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Gene detail [Fasta]

Species Linepithema humile
GeneLH10649
Positionscf7180001004243:10496..15331[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH10649
sequence mRNA: 
>LH10649-RA
AACTTTGCAATAAGATATAATTTATAAAAAACTTTAAATTCGTAATATGTCGAGCGGATTTGTGCATTCTGTAAAGGTTC
CCCGTATTTATAAACTCACGGCTGACATCGTGCGCCGCGTGCGAGAGGATGGTGCCAGTTTAAAGAGTCTGATTTATGAA
AAAAAACATCCCAATGTATCCGGCATATATGGTCTTTCAATGAATACCTTACAAATGCTGCCAATGTTGGATCAGCTTTT
GCAAAAAATTCAAATTCTCACGGAACAACCGCGACTGAACTCCTGGTTAGCCAGAGTTCTCATAACAGAGCTTTTGTGGG
GAAAAAAATGTCTGAGGAACAATTCCAAACCGGTTTTAACGGTCCTAGCTTATAAGGATAAACTGCAAGAAGAATTGAAG
AACTTGAAATGCATAGAAACCCTCATCTCTCATAAAAATAAAGGTATCATAGATTTGGTCTTTAGACAGTCATCATTGCA
CAGTAGAAACATCCTTCTTCATGGTCCTGATTATCCGCAACTGCAGAATACTATCCAGTTGACGGAACAGAAAGAGGCTG
GAGTTAGAAAACTGTGGCATTATCAGAAGTCCTGTCATCAGGAACTAATTTGTGATAGATTAAATAACTACACTATGAGC
TTAGTAGCAGTACTGGGAACATTATTTCTTTATAGTGTTGCCATGTTTACTTTACCATTTGCTGCTTTCTTTGGAATACG
ACATTTTATTACATTAAAATTCCATACCGATACTTTTATGACCAATTGCATTTCTGTACTAGCTGCTGTGATAACAGTAA
ATTTGATTATTTTTTGTTATGCTTATCAAGCTTTGAATGAGTCCGACGAGGAGAAAGAGCTAAGTGAAGATGAAGTTAAA
GTAGAATCGAAAGAGATGCAAAAGCCTAGATATGTCCGTGTCAACACTCTTATGTTGTCAGTAGAGAAAGCTATCTCTAT
CTTCCAGGAGGCAGGATGGAAGTTGTTATCCAGAAGCACAACATACTCTTCATATCTACAATCTTTATCACAATTATCTA
AGCCTTACTTCATACAAGATCTACATATACCAGAAGTCCTAGCTTTTCCGTTCTCAACATCTTTTCATCAACATCCTAGC
TACCAAAATGGCGAACTTATTCTCCAAGATAAGGCTAGTTGCTTGTCAGTACATTTGTTGGATCTTGTCAATGAGGCTAC
AGTGCTCGACATGTGCGCAGCACCCGGTATGAAGGCCACATATGTGGCAGCCAAATTACACAATCATGGAACGGTGTACG
CTGTGGAAATTGATGCTAAACGATTTGAGACTTTATGCAATCAGATAGAGACGACTCACGCCTTCTGCGTGAAACCTATT
AAACAAGACGCTTTAACTCTCGACCCAAAGCAATACTTAGATGTAGAATATATTTTGGTTGATCCAAGCTGTTCTGGATC
AGGGATTATAGACAGACCAAAACAAAGTAATATGGATGGCAAATCTGAACCAGAACGCTTACAAAATCTACAATCATTTC
AAGTTTATCTTCTTAGATATGCACTCTTTAATTTTCCCAATGTAAAGAAGATAATCTATAGCACTTGTTCTCTTCATCCC
GAAGAGAACGAAGAAGTGATAGATGAAGTTCTTGCTGATATTGGTGACGCTTATTATCTGGTACCTGCTAAGCAGTTGTT
GAATGATTGGACAAATTTCAGCTCACAAAAATACAATTGTAAAGATAGATGTTTATATTCAAAACCGGATGTTGATTTTT
GCAATGGTTTTTTCGTGGCAATATTTGAAAGAAACTTTGAAGTAAATCTACCAAAATGCAAACGCAAAGGGGGTAACGTA
AATCCTACTGAAGCTAACTTAAGTATCACAAAAGATGAAACGATAAAAGAAGTTACATACAAGCGAAAAAATATGGGAAG
GACAAAAAGAACAAAGAAGAAATCCCAATTGATCAAGAAATAA
PEP: 
>LH10649-PA
MSSGFVHSVKVPRIYKLTADIVRRVREDGASLKSLIYEKKHPNVSGIYGLSMNTLQMLPMLDQLLQKIQILTEQPRLNSW
LARVLITELLWGKKCLRNNSKPVLTVLAYKDKLQEELKNLKCIETLISHKNKGIIDLVFRQSSLHSRNILLHGPDYPQLQ
NTIQLTEQKEAGVRKLWHYQKSCHQELICDRLNNYTMSLVAVLGTLFLYSVAMFTLPFAAFFGIRHFITLKFHTDTFMTN
CISVLAAVITVNLIIFCYAYQALNESDEEKELSEDEVKVESKEMQKPRYVRVNTLMLSVEKAISIFQEAGWKLLSRSTTY
SSYLQSLSQLSKPYFIQDLHIPEVLAFPFSTSFHQHPSYQNGELILQDKASCLSVHLLDLVNEATVLDMCAAPGMKATYV
AAKLHNHGTVYAVEIDAKRFETLCNQIETTHAFCVKPIKQDALTLDPKQYLDVEYILVDPSCSGSGIIDRPKQSNMDGKS
EPERLQNLQSFQVYLLRYALFNFPNVKKIIYSTCSLHPEENEEVIDEVLADIGDAYYLVPAKQLLNDWTNFSSQKYNCKD
RCLYSKPDVDFCNGFFVAIFERNFEVNLPKCKRKGGNVNPTEANLSITKDETIKEVTYKRKNMGRTKRTKKKSQLIKK
Swiss-ProtProbable 28S rRNA (cytosine-C(5))-methyltransferase
KEGG     K15264     
SUPERFAMILYSSF53335  S-adenosyl-L-methionine-dependent methyltransferases superfamily     
Gene3DG3DSA:3.40.50.150     
PfamPF09446  VMA21; VMA21-like domain     
ProSiteProfilesPS51686  SAM_MT_RSMB_NOP; SAM-dependent MTase RsmB/NOP-type domain profile.     
PRINTSPR02008     
CoilsCoil
OrthologiGroup-00205    Probable 28S rRNA (cytosine-C(5))-methyltransferase      

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