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Gene detail [Fasta]

Species Linepithema humile
GeneLH21262
Positionscf7180001005005:2200465..2213782[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH21262
sequence mRNA:
>LH21262-RA
ATGAAGCTCTTTAAATTGATAGTGCATCAAAAGAATTTTAGTGGGGAAGATCTAATAATCAATCCGAAAGATTACCCTGG
TATAAAAACTGGCGATGTCGTGGAAATCTATCATTCAGAAGATGAGTTCAGTCGCTTATTGTTGCAAGTTACCTCTTTCA
AGGAGGATCTTCAAGGACGTGAGACTATTAGTGTGGAGAATAACGTAGCCTCGATGTTCCAGTTAAGAACATTTGCCGAT
GTATATATGAATATAGTCAATCCAGAAGACGTAGCTCTAGATTCTATAGAATTGACTTTCAAAGACCAGTACATGGGGCG
CAGTGAGATGTGGCGTTTAAAGAACAGCTTGGTGAACACTTGCGTTTATATTAATAAGAAAATAGAGTTTTGTGGCGCCT
GCTTAAGATGTCAAGTGCATGAAATGTGGTCACAGGGCGATCGTGTTGCCTGCGGTGTTATAACAGACGATACTAAGATA
GTATTTCGTTCTTCTACAAGTATGGTATATCTGTTTATTCAAATGAGTTCTGAAATGTGGGATTTTGATATACATGGAGA
TCTTTATTTTGAGAAAGCAGTCAATGGATTTTTATCAGATTTGTTTCAAAAATGGAAGAAGAATGGCAGCAATCATGAAG
TTACAATTGTACTCTTTTCGAGGACTTTCTACAATGCGACTAGCTTGGAAGAATTTCCAAATCATATGAGAGAATGCTTG
CAACATGATTATAGAGGGAGATTTTATGAAGATTTTTACAGAGTTGCAGTGCAGAATGAAAGATTTGAGGATTGGAGTAA
TATCTTGGTACAATTACGCAAACTGTTTACTGATTATCAAAAAATTGTTTTGGAGTATCACCAAAAGCCGGGCACTACTA
TGCCCAAAGCAGTGAATTCCACCGCTGCGCAAGGCAATTTTCTGGAAGTGTTAAATATGTCTCTAAATGTTTTTGAGAAA
CACTACTTGGACCGCAGTTTTGACAGAACTGGTCAGTTATCTGTGGTGATTACTCCTGGAGTTGGAGTTTTTGAAGTTGA
CAGAGAGCTGACAAATGTGACAAAGCAAAGAATCATTGATAATGGTGTAGGCAGTGATTTAGTATGCGTTGGAGAGCAGC
CACTTCATGCAGTTCCTTTATTAAAATTCCATAATAAAGATTCTTCTATTAATGCACCGGATGACTACAGCATGCCTCAC
TGGATAAATCTTAGTTTTTATTCCACTAACAAAAAGATTCCCTATTCTACATTTATACCGCGAATCAAGCTGCCGCAAAG
GGTGTCGAAGCATCTTGCAGATAATGGAAAATTAAATTGCAAAACTAGACTTCTGCAGGAAGATTCAAGGGAATGTCTAC
ATAATACTTTATTCGATTATGATGCTTACGACGCACAAGTGTTCCAATTGCCAACAGTTCATACTTCAAGCGTACAAAGA
ATAAGTACAAGAACGAAAAAGACGAGTGTAGCGTGTCTTGAAACACATAACAATGGTCATTTGTTAAAGCTCTTGAAACG
TAAAATGTCGGATCCTGATATACATCATCCTCCACCTGAGACACATTCGCCACCAGTTGCTACGTCACGGAGTGCAGCGA
TAACGATTCCACATAAAATTGACGACGATAATAACGAATCTAATGGCGAAAGAACTGGTGTATCTAGAACACCAATTAAG
AATGATTTGACGGATTCGGAGATATCTCCGCCTTTTAGGCCTGTTGTTGGTAGTGCTGGTAGTCCGACGAATTCAATTTC
TCAACCAACAAATATACTTAGACCTGGCAGAGCATTAATCAATCCTTTCGATCCATCGCACGTCACCATTAAACTTACCA
GACCAACAGGAGTGCTGATACAACAACATCACTATCAAGCTGTTCCGACACAAACATGCTCGGAGTCACAAAGTGAGATT
ACTTCATCAACCCTGAGCGGATCACCGATGGAACTTGGAGCGAACAATGCAAATCAGATTTCGAGATCAGCGTCCCAAAC
AGGATTTCAAGATCATACAAAAGGAAAGCCATTGCGTTCCAATCCTACAGCTAATGGAGAGAAAGCTGTAAATCCTTCTT
CAACTATGGCGAATAAGAGTTTGACTCTTTTGTGGGGTGCCACTGGTGAGCAAGAGTGGACGCCTGCTCTTACAACAGGA
GTCGATTGGAAATCGTTAACGATTCCCGCGTGCCTACCTATCACTACAGATTACTTTCCGGACAAGCGAAGTTTGCAAAA
TGATTACGTCGTGTCAGATTATAATCTGCTTCCGGACGACGTTAACGCTGATTTTGCTCAACAACGAGCGATATACAAAA
AACCGCTCACAACCGTAGAAGTGTTTAAAGAGCTGGTTTCACAGCGCTTGGCTCAGGGTTTCCAGTTAATAATTTTACCA
TCGGTTAACAAAAATCAAAGCAACGTGGTTGGTAGCAATGTCGCCGCGTCGATTAGTACAGTAATACGCGGCAGGCAGAC
CGAGTCCGAACCTAAAGAAGAATATCTGCTTAGCATTGGAAGAATTTTTCATAAGATATCTCTGTTCGATAATTCTATAA
CAGTCACGAGGTATCGTCCGAGGCATCCTTATCCACCTTTCAATATTCACTATCGATATCGGTTCCACGCTCCGCATCAT
GACACGTACGAAGTGTCGTGGGTGTCTTTCACGACAGAGAAACTCGAGACTTACAACTGGAACTATCTGGATCATTATAT
TTGCACACGAGGCCACACCGATTTCGCTTTAGTGGAAGCTCTCAAATATTGGAGGTTTCGGGTATTTTTATTGCCACTTC
ACAATCATGCGACCCGCAAAATTTTGGAGGGTTCCTCGAGATGCGACATATACACACCGCCCAGCAATGCTGAGCAGGCA
TCATTGATGGACGGTTTCCTGCGTTTCATCGAGGGGTGGCTGAACAAAATACGACGGCCAAACCCCAATAAAAACTGGAG
CCCCACAGCTCTAGGTGGTGTCCCTCCAAGAGATCCTGCCTCTCATTTGACCAGACGCAGGCACAGCACGAGCCTGATAT
TCCTCACTAACCAGACCAGTCTAGTCGGCAGCTCTCCTTTCAGGGAGCGACTCGGGAGCAACCGTCTGCCAGAGAAACCG
AGACCAAGATCAGGCTCCAAAGTGATGGACAGAGGCCGTGTATCGCCTGCTAGCGAAGCCGTTTTGCCGTTGTCGATCGA
GCAACAACAACAGGATCATTTTGATACCAATGACGACAGTACGAGCATGGAGTTGACGAAGATAAAAAGCAATGCGACGA
ACGCGGAAATTTTGGAGGCCATGAAACACCCTCAGACTGGTGTCGGTTTCTTAACGCAACATCCCTCACTTCCAAGCCAA
ACATTTGTTAGTGCCGACGCGATCCAATGGTTAAATAATCATATAGAAGGCGGTGTGGAAGTCGAGCAAAGTATTAATAT
CATGAAGGGAATGATTCAAGACAAATTAATATGCCATGCATCCGGCGACTTCTCGCAACCATTTATCTTGGGATTTTATT
TGTATCACATTGTGCAAGATAAGGAAAATCAAAAAGCCGCGGATTATTCCGCTCCACTTGGTGATCTACAGAGTTTCGAG
AACGAGTGGGTGGAGGTGGAGATGAGACCGCCGAAAGGGTGGTGCGAACAAACATCTTCGATAACACTGTCAACAGTTTC
ATCTCCCATAACCATACCTAGTTGCGACACGATTGACGAATCCAATGTTCCACCTTTCTTGAGAGACGACATCGATTTGA
CGGAATCGATAGACGATAGAAATTGCACGGTGCCATTGTATAAACACACTCACCTTGATATCGACATTAATACTAAAAGC
GATAGGATCGAGTGGGGTCATTTAAGGTATCAATCTACTTACAAAGTTGATCATTCTTACGAACTCGTGGCGCAATGGGT
GGCATCGTCCGGCAGTATAGTGGCCGATCTAATATTTGTTTGGCATCGCAAAGCTCAAATGTGCGGGATACAGATGGTGC
CCATTCCTAGCGACTTATTAGCACTGCCATATACCTTGAAGAGCGATCCTCTCAGAGGACCTATTTTCATACCACTCGAC
ACGGAATGCTTGATGACGAATAAACGATATCTCTTTGAAGAGTTTCGGGAAGATACGTACGCGCAAAGACTATTTTTATT
TCAAGAGGCAATTCTGCAGAGATTCGGCTTCGTATCGTGCTTAGTTGAGAACACGGAGCATGATCGTCAATACGTTCACC
TCACTGGCAACGCATTTATACTAGTGCCATCGACTACGAATACTCGACCGCGTCCACGGACCGGTACCAACGTTGTGCGG
CGGAACATGGGACAGAAAAGGTATCCGGTCCATCCGGACCAGCCGAGTCCGCATGAAGCGTACATCACTAGGCATGTTGG
TGGCAAAAATAAGGATGACCATAATATGGACAGAAGAATGGGTTTTTTGTGGTCCTGGAATCACATGGTCAGTCGCAAGT
GGAGGTCCACCTCGACGGGCGATGAATTATTTCAGAAAAAAATCATAGAGGATTTCCGACATTTCTGTTCCAATGGAGAC
AACAGACTCAAGTTGTTTTGGGAAAGCTGTTGGGAGTTGAAGGAGAAAACGTGTACAAAAACCAAATAG
PEP:
>LH21262-PA
MKLFKLIVHQKNFSGEDLIINPKDYPGIKTGDVVEIYHSEDEFSRLLLQVTSFKEDLQGRETISVENNVASMFQLRTFAD
VYMNIVNPEDVALDSIELTFKDQYMGRSEMWRLKNSLVNTCVYINKKIEFCGACLRCQVHEMWSQGDRVACGVITDDTKI
VFRSSTSMVYLFIQMSSEMWDFDIHGDLYFEKAVNGFLSDLFQKWKKNGSNHEVTIVLFSRTFYNATSLEEFPNHMRECL
QHDYRGRFYEDFYRVAVQNERFEDWSNILVQLRKLFTDYQKIVLEYHQKPGTTMPKAVNSTAAQGNFLEVLNMSLNVFEK
HYLDRSFDRTGQLSVVITPGVGVFEVDRELTNVTKQRIIDNGVGSDLVCVGEQPLHAVPLLKFHNKDSSINAPDDYSMPH
WINLSFYSTNKKIPYSTFIPRIKLPQRVSKHLADNGKLNCKTRLLQEDSRECLHNTLFDYDAYDAQVFQLPTVHTSSVQR
ISTRTKKTSVACLETHNNGHLLKLLKRKMSDPDIHHPPPETHSPPVATSRSAAITIPHKIDDDNNESNGERTGVSRTPIK
NDLTDSEISPPFRPVVGSAGSPTNSISQPTNILRPGRALINPFDPSHVTIKLTRPTGVLIQQHHYQAVPTQTCSESQSEI
TSSTLSGSPMELGANNANQISRSASQTGFQDHTKGKPLRSNPTANGEKAVNPSSTMANKSLTLLWGATGEQEWTPALTTG
VDWKSLTIPACLPITTDYFPDKRSLQNDYVVSDYNLLPDDVNADFAQQRAIYKKPLTTVEVFKELVSQRLAQGFQLIILP
SVNKNQSNVVGSNVAASISTVIRGRQTESEPKEEYLLSIGRIFHKISLFDNSITVTRYRPRHPYPPFNIHYRYRFHAPHH
DTYEVSWVSFTTEKLETYNWNYLDHYICTRGHTDFALVEALKYWRFRVFLLPLHNHATRKILEGSSRCDIYTPPSNAEQA
SLMDGFLRFIEGWLNKIRRPNPNKNWSPTALGGVPPRDPASHLTRRRHSTSLIFLTNQTSLVGSSPFRERLGSNRLPEKP
RPRSGSKVMDRGRVSPASEAVLPLSIEQQQQDHFDTNDDSTSMELTKIKSNATNAEILEAMKHPQTGVGFLTQHPSLPSQ
TFVSADAIQWLNNHIEGGVEVEQSINIMKGMIQDKLICHASGDFSQPFILGFYLYHIVQDKENQKAADYSAPLGDLQSFE
NEWVEVEMRPPKGWCEQTSSITLSTVSSPITIPSCDTIDESNVPPFLRDDIDLTESIDDRNCTVPLYKHTHLDIDINTKS
DRIEWGHLRYQSTYKVDHSYELVAQWVASSGSIVADLIFVWHRKAQMCGIQMVPIPSDLLALPYTLKSDPLRGPIFIPLD
TECLMTNKRYLFEEFREDTYAQRLFLFQEAILQRFGFVSCLVENTEHDRQYVHLTGNAFILVPSTTNTRPRPRTGTNVVR
RNMGQKRYPVHPDQPSPHEAYITRHVGGKNKDDHNMDRRMGFLWSWNHMVSRKWRSTSTGDELFQKKIIEDFRHFCSNGD
NRLKLFWESCWELKEKTCTKTK
Swiss-ProtDEP domain-containing protein 5
SUPERFAMILYSSF46785       
Gene3DG3DSA:1.10.10.10     
PfamPF12257  DUF3608; Protein of unknown function (DUF3608)     
SMARTSM00049     

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