Warning! We strongly recommend Internet Explorer (9.0 and later) and Google Chrome for better display.

Gene detail [Fasta]

Species Linepithema humile
GeneLH11369
Positionscf7180001004461:140548..148108[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH11369
sequence mRNA: 
>LH11369-RA
ATGTGGAATTATCCAAGTATCCGAGAGGAAAAGAGTGGTGCGAGAAAGAGATTCCGCAGGCCGACGACTTCCGCGCCGTC
GATCTCGAACGATCAGGAGGTCTCAGCCAGTGTCAACAGGTTCAAGGTTACGCGGAATCGTGTCAGCAACAAGAGCACGA
AGAACGAACTTCAGCCTGGCAAGACAAACGACTATAAGCTCGTATGCTATTATAGCAATTGGTCTCAGTATCGCACGAAG
ACCGGCAAGTTCATGCCGGAGGACATTCAACCTGACCTCTGCACCCACATTGTCTTCGCCTTCGGATGGCTAAAGAAGAA
CAAACTGACCAGTTTCGAGTCGAACGATGAAACGAAGGACGGCAAGATCGGCCTGTACGAGAGGGTGGTAAATCTCAAAA
AAGCCAACCCGTCTTTGAAGATTCTGCTTGCCATCGGTGGTTGGTCCTTCGGCACGCAGAAGTTCAAGGATGTATCCTCG
ACGAGATACGCCCGGCAGACCTTCATCTACAGCGCTATACCGTACTTGCGGGACAGGAACTTCGATGGCCTTGACATCGA
CTGGGAATACCCGAAGGGTGGGGACGACAAGAAAAACTACGTTTTGCTGCTTAAGGAGCTCCGAGAGGCTTTCGAGGCGG
AGGCGCAGGAGAGGAAGAAACCGCGTCTCCTCTTAACCGCTGCGGTACCGGTTGGACCTGACAACGTTAAGAGCGGTTAT
GATGTGCCTGCTGTTGCCAGTTACCTGGATTTCATTAATCTCATGGCCTACGACTTCCACGGAAAATGGGAGAGAGAAAC
CGGTCACAACGCCCCGTTGTACTCCTCGTCATTAGACTCGGAATGGCAGAAACAATTAAGTGTCGACAACGCGGCCACCA
TGTGGGTCAAGATGGGCGCACCGAAAGAAAAATTGATCATAGGCATGCCGACGTACGGCCGGTCCTTCACTCTTTCAAAT
ACCGCCAATTTCCGCGTACACGCTCCGGCTAATGGTGGTGGAAAAGCGGGCGAATACACGAAGGAATCTGGCTTTCTCGC
GTATTACGAGATTTGCGAAATGTTGCATAACGGCGCAGCTTATGTTTGGGACGACGAGATGAAAGTGCCTTATCTAGTGC
ACAACGATCAATGGGTCGGCTTCGACGACGAGAAGTCCATCAGGAATAAAATGCACTGGCTAAAGAGCAAGGGTTACGGA
GGCGCAATGGTATGGACGGTGGACATGGACGACTTTAACGGCACCGTTTGTGGCGGAAACGTTCGATATCCGCTAATTGG
CGCGATGAGGGAGGAGCTGAGAGGTATCTCGCGAGGTTCCAGTGCCAAGGATGTCGACTGGACTGCGGTTGCCACCACCA
TCACAGAAACGATCGTGAAGAAGCCGGAGCCTTACAAGATTTCCGTTTCGGAGGTCCTCAGCAAGTCGAAAAAACTTCAG
AAGTCTACAACACTTGTCATCAATACGCCGACTCATGAGAGAGAAGCGCAGACCATTTGTTATGTAACAAATTGGTCGCA
TAAAAGGCCGGGAATGGGACGATTCAATCCGGAAGACATTGACCCGACTCTCTGCACTCACGTGGTATACGCGTTTGCTA
CTTTGAAGGATCATCTACTTACCGAAGGAAGTGACAAAGATGCTGAAATGTACCGCAGACTGATTGCGCTCCGCGACAAG
AATCCAGATATTAAAATTCTACTCGCAATCGGAGGATGGGCATTCGGCTCGACGCCGTTTAAAGAACTTACCAGTAATAC
CTTCCGAATGAACCAATTTGTTTATGAGGCTATCGATTTTTTGCGGGAATACAAATTCGACGGATTGGATGTTGACTGGG
AATATCCAAGAGGAGCCGACGATCGAGCGGCCTACGTTAATCTTTTAAAGGAGCTTAGGCTGGCTTTCGAGGGCGAAGCG
AAGAGCTCCGACCAGCCGAAATTAATCCTGTCAGCCGCAGTGCCCGCTAGTTTTGAAGCCATTGCTGCAGGGTACGACGT
TCCTGAAATATCTAAATACCTAGACTTTATCAATGTGATGGCTTATGATTTTCATGGTCAGTGGGAGAGACAAGTTGGCC
ATAATAGTCCATTGTATCCTTTGGAAAGTACCACCAGTTATCAGAAAAAGCTGACAGTGGATTATAGTGCGCGAGAGTGG
GTGAAGCAAGGAGCGCCAAAGGAAAAGCTTATGATCGGAATGCCCACGTATGGTAGATCCTTCACGCTGGTCGACAAAGA
CAAATTTGATATTGGTGCACCAGCGTCTGGTGGTGGAGTGGCGGGTAATTTCACCAACGAGTCCGGATTCCTTTCCTATT
ACGAGGTCTGCAGTTTCTTGAACGAAGATAACACGACTTTAGTATGGGATAGCGAGCAACAAGTACCATTTGCATACAGA
GATGATCAATGGGTTGGATTCGACGACGAGAGAAGTCTTATTAACAAAATGGCTTGGCTTAAGGAAGAAGGCTTTGGAGG
CGTCATGATCTGGTCAGTTGACATGGACGATTTCAAAGGATCTTGCGGAGCAGGAAAGTATCCGTTAATAAAAACAATGA
AGAAGGAATTGCAAGACTACAAAGTCAAGCTAGAATATGACGGTCCTTACGAAAGTACTTCGAGAAGTGGAAAATATACT
ACTAAAGATCCAAATGAAGTAACCTGTGACGAGGAAGACAATCATATATCTTATCACGCGGACAAGAATGACTGTACGAT
GTACTATATGTGCGAAGGTGAGCGCAAGCATCACATGCCCTGTCCTGTAAATCTGGTCTTCAATCCCAACGAGAACGTTT
GCGACTGGCCGGAGAATGTCGAAGGCTGTTTGCAGCACACGCCAGCGCCGCCCGTATAAAGCGAAAAACGTAATTTTCGC
GAAACTGTAAGATAAGAACGTGACGAAAGTCTAGGGAAAATAATATTATTAAAAACATTCATCGATTCTCAAGTAATAAA
GTAAGTATATTACGTACATCGCGCGATTAACAACGAGTTTTCTCTCCACGAATTTCTTTTATCCCATTATATCTCACGAA
TATCTTATTGTCTACATTTCTTTGTCTCTCCACTTCTTAAGGATTTTTATCCCATTTTCGCATATTTTTTACCCTCGCCA
TCTGTATAAAGCACAAGCGAAATCATGATAATTGAATTTGTAAATAAAGATAAATCTCTCGGAATAA
PEP: 
>LH11369-PA
MWNYPSIREEKSGARKRFRRPTTSAPSISNDQEVSASVNRFKVTRNRVSNKSTKNELQPGKTNDYKLVCYYSNWSQYRTK
TGKFMPEDIQPDLCTHIVFAFGWLKKNKLTSFESNDETKDGKIGLYERVVNLKKANPSLKILLAIGGWSFGTQKFKDVSS
TRYARQTFIYSAIPYLRDRNFDGLDIDWEYPKGGDDKKNYVLLLKELREAFEAEAQERKKPRLLLTAAVPVGPDNVKSGY
DVPAVASYLDFINLMAYDFHGKWERETGHNAPLYSSSLDSEWQKQLSVDNAATMWVKMGAPKEKLIIGMPTYGRSFTLSN
TANFRVHAPANGGGKAGEYTKESGFLAYYEICEMLHNGAAYVWDDEMKVPYLVHNDQWVGFDDEKSIRNKMHWLKSKGYG
GAMVWTVDMDDFNGTVCGGNVRYPLIGAMREELRGISRGSSAKDVDWTAVATTITETIVKKPEPYKISVSEVLSKSKKLQ
KSTTLVINTPTHEREAQTICYVTNWSHKRPGMGRFNPEDIDPTLCTHVVYAFATLKDHLLTEGSDKDAEMYRRLIALRDK
NPDIKILLAIGGWAFGSTPFKELTSNTFRMNQFVYEAIDFLREYKFDGLDVDWEYPRGADDRAAYVNLLKELRLAFEGEA
KSSDQPKLILSAAVPASFEAIAAGYDVPEISKYLDFINVMAYDFHGQWERQVGHNSPLYPLESTTSYQKKLTVDYSAREW
VKQGAPKEKLMIGMPTYGRSFTLVDKDKFDIGAPASGGGVAGNFTNESGFLSYYEVCSFLNEDNTTLVWDSEQQVPFAYR
DDQWVGFDDERSLINKMAWLKEEGFGGVMIWSVDMDDFKGSCGAGKYPLIKTMKKELQDYKVKLEYDGPYESTSRSGKYT
TKDPNEVTCDEEDNHISYHADKNDCTMYYMCEGERKHHMPCPVNLVFNPNENVCDWPENVEGCLQHTPAPPV
Swiss-ProtProbable chitinase 3
KEGG     K01183  E3.2.1.14; chitinase [EC:3.2.1.14]     
SUPERFAMILYSSF57625  Invertebrate chitin-binding proteins superfamily     
Gene3DG3DSA:3.10.50.10     
PfamPF00704  Glyco_hydro_18; Glycosyl hydrolases family 18     
SMARTSM00494     
ProSiteProfilesPS50940  CHIT_BIND_II; Chitin-binding type-2 domain profile.     
ProSitePatternsPS01095  CHITINASE_18; Chitinases family 18 active site.     

You might be interested in these researchers

You might be interested in these references