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Gene detail [Fasta]

Species Linepithema humile
GeneLH21853
Positionscf7180001005015:1300605..1304348[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH21853
sequence mRNA: 
>LH21853-RA
ATGGATGATGATATCGATGATAAAGACGATACAAAGCGGAAATCGCGTAATCTTAGCGAAAAGAAACGCAGAGATCAGTT
CAACATGCTCGTGAATGAACTCGGCAGTATGGTTAATGCCAATACGCGAAAAATGGACAAATCTACAGTACTGAAATCGA
CAATTTTATTTCTAAAAAATCACAACGAGATAGCAGTTAGGTCGAGAGTCCACGAGATTCAAGAAAATTGGAAACCGTCT
TTTCTTTCTAACGAAGAATTTACTCATCTTATATTAGAGGCATTAGAAGGATTTATAATGGTGTTCTCATCAAACGGATG
TATTTATTACGTCTCCGAAAGTGTTACATCTCTGCTTGGATATCTTCCGAATGAATTAGAGAACACGACTATTTATGATA
TAACATATCATGAAGATCAGCCGCATTTATACAATGTACTACTGAATCCTGGCGGTACACGAGATAGACGCACTGTGAAA
AAAGAGGATCAAATATCTTTTACATGTCATATCAGAAGAGGCGGACGCGATTTTCGGGACGATTCCATCTTTGAACTTGT
ACATTTTATTGGATATTTTCGTTCCGCCGCAGATGGCAATGTAGACAATTTACTGCGCAATCAAAAATTTAGCAATACCA
GCGAATCAGACAAATTAGTCTTCGTGTGTACAGGACGTCTTCAAACTCCGCAACTCATCCGTGAATTATCCGTGACGGAT
AATGCAAAGTCAGAATTCACTTCTCGTCATAGTCTTGAATGGAAATTTCTATTTTTGGATCACAGAGCACCGCCCATCAT
CGGATATCTTCCTTTCGAAGTGTTGGGCACTTCTGGTTACGATTATTATCACATAGACGATTTAGACAACGTAGTCACGT
GCCACGAATCACTGATGCAGAAAGGCGAAGGAACGTCTTGCTACTATAGATTCCTCACGAAGGGTCAGCAGTGGATTTGG
CTACAGACCAGATTCTACATTACGTACAATCAGTGGAACTCAAAACCTGAATTCATCGTGTGCACGCATTACGTGGTCAG
TTACGTCGACGTATTGAAGGAATTGCGCGCGGAATCGGAGGATTACGATAAAACGCAATATCAGGATGTTTTACTGCCCG
TAAAACAGGTGACGGCATCTTGTCAAACACCATTAACACAATGGTCAAATAAATCGCCGAAGAGTTCGAAGTCAATGCCA
GTCTCTTCCAATCTCCATCATTGCGGTGATGGTTTTAATACGTCTTCAATATCACTCTCGCTACGAAGTTCTCCGCAATC
ACAAATAATACACGGATCACGATCAAACGCGGCTTCCACGAGAAGTTTCGTTGCCTTAAAGCCGGTAGCGTCGGTAGACA
GTAGGCAACAACAACAACAGCAACAACAACAACAAACACAACAGCAACCACAACAACAGCAGCAGCAGCAGTCTCAGTTG
GATGTCAATCAATCATGCATTAATTTTATGGATCCTACACAATACGCAACAGTTAATCTGCAATCAGTTGTCACAGGAGG
ATTTGCAACATCTGCTGCTCCTATACTTTCAACTGTGCCTACTCATGAGATGTTACATCAACAGAGCATAGTAATGACTC
CCGCACAGAATCAACTACAAGACGAATTACAACGAAAGCACGAAGAGCTACAACAGCTAATCGTTCATCAACAAGAGGAA
TTGAGGAGGGTTTCAGAACAATTATTTATCGCTCGATACGGGATTCTTACGCCATTACTTAATGCGGGTATAGCGTACAA
TCCATCGAACCAGTGTCAACAAACGAATCGGTGTAACACCAACAGTGCTAACATGCAATTACCTGCATCCAATAGCGTAC
AAAGTGTGAATGTACTTCCCATACCAATCACCGTGCCAGTGCCTATAGTGTCTACTGAATTATTTTCTCATTCTTTACAA
AATCAACAACAACATTCACAGTTGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGGGTCCACCGCAGCAGGA
AGACAACAATCCTGATCTTATGTCTTTCCAAATCTGCCCTCAACAGACTGAAATGATGTACGGTAGCATGGAAGCATCCT
TGAATCAACAGCAGAGATCTTCGTAA
PEP: 
>LH21853-PA
MDDDIDDKDDTKRKSRNLSEKKRRDQFNMLVNELGSMVNANTRKMDKSTVLKSTILFLKNHNEIAVRSRVHEIQENWKPS
FLSNEEFTHLILEALEGFIMVFSSNGCIYYVSESVTSLLGYLPNELENTTIYDITYHEDQPHLYNVLLNPGGTRDRRTVK
KEDQISFTCHIRRGGRDFRDDSIFELVHFIGYFRSAADGNVDNLLRNQKFSNTSESDKLVFVCTGRLQTPQLIRELSVTD
NAKSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLDNVVTCHESLMQKGEGTSCYYRFLTKGQQWIW
LQTRFYITYNQWNSKPEFIVCTHYVVSYVDVLKELRAESEDYDKTQYQDVLLPVKQVTASCQTPLTQWSNKSPKSSKSMP
VSSNLHHCGDGFNTSSISLSLRSSPQSQIIHGSRSNAASTRSFVALKPVASVDSRQQQQQQQQQQTQQQPQQQQQQQSQL
DVNQSCINFMDPTQYATVNLQSVVTGGFATSAAPILSTVPTHEMLHQQSIVMTPAQNQLQDELQRKHEELQQLIVHQQEE
LRRVSEQLFIARYGILTPLLNAGIAYNPSNQCQQTNRCNTNSANMQLPASNSVQSVNVLPIPITVPVPIVSTELFSHSLQ
NQQQHSQLQQQQQQQQQQQQQGPPQQEDNNPDLMSFQICPQQTEMMYGSMEASLNQQQRSS
Swiss-ProtCircadian locomoter output cycles protein kaput
KEGG     K02223  CLOCK, KAT13D; circadian locomoter output cycles kaput protein [EC:2.3.1.48]     
SUPERFAMILYSSF47459  HLH, helix-loop-helix DNA-binding domain superfamily     
Gene3DG3DSA:3.30.450.20     
PfamPF00010  HLH; Helix-loop-helix DNA-binding domain     
SMARTSM00086     
ProSiteProfilesPS50112  PAS; PAS repeat profile.     
PRINTSPR00785     
CoilsCoil
OrthologiGroup-00823    Circadian locomoter output cycles protein kaput      

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