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Gene detail [Fasta]

Species Linepithema humile
GeneLH13837
Positionscf7180001004715:6225998..6228523[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH13837
sequence mRNA: 
>LH13837-RA
ATGCGTCTTATCAGTGCTGAAAAACTAAGCAAAATTCAAAGCGACGCCACACGTATCAGAAACATATGTATTCTGGCACA
TGTGGATCATGGGAAAACTACCCTAGCGGATTCTCTTGTTGCGAGCAATGGCATCATTTCTAACAAATTGGCTGGCAAGC
TGCGATATCTGGACAGCAGAGAGGATGAACAGTTACGCGGGATCACAATGAAATCCAGCTCCATCACGCTGTATCACTTA
CACAACGAAGCAGACTATGTGATAAATTTGATTGATTCACCAGGCCATGTAGATTTCTCCTCTGAGGTGTCGACTGCCGT
CAGACTCTCCGATGGAGCGATAATTTTAGTTGATGTGGTGGAAGGTGTATGTCCTCAGACACGTAGCGCCCTATCAATAT
CTTATGTGGAGGGATTGAAACCTATTTTAGTACTTAATAAAATTGACAGATTGATCACGGAAATGAAATTGACGCCGTTG
GATGCCTACGTTCGTTTAACGCAAGTCTTGGAACAAGTAAATGCCATCACGGGCGAGTTATTTGCGAGCGACGTGATGGA
ACGCGAAGATCGAGAGGAAACAGTCACAATTACAGCGGACAAGGCAAATAAGAGAGACCTGGCTGATTGGCAGTCGGTGT
TGGAAGAGATAGACGATTCGAATTTATATTTTTCTCCGGAACAAGGAAACGTTCTTTTCACTAGCGCAATCGACGGCTGG
GGCTTTGGTATAAAGGAATTTGCTAAAATCTATTCGAACAAGCTGGGATTCAGCGAGAAGGTGCTGCGTAAAACATTGTG
GGGGGACTTTTATATAAACAATAAGACAAAGAGGATCATGAAGGGTGCTCAAGAGAAGGCCAAGAAGCCACTTTTTGTAC
AATTAATTTTAGAAAATATTTGGGTATTATACGAGACCATAGTGGTACGAAAAGATAAGGAAAAATTACCGATTATGGCT
GAGAAGTTAAATATCAAATTAACAACGCGAGACTTGAGACACACCGATTCGAAAGCACAGTTACAGGCCGTTTGCTCGCA
GTGGCTTCCGTTAGCGCAAACTTGTCTGGATATGGTATGCGAAAAGGTACCGGCGCCGCATAATTTGACTGACGAAAAAA
TCGAACGATTGATAAGCGGAAATAACGACTTCTCTGCTTTACCTCCCGAAACGCAGCGACTGAAAGCGGCGTTCTTGGCG
TGCGACCCGTCGCCGGACGTACCGATTATAGTATTTATATCGAAAATGTTTCCAGCGGAGAAAGACATGTTGCCTGAGAA
TAGACCGAAATCCTTAACATCCGAGGAACTGGCGCAGAGAAGAGAAGTCGTTCGACAGAAGCATGCGGAGCACTTGCAGA
AAATCATCGAGAATCACGAGGTGAACACGTGCGATATGATTGATAACGACCTCAATAACGACGAAGATGTGAAGCACGAG
GACGTCGACGACGACGAGTCGGACGGCACATTAATAGCCATCGCCAGGGTGTATTCGGGAACTTTGAAAACCGGAGACGA
GGTGTTCGTTTTAGGGCCGAAGCACAATCCTGCCGTCGCCTTGGAACGCGAGAAGGCGGGCGAGGAGGTGGATCCGTCGA
TCGTGCTTAAGGACTTGAAACCCGGCAGACACATCACGAGGGTGACCGTCGACAAACTGTACATTCTCATGGGACGAGAG
CTCGAAGCCGTGAGCGAAGTGCCGGCGGGTAATGTCTTCGGCATAGGCCGTCTGGAGGAGCACGTGCTGAAGACCGCGAC
TCTCTCCACGACAATCGCCTGTCCCTCGTTCACGGAACTGACCTCTCTCGCGGTTCCCATCCTAAGGGTGGCGCTAGAAC
CGAAACATCCGAACGAATTACCGAAGCTGATCAACGGTCTGAAACTGTTGAACCAAGCGGACGCCTGCGCCATCGTTCAC
ATACAAGAGAACGGCGAAGTCGTCTTGAGCACCGCCGGCGAAATACATCTGGAGAGATGCCTGGAGGACCTGAAGCTGCG
TTACGCAAAGGTCGACGTCAACGTGTCGGAGCCGATCGTGCCGTTCCGCGAGACCATAGTGCCGCCTCCGAAGCTTGACA
TGGTGAACGAGGCGATCGAGAAGAAAGCGGAAGGCGCCAGCCTCGAGATCTGGACGTCGAATCGGCAATGCCGCTTCGAG
ATCGACGCGCAACCGCTACCTGAAAAAGTCACGAAATTACTGGAGGAGAATGCGAACTTGATAAAACTGTTGGACAGCTG
CTGCGACAGATGTACGGAGGAAAATGGGGAGCACGAGGATTTTTCTGCTGAGAATCAACTGAACGAAAGATCCATGTCCG
ACAAGAAGCTGAAGGAAGCAAAAGTATTTAAAAGCGAATTGGAAGCGGCTTTCGTCGAGGCGGGATGGAAGGAGAATACA
TTGGATCAAATATGGTCTTTCGGACCTCGCAAGTGCGGACCTAATATTTTGTTGAACAAGACTGACTACGAGCAGAAGAA
GTTTTGGGAACAGCAAGACGTAACCGACGATTCTCGTACGATGTAA
PEP: 
>LH13837-PA
MRLISAEKLSKIQSDATRIRNICILAHVDHGKTTLADSLVASNGIISNKLAGKLRYLDSREDEQLRGITMKSSSITLYHL
HNEADYVINLIDSPGHVDFSSEVSTAVRLSDGAIILVDVVEGVCPQTRSALSISYVEGLKPILVLNKIDRLITEMKLTPL
DAYVRLTQVLEQVNAITGELFASDVMEREDREETVTITADKANKRDLADWQSVLEEIDDSNLYFSPEQGNVLFTSAIDGW
GFGIKEFAKIYSNKLGFSEKVLRKTLWGDFYINNKTKRIMKGAQEKAKKPLFVQLILENIWVLYETIVVRKDKEKLPIMA
EKLNIKLTTRDLRHTDSKAQLQAVCSQWLPLAQTCLDMVCEKVPAPHNLTDEKIERLISGNNDFSALPPETQRLKAAFLA
CDPSPDVPIIVFISKMFPAEKDMLPENRPKSLTSEELAQRREVVRQKHAEHLQKIIENHEVNTCDMIDNDLNNDEDVKHE
DVDDDESDGTLIAIARVYSGTLKTGDEVFVLGPKHNPAVALEREKAGEEVDPSIVLKDLKPGRHITRVTVDKLYILMGRE
LEAVSEVPAGNVFGIGRLEEHVLKTATLSTTIACPSFTELTSLAVPILRVALEPKHPNELPKLINGLKLLNQADACAIVH
IQENGEVVLSTAGEIHLERCLEDLKLRYAKVDVNVSEPIVPFRETIVPPPKLDMVNEAIEKKAEGASLEIWTSNRQCRFE
IDAQPLPEKVTKLLEENANLIKLLDSCCDRCTEENGEHEDFSAENQLNERSMSDKKLKEAKVFKSELEAAFVEAGWKENT
LDQIWSFGPRKCGPNILLNKTDYEQKKFWEQQDVTDDSRTM
Swiss-ProtElongation factor Tu GTP-binding domain-containing protein 1
KEGG     K14536  RIA1; ribosome assembly protein 1 [EC:3.6.5.-]     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.90.1430.10     
PfamPF03144  GTP_EFTU_D2; Elongation factor Tu domain 2     
PRINTSPR00315     
TIGRFAMTIGR00231     
OrthologiGroup-00074    Elongation factor Tu GTP-binding domain-containing protein     

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