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Gene detail [Fasta]

Species Linepithema humile
GeneLH13711
Positionscf7180001004715:3423047..3433614[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH13711
sequence mRNA:
>LH13711-RA
ATGCAGTCTTTTGGCGATGATACGCTGCTGGCTTGTATAAGTATTGAAAAGAAGCATGGAATCTTACAAGAACAAAACGG
AGATAAAGTACTGCAGGAAGAAAACGATAGTGATTTAGGTAAATATTTTAAACAGAGCTTATTGCTTTCGGAGTTTGTGA
ACAAGGACGATGATGTCGATAAGTCAAAAGTGTCACGTCCCGCGCACAGTACAAAAAGAAGAGCGGAGGAAAATAAATCA
GATTTTGTAAAATATTGCGAGGACATACATTCGAAACCCGATGACGGAAAACATTTTCCTTCAACATCAATTGTTATCAT
TTTTCAGAAATACCTTGCTCATGGAGTAGACTGTATGTTTCCATGGCAAATGGAGTGCTTGTCAATTCATCCAGTGATGC
AAGAAAGAAAGAATCTTGTATATTCCGCACCTACATCTGCAGGAAAAACTCTTGTTGCTGAAATTTTGCTGATTAAGACT
GTAATAGAAAGGAAGAAGAAATTGTTAGAGAAAAGATGTATTACTTCCAGACACAAAATATTTCTTATAGTAGTTGATAA
ATTTGACATGCAGGATTTATTGTCTGACATTGGAATAAGAGTGGAGGGATTTATGGGAGGAATGGCACCATCTGGAGGAT
TTGCTGCTACACATGTTGCAATAGCCACTATAGAGAAGGCAAATTCTTTGGTGAATCGTTTAATGGAGGAGAATGACTTG
AGTAGCTTAGGAGCTGTGATAATAGATGAATTGCATCTACTTGGTGATCCCAATCGTGGTTACCTTTTGGAATTGCTTTT
AACAAAATTAAAATACATGACTATTCGTAATGATGACATCAATATACAGCTGATAGGCATGTCAGCCACATTGCCAAACT
TAACTTTGTTAGCCAAATGGCTAAATGCAGAATTATATAAAACTGAATTTCGTCCTATTCCTCTGAATGAATGCTGTAAG
ATAGGAGCAAATATATATGACAACAAATTGAATCTTGTCAGAACATTAGCAGAATTAGCAGAATTAGGAACAGATGTAGA
TAATATTCTACAGCTTTGCATCGAGACGATAAGCTCTGGTCATAGCGTCTTGATTTTCTGTCCTACAAAGAAATGGTGTG
AAAAATTAGCAGAGCAAATTGCTACAACTTTCTTCAAGTTAGGTTCTGAAAATACAACGCTAGGAGAAATGTTGAAGAAA
GAAATCAGCTCTACATTAATCCATGAAACTTTAGAACAATTAAAACGGAGTCCAAGTGGTCTGGACAATATTTTAAAGAA
CACGATTTCATTTGGCATTGCGTTTCATCATGCTGGACTTACTATGGATGAGCGTGATATCATAGAAGGAGCTTTCAGAA
CAGGGTCCTTGAGAGTCCTTATTGCTACGTCAACATTAAGCAGCGGAGTGAACTTACCTGCGCGAAGAGTAATCATAAGA
TCTCCTTTATTTGGTCGCAGTTTGTTAAATACTTTAGCTTACAAACAGATGATAGGACGTGCAGGCCGCATGGGGAAAGA
TACTGCAGGAGAAAGCATATTAATATGCAAGCCAAACGAACGTAATTCAGCTGCATCATTGCTCTCCGCAACTCTGGATC
CAATTGAATCTTGTCTCAATGATTCCACTCTGTTAATAAGAGCACTCTTAGAAGCAGTAGCTAGTGAAGTTTTGTATACA
GTGGAAGATCTAGAACTGTATATTAGTTGTACTTTGTTAAGCTTGAGCGATGAGTCTGATGTACGGATTTTTTCTAACGA
GGCGATGAAATTCCTGTTGGACAATGAATTTTTATTATTACAAACTACAGAACGAGAATCTAGATGGATAGCAACGGCCC
TTGGGAAAGCATGCTTGGCAGCGTCTGTGCCTCCTAGAGAAGGATTATTTCTGTTTGAAGAACTGCAGAAAGCAAGACGA
TGTTTTGTTTTGGACACGGAATTGCATGTGATATATTTGGTGACCCCACTGTCTTCCGGATGTCAGATTGGAAATGTCGA
TTGGATGACGTTTCACGAATTATGGAATACCATGTCGGAAAGCGAGCGCAGAGTTGGGAAACTTGTTGGAGTGGAAGAAC
GTTTTCTGATGTCGGCTATCAGAGGAATTGTTAAACCTGGAAAATTGTTGAACATACATAGACGATTCTATAGTGCATTA
GCGCTGCATGATTTGGTTAAAGAGGTCCCACTTAATGCAGTCTGCAAGAAGTACGGATGTTGTCGCGGAGTATTGCAATC
TTTACAACAGTCTGCTGCTACATATGCGGGTATGGTCACACAATTTTGCAAACAGCTAGGGTGGGATTGCATGGAATTAT
TGGTCAGTCAATTTCAAACAAGATTGCAATTTGGCGTCTGCAGAGAGCTGCTAGATTTGCTGCGTCTACCGATGTTAAAT
GGGTTGCGAGCAAGAAGTTTGTATAAGCAAGGAATAACATGCGTAGCAGACTTGGCTGTTGCTAATGAACTTAATGTCGA
ACGTGCGCTCTATAATGCTCTGCCTTTTGAAAGTGAGAAAGAATACGAAGGAGAATATGCACTTGAAGCCGAAAAAAGAA
ATAAAATAAGGACGGTGTTTGTAACTGGAAGAGATGGCCTCACGCCCCAACAAGCTGCGATTTTATTGGTTCAAGAAGCA
CGGATGTTAGTTCAGAAAGAATTAGGACTCGAGCAATTGCAATGGGAGCAAAACGAGCAGTCTTTGCAAGTAAATACACA
TATTGGAGAAAATATTGAAAATACGCCCAATACGAAAGTACAAATTCGAACGGAATTGGATATAAAAAATTCAAAATCTC
CAAAAATAGAAATATTCATAGAAAACTCAGTACACGAAAAACCTGCCAGTAACGAAAATAAAAAAAATGACAATCCGAGA
TCTGATACGTGTAAAGAAACCAAGGTTTCCAATAAGAAGAACACGATTGAATCAAACAATCGGGATTTAGATAAAGTTAA
TTTATCTAAAATTGCAGATGATGATAAAAATTCGTCTTTCTTGCTAGATTTAAGTTCTTCTGATATAATAGCGAACGATG
AACAATTATATACTCCTAATAAAAAGAAAAACTTGTTTGAAACTGATAGTAAGATAAAGAGAAGTAGCAAATGTTTAAAG
AAACTCAGTCTGGAAGTTAATGATGTACCTCCCAAAAAATTAAAGATTTCCAGCCCAAATGAGATAAAAAATAACGATGA
GAGTTTAATAGATAAAAACGTAAGCTTATCTATTATAAATATAGATATTAAATCGTCATATTCAATAAGTCCCAATCTGT
TTGACGACAGTTTGAATCTTGACTCCCAAATGTGCGACATTCTCGAACAAAATGTTATGGATATCGCGCATTTATCGGGC
TTAGAAGATTCTAAGACGTTCGCAAACGAATTGAACACAGCAAATGCGATACAGGTAAACAATGATAAAGATGTACAGAA
AAAATGTACAAATCCGAATAGTGATAATGCGCAAATCTGCAAAGAAAATAAGGTGAACAGTGTAGATGCAACAAATTTAC
AATCGAAACACAGCGTATTGTCATGGGGCGACGATTCGTGGAATTATTCCGAAGTGTTGCTAAAGCAAATAGCTCAAGAT
AACGATCAAAATATCAGGAAGGAAGTATGTAAACCGGAAGTTAAAGATGTTGTAAATATAAATGCGCCCACTACGCCAAA
AAAAGCGAAAACTTGTGCGCAAAGCGATAATGAAAGGGTGTATAAAACGGATGTTAAAAAATCGACTGCTGCAGTTAATA
AGAAGACACTACGGAAATTTAATTTACTGAAAACAGCGGATGTGGAATCTCCCGTGGCAAACGTAATCGTGTTCAGTAAC
GAACGAAGAATATCAGTGGATTCAATAAAACCGATTCGGAAGATATCATTGTTAGTTCACAGCACACTGTGGAATCCCCG
TTTAGCAATAACAAAAGTCGGACAAGGACGCAGTTGGAGAAAATACGTAAAATGCGTTCTCAAAAACTCACCGAAGATTT
CACAACGGAATGCGGAAATGCCGAGTGACTTAATGAAAGATAAAACTAAGCAGAAAGTGAAGCCAAAGTTAAAGAATATT
TTAACACGAAATCTGTTATTCGCTGCAAATCACAGTGCAGACAGTATTGCGACGAAACAACGTGAAACAGAGTCGAATAT
CTGTAGCAAAAGCACGAAATCGAAAATAGAAATCACGCTGCAACCAGATAGCAAAAAAGATTTGAGTGAAACGACAGATT
GGAATACGTTGAACATCGTGAAAGTTGCGAACAACAGAGCAACTTTTAATCTGTTCAAACGCGAAGTATTAAAAAAGAGA
TATATTGCATTGGCCTTGCATTGCGATGTATATGTGAATAGTACGAATAAAATAGGCTCGAAGATTTGTGCTTCCGACAC
GGGAAAACGAAAGTCCAGACGGTCGGGAAGCTATGCGCACGGAAATAAAGAAATTCGCGGTGTTGCGATATCCTGGGAAA
GCAATATTGCGTATTATATCTCATTTAGCAATTCACAAGAATCAAAGGTTTCTGGGAAAGAACAAATAGCTCTGTTGAAA
GAGTTGTTTTCCGATACATCTTTGTACATGAAATGCTTCGCGATAAAGGATATTTATAAACTCTTGTATCAATGCTGTGG
AATCTCCGCCAAATGCAGATTTCTTGATCCAATAATCGCACATTGGTTGTATACCAACGATTCCGAAAGAAATTTTAATG
AAATGGTGACACAATACTTTCCCCAAGGAAATTTCATAATGAAACGTACAAATTCTTATTATAATGCGGGACCCGGGATG
GATGTGCAAAGTTCTTTACCAGGCGAGTTCAGATCAGCGGCAGAAGCTGTGCTTACATGGCACATGATGGATAATGTTAT
GAGTAAATTAGAAGAACTTAATCCCGTTCTACTTCATACATTTAGAGGTAATAGAGATTCTATAATAGATGAACATCTTC
TCCTCTCGCAGTGCACTCACCGATATTTGTGTTTACTTTCAGAAGTAGAAATGAGAATCGTAACAATTTTAGCTTGTATG
GAATTATCAGGCATTGCTGTGAGTTTAAAGTCGTTACAAGAGCTATCATCAGTTATCTCAAACGAAATGCAGTCTTTGGA
AACAAAAGCTTACGATTCGGCAGGTAGGAAATTTAATTTCTCATCGTCCAAGGAAGTTGGCCAGGTGTTAGGGTTGTATA
AAGACAAGAAAGTCAGCACAAGTAAAGCCGTTTTGGAAAAATGTGATCATCCGATATCGAACCTCGTAATTTTATGGCGG
AAATTAAGTGCGACAAAAACCAAGAAAAAGATCGTCTATCCTTTATTAAAACTGGCTCAAGGAGACTCTCGTATTCATGG
TAATTGTATCACTTGTACAGTGACAGGAAGAGTCTCGATGTACGAACCAAATTTGCAAAATGTACCAAAGGATTTTAGTT
GCGCAGATAATAATTTCGTCGTAAGTGTAAGAATGGCGTTTGTGCCGTCTTTGGGTAATATAATGCTGTCCGCTGACTAT
TGCCAACTCGAATTGCGCCTCTTGACTCACTTTTCTCAAGATTCTGTACTATGCGAAATTATGAGGCAACAAGGTGACAT
CTTTAAAAGTATCGCTGCAAAATGGAATAATGTAACAGAAGAAAAGGTAACCAATGAAATGCGTCAACGTACCAAGCAAT
TATGTTACGGCATGATTTATGGCATGGGAGTGAAGTCACTAGCTGAAAATCTGTGTGTAAGCGAATCCGAAGCTCAAGGC
TTCTTAGAATGTTTTATGAACGCGTATCCTGGCATATATAAATGGCTAAACGATGTGCTCGAAGAAGCGCATCGTGATGG
ATATGTGACGACCTTACTCGGAAGACGCAGAGAGCTTCCGGATTTAAACAGTACAAAATCATCTACCAGAGCAGATATCG
TCAAGAAAGCCATGATAAGTATAGAAGACAGAATAAGGTGTAGCTTCTCAGATTCAGCAATGATATTTCCAGAGGTGAAT
ACCACGCGCAAACTGCGAAGCAATTTGCAACAAAGAGGGGGTTATCTAGTTTTACAATTACATGATGAATTATTATATGA
AATAAATTTAGCAGATCTGAAAGAAGTTGCTGCAATAATCAAAGAATCAATGGAAAATGTATGCCAGCTTACCGTGCCAT
TGCCTGTAAAACTCAGGAGTTTCTCACCCTTGAATATCTTGGGCACGGAATCTTCACCAAACATCTCCTGCAGCATTTCT
ATAAGACACTCCTTAAAGTGCATCCTGTCCATTTTGGTGGGCGCAGGTAACATTTTCGGCGACTGGTCCATTATCTCGGC
CTGCAGTATCGCCGTGAGAACGGAATCGGCATACATATCGTTCACCGGCGTCGCTATCCATTCCATCGTAACGATTTTGC
CGTCGATCGTAACGTCGACGTTCTTGAACACCCTCAGCTTCTTGTCGTCTATAACTTCCAGGCTGCCAGCTATTTGTGTT
AGCAGATGCTTCAGTACGGGCAACGACGCGGAGAAGTACACGCTCTGCCGCTGTATTACCTGA
PEP:
>LH13711-PA
MQSFGDDTLLACISIEKKHGILQEQNGDKVLQEENDSDLGKYFKQSLLLSEFVNKDDDVDKSKVSRPAHSTKRRAEENKS
DFVKYCEDIHSKPDDGKHFPSTSIVIIFQKYLAHGVDCMFPWQMECLSIHPVMQERKNLVYSAPTSAGKTLVAEILLIKT
VIERKKKLLEKRCITSRHKIFLIVVDKFDMQDLLSDIGIRVEGFMGGMAPSGGFAATHVAIATIEKANSLVNRLMEENDL
SSLGAVIIDELHLLGDPNRGYLLELLLTKLKYMTIRNDDINIQLIGMSATLPNLTLLAKWLNAELYKTEFRPIPLNECCK
IGANIYDNKLNLVRTLAELAELGTDVDNILQLCIETISSGHSVLIFCPTKKWCEKLAEQIATTFFKLGSENTTLGEMLKK
EISSTLIHETLEQLKRSPSGLDNILKNTISFGIAFHHAGLTMDERDIIEGAFRTGSLRVLIATSTLSSGVNLPARRVIIR
SPLFGRSLLNTLAYKQMIGRAGRMGKDTAGESILICKPNERNSAASLLSATLDPIESCLNDSTLLIRALLEAVASEVLYT
VEDLELYISCTLLSLSDESDVRIFSNEAMKFLLDNEFLLLQTTERESRWIATALGKACLAASVPPREGLFLFEELQKARR
CFVLDTELHVIYLVTPLSSGCQIGNVDWMTFHELWNTMSESERRVGKLVGVEERFLMSAIRGIVKPGKLLNIHRRFYSAL
ALHDLVKEVPLNAVCKKYGCCRGVLQSLQQSAATYAGMVTQFCKQLGWDCMELLVSQFQTRLQFGVCRELLDLLRLPMLN
GLRARSLYKQGITCVADLAVANELNVERALYNALPFESEKEYEGEYALEAEKRNKIRTVFVTGRDGLTPQQAAILLVQEA
RMLVQKELGLEQLQWEQNEQSLQVNTHIGENIENTPNTKVQIRTELDIKNSKSPKIEIFIENSVHEKPASNENKKNDNPR
SDTCKETKVSNKKNTIESNNRDLDKVNLSKIADDDKNSSFLLDLSSSDIIANDEQLYTPNKKKNLFETDSKIKRSSKCLK
KLSLEVNDVPPKKLKISSPNEIKNNDESLIDKNVSLSIINIDIKSSYSISPNLFDDSLNLDSQMCDILEQNVMDIAHLSG
LEDSKTFANELNTANAIQVNNDKDVQKKCTNPNSDNAQICKENKVNSVDATNLQSKHSVLSWGDDSWNYSEVLLKQIAQD
NDQNIRKEVCKPEVKDVVNINAPTTPKKAKTCAQSDNERVYKTDVKKSTAAVNKKTLRKFNLLKTADVESPVANVIVFSN
ERRISVDSIKPIRKISLLVHSTLWNPRLAITKVGQGRSWRKYVKCVLKNSPKISQRNAEMPSDLMKDKTKQKVKPKLKNI
LTRNLLFAANHSADSIATKQRETESNICSKSTKSKIEITLQPDSKKDLSETTDWNTLNIVKVANNRATFNLFKREVLKKR
YIALALHCDVYVNSTNKIGSKICASDTGKRKSRRSGSYAHGNKEIRGVAISWESNIAYYISFSNSQESKVSGKEQIALLK
ELFSDTSLYMKCFAIKDIYKLLYQCCGISAKCRFLDPIIAHWLYTNDSERNFNEMVTQYFPQGNFIMKRTNSYYNAGPGM
DVQSSLPGEFRSAAEAVLTWHMMDNVMSKLEELNPVLLHTFRGNRDSIIDEHLLLSQCTHRYLCLLSEVEMRIVTILACM
ELSGIAVSLKSLQELSSVISNEMQSLETKAYDSAGRKFNFSSSKEVGQVLGLYKDKKVSTSKAVLEKCDHPISNLVILWR
KLSATKTKKKIVYPLLKLAQGDSRIHGNCITCTVTGRVSMYEPNLQNVPKDFSCADNNFVVSVRMAFVPSLGNIMLSADY
CQLELRLLTHFSQDSVLCEIMRQQGDIFKSIAAKWNNVTEEKVTNEMRQRTKQLCYGMIYGMGVKSLAENLCVSESEAQG
FLECFMNAYPGIYKWLNDVLEEAHRDGYVTTLLGRRRELPDLNSTKSSTRADIVKKAMISIEDRIRCSFSDSAMIFPEVN
TTRKLRSNLQQRGGYLVLQLHDELLYEINLADLKEVAAIIKESMENVCQLTVPLPVKLRSFSPLNILGTESSPNISCSIS
IRHSLKCILSILVGAGNIFGDWSIISACSIAVRTESAYISFTGVAIHSIVTILPSIVTSTFLNTLSFLSSITSRLPAICV
SRCFSTGNDAEKYTLCRCIT
Swiss-ProtDNA polymerase theta
KEGG     K02349     
SUPERFAMILYSSF158702  Sec63 N-terminal domain-like superfamily     
Gene3DG3DSA:3.30.70.370     
PfamPF00476  DNA_pol_A; DNA polymerase family A     
SMARTSM00490     
ProSiteProfilesPS51194  HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile.     
PRINTSPR00868     
CoilsCoil
OrthologiGroup-00410    DNA polymerase theta      

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