGCGAAGTGGAATACCATCCC
AGACTGCTAGTGTCTCCAAATAGTTCGACAGCTATGATCACTGGTTTTATGGACGAAGACACTGATAATAGCATTACGCA
AGAGGAGCAGGACAGGACTAAGGCCATGTTAGAACAACTCAAACAACGCATGCCGTGGAATCAGCCAAGTCCGCCTGTAT
CGTCGAGTGCTTCGCAAAATCTTGGTACAACTAACACAGTGACCGTTCCTTATTCTACGAATGGACAGAATACTGTGAAT
GTACAACCGCAACTGCCACGATCAGTTTCCTCGACTAATTTAAGCATTTCCACAGTTGTTCCATCGGCTTCCGATCAGAA
TGTTGTAAGTCAAGCCAATTGGCTTTCACAAGCATCTCAACAAAATAACATTTCTCAACAGATGAAAGCTGTGTCAACAC
AACAGCAAGAATTATCCCCGCAACAACAACAAATAAACATGCAACACCAATTGATACAACAGCAACAACAGCAATTGACG
CAACAACAACTCACGCATCAACAACAACAGCCGTCATACAATCAACAACTCCTGAATCAACAGCAATCCCCTCAGGTACA
ATCAGCACAACAGCAGCAGTTAATAGGGCAACAACCATCAATGATTACGCAACAGCAACAAATAAACTCGCAGCTACCGC
AACATCAGTTAACTACGCAACAACAACTATTAACATCGCAGCAAAAGCAACTTAATCAACATCAAATTATTCAGCAACAA
CAATTACAAACGCAACAGTCACATTTGACACAGCAACAGCCACAAGTGCAATTAGCGACTCAACAGCAAATAGTAATGCA
GCAACTACCATCTCAACAACAACAAATTTCAAGCCAACATCAATTGACCCAGCAGCAAACTCCACCGCAACAACTTACTC
CTGAGCAAAGACAACTCATTTTGTTGCAACAGCAGCAGCAACAACAACAGCAGCAAAAGATACAACAGATTTCACAGCAA
TTGCAACAATCTGCGCCACAGAGTACCCAACAGTTTGTTATAAGAGATGGCCAGCTGCAACAACAGCCACAGAATCAACA
ATTAATCGGACCGAATCAGCAAGGATTTATCGTGCAACGAGACTCGCAATGGCAGCAACAACAATATCATTTACAATTGC
AGAGACAGCAACAACAGATCGGTCCTCAGAGATCCGGAGGTCAATGGAACCAGCAGCCGTCTCAACTTCCTAGACAATTG
ATTCATTTGGACGCGCAGACGCATCAACAGTTGCAACAAATGGACCCGCAACAACGAGCTCAGTTTATCCAGAAAATTCA
GAAACAGCGGAATTTACAGATATTGCAGAGACAAATGCAGGGTCGTCAGGCACAACAAGGTCCGCACATTGCTGTTATAA
GGAGTTCTGGTAAACCGGTACAACCAGGCAGTCTACAATGGGTTCAACAGGCTCGACCGCAGATGATGGGACCGCAACTT
GCGCAAAATTCTGGACAGAAACCAGTGCATCCTGGGGTACAACCACCAGCGTTAACTCCGATAAATTCTTCCAATCAGGT
CATTGTACCAACTGGTCAGACTGTTCAGGGTCTGCAAACATCACAAACAGGACAGACATTCCAACAGGGACAATTAACAA
CTCAGCAACTAGCGCAGTTGCATATAAAGCAGCAACATATGGCCAGATTGCAGCAGTTGCAACATTTGCAACAGCAACAA
CAGCAGCAACAGCAACAACAGCAAGGCGCGCAACAGGAACCATCATTAACGTCTCTATCGAATAACGCGCAGATTCCGCC
GGATCAGCAACTCGTCGTAAATGCTAAAACAAAAACTGCATTGGCTAACATGCTAACTAACAGATTACAAAGTGGTGCTA
CTGAAGGTAGCGCAGCTGGCCAATTAAGATTGATGACTGCGCAGCACAGACCTCCGCCTCCTCCTTCGCAAGATCCGCAA
CTCTTGGCTTATCAAAGGAGAACTCTGGGAAATATAACAAACAGTGCATCATCAGGAGCATCTATAAAGATGCAATATAC
GCCAGTCATGACACAAAAATTCGAATTTTTTGGTCACAATCCACAATTGGCATTGCCGTCAGGTCTATTCATGTTAGGAT
GCATTTTCGTCATTGTCGAATACGATGTGCAGCGTCCAAATCAAGTATTAATTTGGAAACAAATTATTGAGAGACACGGT
GGCGAAGTAGAGTCACAATATTGCACCCGTGCGACGCACGTGTTAGCTATTACGCAAAAACATCCGATAGTGGTGCAAGC
GTTACGCGAAGGAAAGCGTTGCGTCAGCGCGCATTGGCTTTCTGATATTGTTAGTATGCAACACGTGAAACCACCTTGGC
ATCCTCTGCACTTTCCCACGCCATTCAGTTTAACCGAACTTCCTTGTGCTAAGCAAATTATATCGCTATCCGGATTCGAA
GGAGAAGAACGAGCAAATGTCCAATATATGTTGGAAACTTTGGGTGCCAAGTATACAAACTACTTCTCTAAACACAATAC
TCATCTTGTTTCTAGAAGGTCTGATGGACAGAAGTATAAAAAAGCACGCGAATGGCAAACTACCGTTGTGAACGCACAGT
GGTTGTCAGACTTGCTTTGCGGACAAATGAATGCTTTGCATCAGTTTGAGGCTCCAAAGTATCAACAGTTTAGTCTGAGT
AATCCTTTCAGACTAGATTATTCACTAGTGGCTCATCTTATGGGTGCTTGGAAAATGCCAATAAACATTACTCAAGAATC
ATACAACAAAATAAAACAAGTTGACCAGACTCCAAATTCAATCAGAAAATACAAAAAGCCACGATTAGATGGGCCATTGT
TAAATAAAGATCCTCATCTTTTGGGTCTGGATGAACCGATTGTTGTTAGCAATCCTGACCCTCCACCACTCGAGAAACAG
CCGAGAATACTATTTTCTGGCATAAACCCCAGAAAGCATGCCAAGAGAATTCGAGAATTAGGAGGTGCTTTGGCTGCTAG
TTGGCGAGATGCTACTCATCTTATAATGTTAACACCGTTACGAACTGTAAAACTATTATGTTGTTTATCACGATGTAAAT
TTATTGTCAGTTTGCAATGGTTACTTGATTGCTCTACAAAAAATACCTTTGTGGACGAAAGTGCATACATGCTCGGTGAT
CCAGAATTCGAGAAAAACTTTAATTGCAATATTGAGAAAGCTTTAGCGAGTCCCAATCGAGGAACAGTACTTACGGGAAA
AATATTTTATGTAACACCAAGTGTGATACCATCTCTTTCGGCAATCGCGGAAATAATAGAAAGTGCAGGAGGCACAATGG
AAAAGTCGCGTAGATCGATCGCGCAGATACAAGAAATGAATGCTGGGAAATTGAGTTATATTATCGTAACCCATGAGAAC
GATCTTCATCTTCTTTCTGACGTTCTACGTGCAAATATAAGTGTGTACAGTGCGGAAATTGTATTAAGCGCAGTTGCACG
ACAATACTTCCAACCTGACACGAGTCAAGTCTAA
PEP:
>LH17445-PA
MGDIRAGLDDLKLDGALFANVKYYVSGKGDPKILNLLQEGRAERTNYFSDFVTHLIAGYEASESDISAAKDLYEIPAVTQ
NWILYSINRADSKSLWAMITFQGGKCQLQLDRYCTHLITGKASGVKYETAMKHHINIVTPDWIVECCKKGTLISEVEYHP
RLLVSPNSSTAMITGFMDEDTDNSITQEEQDRTKAMLEQLKQRMPWNQPSPPVSSSASQNLGTTNTVTVPYSTNGQNTVN
VQPQLPRSVSSTNLSISTVVPSASDQNVVSQANWLSQASQQNNISQQMKAVSTQQQELSPQQQQINMQHQLIQQQQQQLT
QQQLTHQQQQPSYNQQLLNQQQSPQVQSAQQQQLIGQQPSMITQQQQINSQLPQHQLTTQQQLLTSQQKQLNQHQIIQQQ
QLQTQQSHLTQQQPQVQLATQQQIVMQQLPSQQQQISSQHQLTQQQTPPQQLTPEQRQLILLQQQQQQQQQQKIQQISQQ
LQQSAPQSTQQFVIRDGQLQQQPQNQQLIGPNQQGFIVQRDSQWQQQQYHLQLQRQQQQIGPQRSGGQWNQQPSQLPRQL
IHLDAQTHQQLQQMDPQQRAQFIQKIQKQRNLQILQRQMQGRQAQQGPHIAVIRSSGKPVQPGSLQWVQQARPQMMGPQL
AQNSGQKPVHPGVQPPALTPINSSNQVIVPTGQTVQGLQTSQTGQTFQQGQLTTQQLAQLHIKQQHMARLQQLQHLQQQQ
QQQQQQQQGAQQEPSLTSLSNNAQIPPDQQLVVNAKTKTALANMLTNRLQSGATEGSAAGQLRLMTAQHRPPPPPSQDPQ
LLAYQRRTLGNITNSASSGASIKMQYTPVMTQKFEFFGHNPQLALPSGLFMLGCIFVIVEYDVQRPNQVLIWKQIIERHG
GEVESQYCTRATHVLAITQKHPIVVQALREGKRCVSAHWLSDIVSMQHVKPPWHPLHFPTPFSLTELPCAKQIISLSGFE
GEERANVQYMLETLGAKYTNYFSKHNTHLVSRRSDGQKYKKAREWQTTVVNAQWLSDLLCGQMNALHQFEAPKYQQFSLS
NPFRLDYSLVAHLMGAWKMPINITQESYNKIKQVDQTPNSIRKYKKPRLDGPLLNKDPHLLGLDEPIVVSNPDPPPLEKQ
PRILFSGINPRKHAKRIRELGGALAASWRDATHLIMLTPLRTVKLLCCLSRCKFIVSLQWLLDCSTKNTFVDESAYMLGD
PEFEKNFNCNIEKALASPNRGTVLTGKIFYVTPSVIPSLSAIAEIIESAGGTMEKSRRSIAQIQEMNAGKLSYIIVTHEN
DLHLLSDVLRANISVYSAEIVLSAVARQYFQPDTSQV
Swiss-ProtPAX-interacting protein 1
KEGG     K14972     
SUPERFAMILYSSF52113  BRCT domain superfamily     
Gene3DG3DSA:3.40.50.10190     
PfamPF00533  BRCT; BRCA1 C Terminus (BRCT) domain     
SMARTSM00292     
ProSiteProfilesPS50172  BRCT; BRCT domain profile.     
CoilsCoil

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