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Gene detail [Fasta]

Species Linepithema humile
GeneLH21332
Positionscf7180001005005:3434886..3438881[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH21332
sequence mRNA: 
>LH21332-RA
TACGTCGGCTTAGTCAACCAAGCGATGACTTGTTACTTGAACAGTCTTCTCCAAGCATTGTACATGACGCCGGAATTTCG
GAATGCGTTGTACAATTGGGAATACGTAGACGGCTCCGAAAAGGATGAAGCTCTAAGCATACCATATCAATTGCAGAAAC
TATTTCTCAATTTGCAGACATCTACGAAATCTGCGGTCGAAACTACATCATTAACTAAAAGCTTTGGATGGGATTCTACT
GAAGCATGGCAACAGCATGACATTCAGGAACTTTGTAGAGTTATGTTTGATGCATTAGAACAGAAATTCAAAAATACAGA
ACAGTCTGACCTAATCAACAGGCTTTATGAAGGAAAGATGATTGATTACGTCAAATGCCTTGAGTGTGGAACAGAAAAAT
CAAGGGAAGATACGTTTCTCGACATCCCATTACCAGTTAGACCATTCGGCAGCCATGTCGCGTATAACAGTGTGGAAGAA
GCAATTAGAGCGTTCGTTCAGTATGAAACATTGGAGGGAGCTAATCAGTATCATTGTGAGAAGTGCAACAAAAAGTGTGA
TGCTCATAAAGGATTAAAATTCACAAAATTTCCATATCTGTTAACTCTACATCTCAAACGGTTCGACTTTGACTACAAGA
CCTTTCATCGAATCAAGCTTAACGATAAAGTCACGTTTCCGGATATATTAAATTTAAATTCCTTTATCTCGTCCACAACG
AGTCAAGAATCTCCGGGTGGCGAGGAAGATATCGGTTTAGGTATTAAATGTGATGATAGCTCGACGACAGATAGCGGAAC
TTTAGATGACGATTGCGTGCCGTGTGATAACAGTCTGTCAAACAGCAATCATTCGGCGAATCACGACCAAGACGATGATG
AAGGTATTGATATGAGTAATGGACCGTCGACATCGAGCTGCACCATGCACAATCACGAGAATGAAAAGAACCGCGGCACT
TACATGCTGGAAAAAGGCCCGTACATGTACGAACTATTTTCAATCATGATTCACAGCGGTAGTGCGAGCGGTGGTCATTA
TTATGCTTATATTAAAGATTTCCGGACGCAAGAATGGTTATGTTTTAACGACCAAAGTGTAACTCAGACGCTGCTGAAGA
AAATGAAGGAAAGTGAAGAAAACGATAGAAAAAATCGTGAGAAACAAATGTCTGTACCTAGATTAAAGGTATACTGTCAT
CATCCGGTGGAGGGAAAGTTGATGAACATCAAGTTATATGTTATGCCTGACATTACGTGGTTCGAAGCAACGGAGAAAGC
ATATAGGAAATTCAATCTGGAAAATGTAGTGAGTCTAGATCAGTGTCGTTTAGTTAGTTACGAGCATAATACGGATTTAA
TAGAATGCAGTTACGATGATCGAGAGCACGAAGCCGTTGGGAATATATGGCGTATTTCACGTCGCTTCGATTTTTTGTTA
GAAATTCGGCGGAAAGATCAGAAGTTCGAGACGTATTTGCCAGGCGGAGTCGCAACCAAGGTGTTTGTCATAGACGTGAC
CAGAGAGGAGGTAATTGACGGTCCGATCGATATCCGGGGTTCATTGTCGCAAAGTGTTAAAGAGTATAAACAAACCGTAG
GAAAAATTATTAATATGGATCCTAAGCAAATGAAAGTAATATTACTAAAGTTTCCGGAGACTAGACCCGTGGAAAACGAA
GACAGCGATCTTCAGACTGAAGGATTTTATAATGCAAACAAAGTATTTATATCAACGATGTACGACATAGATAATAACAA
GTCTTTTCAAGAGTCAACAGTGCACAGAATCATAGAGAATTTTAGACATGTTATTTCGCTGCATGTCCAATTGCCAGACA
CCAGCAAAGAAATGTTGGAAGAATTGAATATCCCGTTGCTGGATGAGAAATATGAGGAAAAGGAATCATTACCAATCAGT
AATGGTTCGTCTAAACTAGGCGTTAATGAGTCACATTGGGACGTCAATCTGAAGTACAATGAAACCCTGAAAGGTGCGCG
AAATAGCGACGACACCACCATACGAAACATAAGTCCTCAGTTGGGAGAACTCCTCAACGAGGAATGGAATACTCCCGAAC
AAAGTAATAGCGAAGACAGTAGTCTTAGCGATAGTGATAAAACGTTGGTCGGCGATGCGCCGGAAGGCGTCTTCGTTCAA
TCGCATTCGTTGAGTCGGAAATACAGGATGTCGAATCAGTTTGAAATAGAAAACTGGGACGACGACGACTCCGATTATTA
CTTCAGAGCTACGCCATATATAGATAGCACTCAACAAAAACTACTTAAAGTATTAGTAGATAAGAGAATGAGATTAAGCA
CTTTGAAGAAGGATTTAGAGCCGCTTGTGGGAGTACCTGTGGAATACTTCAAAGTTTTTCGCCTGTCGAATTCCGGCGAG
TCGGAGTGCAGCTGTTTGACGGAGCAGCTTAACGCGTACGAAGACGGTGAAAGACTTAATGTGAAACTCGGACGAGCCTT
GCGTAACGGAGAGTTCAAAGTGAAGTTATATCAACTATTAATCGATTCCACTGAGCCTTACAAATTTTTGTGCGAATGGA
TTGTCTCGAAAGATATGGCAGTCGGACATGCAAAGAAAGAGATACTGGCAGAAATAAAGAAAAAGTATGATATAGATATA
CCGTATGAAAAGTGCCGACTTAGGAAAAAGTATTATAAAACAGCCTCAAAAGTATTCCTAAACGAACAAAAGTTCGAAGA
TCTGCGATTTCATTCGCAATTCGAAATGATCGTTCAAGAACTTCCGGATAAAGAGACAGTCATAGACACCAATCAGATAG
TATTGTTTGTCAGAAGGTGGTTACCAGCGAAATTGCAACTAGCACAATTCCAAGAAATTGTCATGGATAATAGAACCGTC
GAAGAACTAAAGAAAAAA
PEP: 
>LH21332-PA
MTCYLNSLLQALYMTPEFRNALYNWEYVDGSEKDEALSIPYQLQKLFLNLQTSTKSAVETTSLTKSFGWDSTEAWQQHDI
QELCRVMFDALEQKFKNTEQSDLINRLYEGKMIDYVKCLECGTEKSREDTFLDIPLPVRPFGSHVAYNSVEEAIRAFVQY
ETLEGANQYHCEKCNKKCDAHKGLKFTKFPYLLTLHLKRFDFDYKTFHRIKLNDKVTFPDILNLNSFISSTTSQESPGGE
EDIGLGIKCDDSSTTDSGTLDDDCVPCDNSLSNSNHSANHDQDDDEGIDMSNGPSTSSCTMHNHENEKNRGTYMLEKGPY
MYELFSIMIHSGSASGGHYYAYIKDFRTQEWLCFNDQSVTQTLLKKMKESEENDRKNREKQMSVPRLKVYCHHPVEGKLM
NIKLYVMPDITWFEATEKAYRKFNLENVVSLDQCRLVSYEHNTDLIECSYDDREHEAVGNIWRISRRFDFLLEIRRKDQK
FETYLPGGVATKVFVIDVTREEVIDGPIDIRGSLSQSVKEYKQTVGKIINMDPKQMKVILLKFPETRPVENEDSDLQTEG
FYNANKVFISTMYDIDNNKSFQESTVHRIIENFRHVISLHVQLPDTSKEMLEELNIPLLDEKYEEKESLPISNGSSKLGV
NESHWDVNLKYNETLKGARNSDDTTIRNISPQLGELLNEEWNTPEQSNSEDSSLSDSDKTLVGDAPEGVFVQSHSLSRKY
RMSNQFEIENWDDDDSDYYFRATPYIDSTQQKLLKVLVDKRMRLSTLKKDLEPLVGVPVEYFKVFRLSNSGESECSCLTE
QLNAYEDGERLNVKLGRALRNGEFKVKLYQLLIDSTEPYKFLCEWIVSKDMAVGHAKKEILAEIKKKYDIDIPYEKCRLR
KKYYKTASKVFLNEQKFEDLRFHSQFEMIVQELPDKETVIDTNQIVLFVRRWLPAKLQLAQFQEIVMDNRTVEELKKK
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 47
KEGG     K11857     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:2.20.210.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
ProSitePatternsPS00973  USP_2; Ubiquitin specific protease (USP) domain signature 2.     

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