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Gene detail [Fasta]

Species Linepithema humile
GeneLH17111
Positionscf7180001004925:43234..50641[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17111
sequence mRNA:
>LH17111-RA
ATGGCGGCGCCGGTGATCGAGAAGAAGCGCTTCTTCTGCCGAGAATGGGCCTTCATGAAGCTGTCGCATTGCCTGGAGCA
GCGGCCGCAGTCGAAGACCTGCGGTGCCCTGATCGTGGGCGGGCCGGGCAGCGGCAAGACGGCGTTCTGCGCCGAATTAG
CGTGGCCTTCGAACGGCGCTTCCGCGAGGCACCAACGCTCGCTGAATCGCCGCCTGCTCGCCCGGCACTTCTGCCAGGCC
AGAAGCGAGGCCTCTCTGTCGCCCGCTCAGTTCGCGCTTCTGTTCCCGCTGCTCGAGGTGGAGCCGCCGAAGAACTGTCT
CTTCCTGCTGGTGGACTCCATCGACGAAGGTCAGACGTTGAATCCACCGCAGAGCGGCACCAGGGACTCGAGAAGGGAAA
ATGACAATGTCAGTCGCACGATAGCTGAATTACTGGCTAATCACCACCATCTGTTCCCACAGTGGCTCTTGTTAGTCTGC
ACCGCGCGGCGACAGAGTAAGACCATCTCGCGCATGTTCACCGGCTTTCGCAAGATCTCGCTGGACGATCTGAGAAAGTC
CCAGGTCGTCAGGGACGTGCAGCAGTATATACTCGCGCGCTTGGATCAGGAGGACGCGCTCAGGCAGCACATCTCGCGCG
ACACCGCCGAGATGCTGAACCAGCTGCACATAAAGAGCAACGGTTGCTTTCTGTACCTGGAGAAAGTTCTCGACGGCGTG
GCGGAGAATTTCATTGTTCTGCGCGAGGTACGTGAGATTCCGGGAACACTGAACGGCCTATATCTCTGGCTGTGCCAGCG
ACTCTTCAGCAGGAAGCAATTCAGCAAAGTGCAACCTCTTCTCAACGTCATACTCGCCGCTAAATTGCCCATCACTCAGG
AGATTCTGTACGAGAGCGTGAAGACAGCTTGTGTCGGCATCACCGTCGAGGACTTCAATCGTCGGCTTCATCTGCTGCGC
CGTGTGATATCGGTCTCGCGCGCCGGTGCGCTGATGCTCTTCCATCACAGCTTCGCCGAGTGGCTGCTGGACGTTAAACA
CTGCACCCAGAAGTATCTCTGTTCGGCCACCGAGGGCCACGCCATGCTGGCGGCTCATTACACCCTCCGCGGTCCCGAGC
TCAATCCGGACGAGATCTGCGTGCTGGCGCAACATCTGCAACGCGTGATAACGAGCATTCCGGCCAGCACCACTCTGGAT
GTTCACACTCTTCAAATTCTTTGGATGGTCGGCAGCAACGCGCCCATCGAAGACTGTTATTTAGATAGTTCTGAGTGCAT
TCTCTGGCCCAGGCAGGACTTGAAGCTCCTCAGATTGCTAATCGACGCTGGCGCGAAGCCTTCCGAAAAGACCACCGAGG
ACGACGCCGGCAAAGATGCCGTTTCTTCTAGTCAGGTTTCACATGATGTAAGCCCTATTGATGAATCTCCGAGTGAGCCG
TTGACGGAGCTTCTCGGTGAAAGTGGAGATATCAATCAAGCAGACTCTTACGGACGAACCGTGTTACACACATTAGCCGC
CGATGGCAATGCATCTCTGTTGGAATTGGCGCTTGCAGCTTGTCCGCAGGCAAAATTGGAAGCAGTTGATCGGAATGGAC
AAACGCCACTCAATCTGGCTGCGAGGCACGGTTACACGGATGTAGTGCGTGTGCTTTTAGCTGCCGGCGCGAGGGTGGAC
CACGCGGACTGCGACGGGTGGACTGCCCTTAGAGCTGCTGCTTGGGGAGGACATACTCAGGTGGTCGAACTACTTTTAAA
GCACGGAGCGATGGTCGACTGCGCGGATTGGGATCAACGAACCGCGCTGCGAGCAGCCGCCTGGGGCGGTCACGAGGACA
TCGTCAAAGCTCTCTTGAAGCACGGCGCCGACGTTAACAGAACGGACGACGAGGGTAGAACCGCCTTGATCGCTGCTGCG
TACATGGGACACAGCGAGATCGTGGAGCATCTTTTAGACTTCGGGGCCGAGATCGATCACGCCGACAGCGACGGTAGAAC
TGCGCTCAGCGTCGCTGCACTTTGCGTCCCTGCCAATCACGGATACGCAAAGGTCGTCACGATACTTTTAGACCGAGGCG
CCACGGTGGATCACCAGGACAAGGACGGTATGACTCCGCTCTTGGTCGCCGCGTTCGAGGGTCACCGGGACGTTTGCGAT
CTGCTTCTGGAATACGACGCGGACATGGATCATTGCGACGTCACCGGGAGGACGCCTCTGTGGGCGGCCGCGAGTATGGG
ACACGGATCGGTCGTGAAGCTTCTGCTGTACTGGGGCTGCTGCGTCGACACTATTGACAACGAAGGCAGAACCGTTCTCA
GTATAGCCGCTGCCCAGGGCGGCACAGATGTTGTGAAGCAGTTGCTCGCTAGAGGCCTAGACGAGCAGCATAGAGACAAT
TCTGGCTGGACTCCGTTACACTACTCGGCGTTCGAGGGTCACGTGGACGTTTGCGAGGCGTTGCTGGAAGCTGGCGCGAA
GATCGACGAGACGGACAATGATGGGAAGAGCTCTCTTATGCTCGCGGCGCAGGAAGGACACACATCGTTGGTGGAAAGGT
TGCTGAAACAACACAACGCGCCTATAGATCAACACGCTCACGATGGTAAAACTGCTTTAAGACTCGCAGCTCTGGAGGGA
CATTACGATACCGTGAAGATATTGTTATCTCACAACGCTGATGTCAACGCGAAGGATGCCGATGGAAGGAGCACTCTATA
TATACTCGCATTAGAAAACAGACTAGCTATGGCGAGGTTTTTGCTGGAACACGCAAACGCGGACGTGGAAAGTAGAGATT
CAGAGGGTAGAACATCACTGCACGTGAGCGCTTGGCAAGGTCACGTGGAAATGGTAGCATTGTTGCTGACGGAAGGTGGA
GCTAGCGTGAATGCTTGCGACAATGAAAACAGAACACCACTTCATTCCGCCGCCTGGCAAGGTCACGCAGCGATCGTCAG
GCTGCTCCTAGAACACGGTGCCACTCCTGATCACACTTGCAACCAAGGTGCCACGGCTCTAGGTATCGCCGCTCAGGAAG
GACACGAGCATTGCGTCCGGGCGCTTTTGAACCATGGAGCCGATCCGAATCATTCCGATCATTGCGGACGTAACGCTATT
AAAGTAGCCGCTAAAAGTGGCCACGACACGGTTGTCAGGCTACTAGAAGAACATTCAGCCAACCAACGCAGCTTGAGACC
CGGCATTAATGGAGGTGGTAGCAGTAGTGCTACTTCCGTAACATCCAATTCGACGGCTGAGACTAAGCCTTCATCGGCAA
TCCTGAATCCTCTGTCGACGCAATACAGCCCAGCGGAATCGCCAGATTCAACCAAGCGGCGCAGTTGCGTCTCTTTAGGC
AACAATTCGAGCAATAGCAAATCGAGCAGCAACTTAACCGGCAGCACAAAGAGCGATCAGGGAAAATTCAATCAAAATTC
AATGGTTAACTGTCAGACACCATTATCTTTCACCCAACAACTGCAGCAATGTTCAAGAGGAGCAAAGAGTCGGCCGCTCA
GTAAATTATTGTCGCCTTTGAAAAGCGAGCCGCAGAGCCCGATATACGCCTCACCTCCGCATTCTCCGCTAAGCGACAGC
CTTATCCCTTACTCGCCTACGAACACGAGTCCGCCCAGTGCTCAAACGGCTGCGAACGTGATTCAGAGTCAGCTGGGTGT
GTCATTGATGGGCGGAAATCCTAATATCTCCTACAAAATGGGATATAATCACACGCCGGTCATTTACGAGCCGATCAACA
TCAAAACCGAGCTTATCGATCGCAATAACATTGGCAAACCGTTCGAATTGACGAATGAAATGCTAGGTTTGAGCATCGGG
AAGGACAAGGAGAACGGACACGAGGATAAACGAAATTCGGCCGACACGCATTTTACGCGTGACACTCATATGAGAATAAT
ATTGGGGAATAGCGGCGCTGGCGTGGGCAGAAGCGTCAAGCACATTACGGATCACACGTCTGGAAGTGCAGGTAATGCAA
AACCAAAGCGTAATGGCTTGGTGTCCAACCCAGCCATGAGATTAGTGGCAGGCGTTAGAAATGGAATTGAGAATGCTACG
AACAGAAATAAGCCTATTACAACGCGAGTAAATGGATTCCAGTGGAAGGCGGAAGCGCGCAAGGAAACGCCTTTGTAG
PEP:
>LH17111-PA
MAAPVIEKKRFFCREWAFMKLSHCLEQRPQSKTCGALIVGGPGSGKTAFCAELAWPSNGASARHQRSLNRRLLARHFCQA
RSEASLSPAQFALLFPLLEVEPPKNCLFLLVDSIDEGQTLNPPQSGTRDSRRENDNVSRTIAELLANHHHLFPQWLLLVC
TARRQSKTISRMFTGFRKISLDDLRKSQVVRDVQQYILARLDQEDALRQHISRDTAEMLNQLHIKSNGCFLYLEKVLDGV
AENFIVLREVREIPGTLNGLYLWLCQRLFSRKQFSKVQPLLNVILAAKLPITQEILYESVKTACVGITVEDFNRRLHLLR
RVISVSRAGALMLFHHSFAEWLLDVKHCTQKYLCSATEGHAMLAAHYTLRGPELNPDEICVLAQHLQRVITSIPASTTLD
VHTLQILWMVGSNAPIEDCYLDSSECILWPRQDLKLLRLLIDAGAKPSEKTTEDDAGKDAVSSSQVSHDVSPIDESPSEP
LTELLGESGDINQADSYGRTVLHTLAADGNASLLELALAACPQAKLEAVDRNGQTPLNLAARHGYTDVVRVLLAAGARVD
HADCDGWTALRAAAWGGHTQVVELLLKHGAMVDCADWDQRTALRAAAWGGHEDIVKALLKHGADVNRTDDEGRTALIAAA
YMGHSEIVEHLLDFGAEIDHADSDGRTALSVAALCVPANHGYAKVVTILLDRGATVDHQDKDGMTPLLVAAFEGHRDVCD
LLLEYDADMDHCDVTGRTPLWAAASMGHGSVVKLLLYWGCCVDTIDNEGRTVLSIAAAQGGTDVVKQLLARGLDEQHRDN
SGWTPLHYSAFEGHVDVCEALLEAGAKIDETDNDGKSSLMLAAQEGHTSLVERLLKQHNAPIDQHAHDGKTALRLAALEG
HYDTVKILLSHNADVNAKDADGRSTLYILALENRLAMARFLLEHANADVESRDSEGRTSLHVSAWQGHVEMVALLLTEGG
ASVNACDNENRTPLHSAAWQGHAAIVRLLLEHGATPDHTCNQGATALGIAAQEGHEHCVRALLNHGADPNHSDHCGRNAI
KVAAKSGHDTVVRLLEEHSANQRSLRPGINGGGSSSATSVTSNSTAETKPSSAILNPLSTQYSPAESPDSTKRRSCVSLG
NNSSNSKSSSNLTGSTKSDQGKFNQNSMVNCQTPLSFTQQLQQCSRGAKSRPLSKLLSPLKSEPQSPIYASPPHSPLSDS
LIPYSPTNTSPPSAQTAANVIQSQLGVSLMGGNPNISYKMGYNHTPVIYEPINIKTELIDRNNIGKPFELTNEMLGLSIG
KDKENGHEDKRNSADTHFTRDTHMRIILGNSGAGVGRSVKHITDHTSGSAGNAKPKRNGLVSNPAMRLVAGVRNGIENAT
NRNKPITTRVNGFQWKAEARKETPL
Swiss-ProtAnkyrin repeat domain-containing protein 50
SUPERFAMILYSSF48403  Ankyrin repeat superfamily     
Gene3DG3DSA:1.25.40.20     
PfamPF00023  Ank; Ankyrin repeat     
SMARTSM00248     
ProSiteProfilesPS50297  ANK_REP_REGION; Ankyrin repeat region circular profile.     
PRINTSPR01415     

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