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Gene detail [Fasta]

Species Linepithema humile
GeneLH13830
Positionscf7180001004715:6114672..6117950[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH13830
sequence mRNA: 
>LH13830-RA
ATGATGTCCTTCATGGGAAAGTTGCTGTTTTCCCTTCCTGTGTTCCTGGCTCTTCTGGCGTACGGATCAACTGATCAAAA
GCCAAGGCTGGTGTGTTACTTCAGCAATTGGGCTATATATCGTCCGGACGTAGGCAGCTATGGCATCGACGACATTCCCG
CTGAAATGTGCACGCACGTTATCTACTCCTTCATCGGCGTGAGCAACGTTACTTGGGACGTGCTCATTCTCGACGAGGAG
CTCGACGTCCAGAAGGGCGGCTTCAACAAGTTCGTCGCTCTAAAAGAAAAGTATCCGCACTTGAAGACTCAGATCGCTAT
CGGCGGTTGGGCCGAAGGCGGCAGAAAATACAGCGCAATGGTCAGCTCGAAACCCAGACGTGACTCACTCATCAGCGGCA
TCGTCGCTTTCATGAATCAGTACGGATTCGACGGCTTCGATCTTGATTGGGAATATCCGGCTGCTACGGATAGAGGCGGC
ACTTTTAGCGACAAGAACAACTTCTTCTACTTCGTCGAAGAGCTGAGGACCGCGTTCGACAAGGCAGGCAAAGGCTGGGA
GATCACTATGGCGGTGCCGATGGCCACGTTTCGTCTTAACGAGGGATACCACGTACCAGAATTATGCGAGCAAGTTCCTT
CGCTTATTGATGCCATCCACGTGATGTCTTACGATCTTCGTGGCAACTGGGGTGGATTCGCCGACGTCCATAGTCCACTT
TACAGAAGACCTCACGATCAGTACGCCTATGAAAAATTGAATGTGCACGATGGTCTCCAATTGTGGGAAGACAAGGGTTG
CCCCGCCAACAAGCTCGTCGTAGGAATCCCGCTGTACGGACGCACCTTCACCCTCAGCCAGGGCAACAAGGACTACAAAC
CCGGAACTTATATCAACAAAGAAGCCGGTGGCGGTGCGCCCGGCAAGTACACCGCAGCTAAAGGATTCTTGGCTTACTAC
GAAATCTGTATGGAACTTATGAAACCGGACAACGGATGGACCAAGGCATACGACGACAAAGGCTTGGTGCCCTACATGTA
CAAAGACACTCAATGGGTCGGCTACGAGGATGCTGATAGCATCGTCCACAAGATGAACTTCCTGAAGGAAAAGAAATATC
TCGGTGCCATGGTCTGGGCCGTCGACATGGACGATTTCAGAGGACTTTGCGGTCCTGCGAATCCTCTCATGACTACTATC
TACGAAGGCCTGAAGGGTTACACAGTCACAGAGAAAAATTACAAAACCACACCCAGACCCGAATGGGACAGGCCGCCTAG
CACTCCATCCTCCACGGGTGAAGAGAAACCAAAACCGACATCGAGACCCGAACCCGAGCCGACCAAGAGACCCGGAGAAT
CTACCGAGCCACCTCGTCCTACCTCGAAACCAGTCGATGACGACGAAGTGAGCTGCAACGGACCGAACATCATCCCCAGC
AAGGATTGTCGAACATACTACGTTTGCAATCACGGTAAACCAATTAAGACGCAATGCGCGCCCGGTTTGATCTTCAATAG
CTCCAAGCTCATCTGCGACTGGCCGGCCAACGCCGATCGCGTGGAATGCAGAAACGGCTGATCTACGTGTGATTTCGATA
TCGATTTTACAAGCCCAGTGGTTTCCATCAATTCATATATCTCTCGGTTCTACAAGAGAGTTCATTACGATAATTTCATA
TGACGGTACGTCGTTACGTTATTACTTGTTGTGTCGTGCGCGAGAACATGTGCGATGTGAAATGATATCGCTGCGAGCCA
CAATAAATCATACGCAGTTCATTAAAA
PEP: 
>LH13830-PA
MMSFMGKLLFSLPVFLALLAYGSTDQKPRLVCYFSNWAIYRPDVGSYGIDDIPAEMCTHVIYSFIGVSNVTWDVLILDEE
LDVQKGGFNKFVALKEKYPHLKTQIAIGGWAEGGRKYSAMVSSKPRRDSLISGIVAFMNQYGFDGFDLDWEYPAATDRGG
TFSDKNNFFYFVEELRTAFDKAGKGWEITMAVPMATFRLNEGYHVPELCEQVPSLIDAIHVMSYDLRGNWGGFADVHSPL
YRRPHDQYAYEKLNVHDGLQLWEDKGCPANKLVVGIPLYGRTFTLSQGNKDYKPGTYINKEAGGGAPGKYTAAKGFLAYY
EICMELMKPDNGWTKAYDDKGLVPYMYKDTQWVGYEDADSIVHKMNFLKEKKYLGAMVWAVDMDDFRGLCGPANPLMTTI
YEGLKGYTVTEKNYKTTPRPEWDRPPSTPSSTGEEKPKPTSRPEPEPTKRPGESTEPPRPTSKPVDDDEVSCNGPNIIPS
KDCRTYYVCNHGKPIKTQCAPGLIFNSSKLICDWPANADRVECRNG
Swiss-ProtEndochitinase
KEGG     K01183  E3.2.1.14; chitinase [EC:3.2.1.14]     
SUPERFAMILYSSF51445  (Trans)glycosidases superfamily     
Gene3DG3DSA:3.20.20.80     
PfamPF00704  Glyco_hydro_18; Glycosyl hydrolases family 18     
SMARTSM00494     
ProSiteProfilesPS50940  CHIT_BIND_II; Chitin-binding type-2 domain profile.     
ProSitePatternsPS01095  CHITINASE_18; Chitinases family 18 active site.     

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