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Gene detail [Fasta]

Species Linepithema humile
GeneLH21375
Positionscf7180001005005:4309156..4319480[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH21375
sequence mRNA: 
>LH21375-RA
ATGGGCAGGGATTCGATGTGGCATTTGTCGTGCGTCGACGACTTCTTGAACCGCGCGTTTTACAAAGTTGGCCTCGTTGT
TGGCCGACATCCCGGTTACTTCATAATCGTGCCAATACTGTTGGCATGCATATGCTTCACCGGCTACCAGAGGATACACT
ACGAAATCGATCCGGAATACCTTTTCTCGCCTATCAACGGCCCCGGGAAGACCGAGCGAGCGATAGTCGAACAGTACTTC
AAAGTCAATTATAGTCAATTCAGTGTCGCTCGTATCACTAGGCCAGGCCGATTCGGTCATGTAATCGTGATTCCCAAGGA
TGGCGGGAATAACATGCTGAAGAGCGCAATTTGGCATGAGCTGGAGGAGCTCGATCAAATTATTCGGAACGTCAAAGCGA
AATACGAGGATGAAATATTCACATACGAACAAATTTGCGCACGATGGCTTAACAAGTGCTTCAACAACGACATCCTAAAT
TTAAGTCATATAATAAGCCAGGTGGAAAAACGGGAATATAATCTGACGTTCCCGATGTATTTGAATCCAGTCACGTGGGA
CATTCACTTATTCCCGGTGTACTTCGGCGGAAGCGTCATCAATGATGATCTCACTATAGAATCGGTGCCCTCGGTACAAC
TCGGCTATTTCGTCACCGTCAACAGTTCACGGCAGGACGCAATCGGAGCCGCCTGGGAGGAGGCTTTTCTGGATGCCGTC
GGTAAGGTCGAGGACGAAGGTGCGTTCAAGCACATTAGCATCGCGAGATTTGCCTCGAGGACCCTCGAGCTGGAGCTGGA
GGCTAACACCAAGACGGTGGTGCCATATTTCACCAGCACGTTCATTATAATGGCTCTGTTCTCGATCGTGACATGCATGA
TGACCGATTGGGTGCGTAGCAAGCCTTGGCTCGGGCTTTTGGGCAATCTTTCGGCCGCTATGGCGACAGTAGCTGCCTTC
GGTCTATGTATCTATCTAGGGATCGATTTCATTGGCATCAATCTCGCCGCGCCATTCCTTATGATCGGAATAGGAATCGA
TGATACTTTTGTCATGTTGGCGGCTTGGAGAAGGACAAGTATTACCAAACCGGTACCCGAAAGAATGGCAGCAACACTGA
GTGAGGCTGCCGTTTCTATTACCATTACATCTTTAACGGACATGATATCTTTCTTCATCGGCATTCTCTCGCCCTTCCCT
TCGGTGCAGATTTTCTGCATTTATTCAGGTTTTGCGGTAGTTTTCACCTTCCTGTTCCATCTAAGTTTCTTCAGTGGATG
CGTCGCGATCAGCGGTTATTGCGAACGAAAAAATCTGCACAGTGTAGTGTGTTGCAAGGTGGAGCCTTTATCTAAATCGA
CTCATCGATCGTGGCTCTACAGAGTATTTTGCTCCGGTGGAATTGATCCTGACGACCCTCACAATCCAATCGACAACCCT
GAACACGGATGTATGACTTGGTTCCGCGATTATTTGGCGGCCGCGTTAAATTGTCGCCCAGTGAAAGCAGTTATCATTGT
CGTTTTTGTGTGCTACCTTCTCGGCGCCCTTTATGGCCTGACAACCCTTAAGGAAGGCTTGGATCGACGCAAGCTTTCCA
AAGAAGATTCCTATTCGATCGCTTTCTACGACCGCGAGGACTTTTACTTCAGAGAGTTTCCTTACAGGATACAGGTGATT
ATAAGCGGCGAGTATGACTATAGCAATCCAGTGATTCAAGAGCAAGTGGAGAATCTGATGAAAAGCCTCGAGGCGAGCAA
GTACATCAGCGCGCCGGTCTACAGCGAGAGCTGGCTGCGCAGTTTTCTCAGCTATGTGTCGGATAATGAAGATTACTTGA
ACGTGACTATCGATGATGAGAGTAGCTTCAATGAGGCCCTCAAGGCTTACTGGCTGTACCCGATCACCTCCAACACTTTG
GATGTCAAGTTCGACGATGCGAACGAGAAAATTATAGCGAGCCGATTCCTGATACAAGCGGTGAACGTGAGCGGCACGAA
CCAGGAAAAGGACATGGTGAAAGAGCTGCGCGGCATCTGCAAGGCGTCACCGCTGAACGCGAGCGTGTTTCATCCTTACT
TCGTGTTCTTCGACCAATTCGAGCTGGTCCGGCCGACCAGCATCCAGTGCATGATCTTCGGCGCGCTCGTCATGATGCTG
ATCAGCTTCATCTTCATCCCCAACGTGTTTTGCTGCCTGTGGGTCGCCTTCTGCATCGTGTCGATCGAGCTGGGGGTGGC
CGGCTACATGGCGCTGTGGGACGTGAATCTCGACAGCATCTCCATGATCAATCTTATCATGTGCATCGGCTTCAGCGTCG
ACTTCACGGCGCACATCTGCTACGCGTATATGAGATCGAAGCGATCGCGGCCGGAGGACCGGGTCAAGGACAGCCTGTAC
AGTTTAGGTCTGCCGATAGTTCAAGGCGCGGCGTCGACAATACTCGGTCTGATGGCGCTCCTGCTGGCCGGCACCTACAT
TTTCATGGTGTTCTTCAAGATGGTCTTCCTCGTGATCTTCATCGGCGCCATGCACGGTATGTTCTTGCTGCCGGTGTTGC
TGTCCCTCTTCGGGCCCGGCGCCTGTAGCGGCGGCCACGACGAGCCGGAGGAGACGGAAAATTCAAAGAACGGCGCGCAG
GAGAAGGAGCTGCCGAGCAAGCTTCAGCAGCCCTACGTGATCCCGCATCCCCATCTAGTCTACTACACCGCGAACGCCGT
CAAGCCGCTCCAGGACAGTCCGGCGATGAGCATGGCGGCATTCGAGGAGCGGGATCCAGGCCTGGGCACCAGCGAGGACA
GCAACTCGACGGAGAGCGGCTCCTCGCAGAGCAGACGGCGCCAGTGCAAGCAGGATCAGCAAGACCAGCCGAGCCAGATC
CGTCACGATATGTGGAGGAGGTCCGTCGGTGTTCTGTACGGCCTGTCGCAGTTCCAATCTGCGATCGGCGAACCAGCGCA
CCCGGCGCCGGATTATCCTGGCGCTGTGGCGCAAGCCCGAGAACCGCTCGGCGAGGACAATAATAATCCGCGAAAAACGG
TGCCTTATCTGGGACCTCACGTCGCACGTCACCACTTGAATCACTTTCCGCAGAACTGTAGACGTAGCAAATCCTACCAC
AATCTGCAGTATTCTGCACCCGCGCGGCATTTAACGGATCCCCGATACCCTTAG
PEP: 
>LH21375-PA
MGRDSMWHLSCVDDFLNRAFYKVGLVVGRHPGYFIIVPILLACICFTGYQRIHYEIDPEYLFSPINGPGKTERAIVEQYF
KVNYSQFSVARITRPGRFGHVIVIPKDGGNNMLKSAIWHELEELDQIIRNVKAKYEDEIFTYEQICARWLNKCFNNDILN
LSHIISQVEKREYNLTFPMYLNPVTWDIHLFPVYFGGSVINDDLTIESVPSVQLGYFVTVNSSRQDAIGAAWEEAFLDAV
GKVEDEGAFKHISIARFASRTLELELEANTKTVVPYFTSTFIIMALFSIVTCMMTDWVRSKPWLGLLGNLSAAMATVAAF
GLCIYLGIDFIGINLAAPFLMIGIGIDDTFVMLAAWRRTSITKPVPERMAATLSEAAVSITITSLTDMISFFIGILSPFP
SVQIFCIYSGFAVVFTFLFHLSFFSGCVAISGYCERKNLHSVVCCKVEPLSKSTHRSWLYRVFCSGGIDPDDPHNPIDNP
EHGCMTWFRDYLAAALNCRPVKAVIIVVFVCYLLGALYGLTTLKEGLDRRKLSKEDSYSIAFYDREDFYFREFPYRIQVI
ISGEYDYSNPVIQEQVENLMKSLEASKYISAPVYSESWLRSFLSYVSDNEDYLNVTIDDESSFNEALKAYWLYPITSNTL
DVKFDDANEKIIASRFLIQAVNVSGTNQEKDMVKELRGICKASPLNASVFHPYFVFFDQFELVRPTSIQCMIFGALVMML
ISFIFIPNVFCCLWVAFCIVSIELGVAGYMALWDVNLDSISMINLIMCIGFSVDFTAHICYAYMRSKRSRPEDRVKDSLY
SLGLPIVQGAASTILGLMALLLAGTYIFMVFFKMVFLVIFIGAMHGMFLLPVLLSLFGPGACSGGHDEPEETENSKNGAQ
EKELPSKLQQPYVIPHPHLVYYTANAVKPLQDSPAMSMAAFEERDPGLGTSEDSNSTESGSSQSRRRQCKQDQQDQPSQI
RHDMWRRSVGVLYGLSQFQSAIGEPAHPAPDYPGAVAQAREPLGEDNNNPRKTVPYLGPHVARHHLNHFPQNCRRSKSYH
NLQYSAPARHLTDPRYP
Swiss-ProtPatched domain-containing protein 3
SUPERFAMILYSSF82866  Multidrug efflux transporter AcrB transmembrane domain superfamily     
Gene3DG3DSA:1.20.1640.10     
PfamPF02460  Patched; Patched family     
ProSiteProfilesPS50156  SSD; Sterol-sensing domain (SSD) profile.     

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