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Gene detail [Fasta]

Species Linepithema humile
GeneLH13853
Positionscf7180001004715:6360054..6363909[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH13853
sequence mRNA:
>LH13853-RA
ATTTGGGCTATTGAAGAGCTTGACAAGTTTGCCATGAGCGGAGATCTAGGATTAGTGCTTAAGAGCAAAGCTAGACACGC
TGCTATCTCTACTTTATTAGCTAAGCCATTTTATTTTGAAGACAAACCCTTAATTGTACAATATGAAGTTAATTTCCAAC
AAGGACAGGAATGCGGTGGTGCCTATCTCAAATTGCTTACGTTAGATGATAACTATGGAGACTTGAAACAGTTCCATGAT
AAAACACCATATACTATAATGTTCGGGCCTGATATATGTGGCAAGGATCACAAGGTATTAACATATGTACTTTATCTTAT
CTCAAGCTCGTTGTTAGACGATTTTATTCCTCCAATAAATCCGCCTCTGGAGATAGAAGATCCCGAGGATAAGCAGCCTG
AGGATTGGGATGACAGAGAAAAGATTCCCGACCCATTGGCGGAAAAGCCTGAAGATTGGGACGAAGATGCTCCGGCGCAG
ATAGTCGATGAGACGGACATTATGCCTGAGGGATGGCTCGAGGATGAACCGCCTACGATACCGAATCCGGATTCTGTCAA
GCCCGACGATTGGGACGTTGAGATGGACGGAGAATGGGAAGCTCCGGAAATACCGAATCCAAAATGCGCGGAAGCTCCTG
GCTGCGGCCCGTATAAGCAGAAAATGAAGAAAAATCCGCGATACAAAGGCAAATGGCTGCCGCCCCTCGTCAACAATCCT
AATTACAAGGGAAAATGGAAGCCTAGACTCGTACACAATCCCGATTATTTCAACGACGAGAATCCATTTAAGATGTTACC
AATTAGCGCCATCGGTTTTGAGCTATGGTCAATGTCTCCCAACATATACTTCGACAATATAATTATAGCGGATGATGTGG
AGGTTGCGAAGAAATGGGCGGATGACAGTTTTGAGATTCGGCGTGCTAAAATCGCTGAAGAAACCGATTCTTTATGGGGT
CAAATGATGAAAGCGATGAATTATAAACCAGGCTGGTGGGCTCTATATTTCGTGTATTGTGCGATACCAGTTGTAGCTTA
CATCTGGTATTTGTGCAAACGAGCTTGTGAGAGTGAAACGGACTTCAATGAAGAAGAGGAAAGATCTCCTTTCGGAATAA
GCAGCGAGATCAGAGAGAAAGAAAATGCGGAGAACGAAAATCAGGAATCTTTAAATCCCGAACTTGCCACGCAAGAATCT
GCCATAGATCTAGAAGACGCAGAGAAAGAGACTGCAACGGAGGAAGTAATCGATATTGATAAGGAGGATAAGGAGGATAA
GAATGCATCACTGATCAGTGAGGAAGGACCACGACGAAGAAAACCAAATAAAGAATAGTAAAAGGAAAGAATTATTAAGA
AAGAAATTATTATTGCTGATATTTATGTAATATTGTCACATTCCACATTACACTTGCCACTGTGGATAGTAGGGTTACCA
GACACTAGCAAATCCAGTCACTGCAATGTGATCGATAGTATTTAATTCCTTCGTCTAAGGACACTGACGATTCGACTTCG
TATATAAACTTTCATTATGCATTTGGGGAAACTATTCTCAAATTACATGCGCTTTCATGTAATGAATGATGTATGATGCA
TCTGTACTTGAAAATTTGCAAGAGTGCTGTCCATCATGACGGACAATACCTTAAAACATATTTATGTGTATGTTTTCTTT
TCGTTATGACATCGTAAAATATCGTAGCGTTAAAGAGTAACGTGTCCGTTTTACTCAGTTTAATGTGTCACAGTCGGATA
TAAATTAGAGATAGCAAGGACGTCAATGAGTTATGAATGTAATATGTGAGTGCAAAAGGATTTGTAATTTATATACATAT
CCTGATGTGTTGCAAAGTCGATTTTATAAGATTCAATGATTATAGTATTCTTCAACTACTATGGTGGAGTCAAATCAATT
ACTCAGATCGTGCAAAAGCAGTTCCCGTGATTTTTTTTTAAACAAAAATGTATAATAAAAATAAATATTCCTTTTAAAAG
GCAGCGACGTGAAACACAACAGCATTTATTAAACTACCATAGCAGTTGATAATCGATAGTTAATAATTTATCTTTCTCAT
GAATTATTTGATGTAATATTCACGAACTTTAATGTTACTGCGTTATTTAAGTTAAGAATAAATCTATATGGTATATATTA
A
PEP:
>LH13853-PA
MSGDLGLVLKSKARHAAISTLLAKPFYFEDKPLIVQYEVNFQQGQECGGAYLKLLTLDDNYGDLKQFHDKTPYTIMFGPD
ICGKDHKVLTYVLYLISSSLLDDFIPPINPPLEIEDPEDKQPEDWDDREKIPDPLAEKPEDWDEDAPAQIVDETDIMPEG
WLEDEPPTIPNPDSVKPDDWDVEMDGEWEAPEIPNPKCAEAPGCGPYKQKMKKNPRYKGKWLPPLVNNPNYKGKWKPRLV
HNPDYFNDENPFKMLPISAIGFELWSMSPNIYFDNIIIADDVEVAKKWADDSFEIRRAKIAEETDSLWGQMMKAMNYKPG
WWALYFVYCAIPVVAYIWYLCKRACESETDFNEEEERSPFGISSEIREKENAENENQESLNPELATQESAIDLEDAEKET
ATEEVIDIDKEDKEDKNASLISEEGPRRRKPNKE
Swiss-ProtCalnexin
KEGG     K08054  CANX; calnexin     
SUPERFAMILYSSF49899  Concanavalin A-like lectins/glucanases superfamily     
Gene3DG3DSA:2.60.120.200     
PfamPF00262  Calreticulin; Calreticulin family     
PRINTSPR00626     
ProSitePatternsPS00803  CALRETICULIN_1; Calreticulin family signature 1.     
OrthologiGroup-00936    Calnexin      

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