Warning! We strongly recommend Internet Explorer (9.0 and later) and Google Chrome for better display.

Gene detail [Fasta]

Species Solenopsis invicta
GeneSINV14838
PositionSi_gnF.scaffold10535:896103..900476[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/sinv_10/?name=SINV14838
sequence mRNA:
>SINV14838-RA
ATGGCGGAACTGATTGCGATACCGTTGAAGAAGCCGTCCGATGTCGATGTCGTGAAGCCGCTCACCAATGTCATCCGATC
GACATACAGCGGCACAGGTAAAGATTATGCGGACGCCATCGCAGAGTTCAGCAAGCTGCGGAACAACGCTCTATGGCGTG
CCTTCGAGAAGTACGAGAGCTCTTTACAGGTTATCTACAGTTTGGCTTTAACAGAATTTAATTCTTTGTGTAGAGCAGAT
TTAAAATTGAAAAAGATAGAGTTAGATCTTGGAAATATATGGAAAGAAGATCTTAATTGGGTGATCTATTATGATCAATT
ATGCGCTCTGGAAGGGAAAATCCCTGCTCATGAATTACAAATACCATTCAAATGGAAAGATGCCTTTGATCGTACGATTT
TTGGAGGAAAACTTAGTTTGACGATCAGTACATTGGCATACGAAAAAGTATGTGTGCTCTTCAATATCGCTGCTTTGCAA
AGTTCTGTGGCAGCTACCCAGTCCTTGGACAGTGATGAAGGATTAAAGCTGTCAGCTAAATTATTTCAGCAATCGGCTGG
AATATTTAATCATCTGAAGGGAAACGTTATGATGGCGATTCAGCAAGAACCGACACCTGATATTAGCCCAGAAACACTCG
GAGCGTTGAGCGCTTTAATGCTCGCGCAAGCACAAGAGATATTCGTTCACAAAGCGATCCATGATTCCATGAAGGATGGT
ATTGTTGCTAGACTGGCGGCGCAGGCGGAAGAACTGTACGCGGACGCTCTGAAACTATTCCAAAAGGAAATCTTTCGTGC
GTTTTGGGATAAGGAATGGGTGCCATTGATCGCGGGTAAACAAGCTGGTTACCGTGCCATGGCTGAATTTCATCAATCGC
TTGTATGCAAAAGTAATAAAACTATTGGAGAAGAAATTGCTAGATTGGAGCATGCCGTGGAGTTGTTTAAAGCTGCTCAA
CAGAGATCGAATAAACCAAATCTGTTCCAAGATTACGCCAACAAGGCACAAAGAAATCTGACAGAGGTGAAGAAGGATAA
TGATTTTATATATCACGAAAGAATTCCAGATATTAAGCATGTAGAGGCTATAGGAAAAGCAAGCGTTGCTAAACTACTTC
CGCTACCTGAAATATTTAGTACCGATTTCAAAGATTTATTCGTCGAGTTGTTGCCCCTTAATGTACGCCACGCATTGTCG
GCCTACGAGAATCGTCGTAATGAACTCGTTAATTACGAAATTTCGAATCTTCGTGAAATGACTCAACTCCTAAATAGCGT
TTTAGCAAGCTTGAACTTGCCAGCCGCTATAGAAGATACGAGTGGTACGGAAATACCACAATCGCTATTGGATAAAGCAG
TTCGCGTACGAGAATCAGGTGGAATAAACGCTTTGGAAGCATCTATGAGAGAATTGCCGGATTTATTGCAGCGTAATAAA
GAACTTTTAGATGAGGTAAAAAAGATGATGCATATTTTTTTTTACAAAAGTTCTTTAAAAGTGTTGCATTATTTTTTACA
TCATCTTTTACAGTCTGAAAGAATGCTGCAGGAAGAACGTGAGTCTGACGACCAGTTAAGAGAGCAATTCAAAGAACGTT
GGAAGCGGACACCAAGTGCCCGATTGACGGAACAATTTACTAACAATTTACAAAAATATCGTGAAATTATAAATAACGCA
GTTTCTGCTGACAAGGTAGTTCGTGAGAAATATGAAAGCCATAAAGAAGGGATCGAAATCCTAAGTTTAGATGAGGACGA
ACTTTCAAGTGCTATTCCACAGGGATCTGCTCTCCAAGAAAGTAATGCTGTTATGAAACTTAGGAAATTAATGGAAGATG
TAGCCACATTGAAATCTGTACGAGACACCATCGAAAATGAATTTAAATTCGCTGCCAATGATATGAAGACAACGTTCCTT
TCGGCATTGGCCAAAGATGGCGCGATCGATGAACCAAATATATCTGTCGAGAGTTTGGGAAAGTGTTATGGGCCTTTGCA
GAAGCAAGTACGAGAAAGTATAGCACAACAGGAAAAATTAGTTGCTGAAATTCAAAGTTGCCATACAGAATTTACAAACG
AGCAAGCTGGTAGCGGCAGTGCGCGAGAAGCGATGCTTTGTAAACTGGCTTCTGCTTATGATGCATTTAAAGAGCTAAAG
AACAATCTAGTAGAAGGGGCTAAATTTTATAATGATTTAACGCAGCTACTCGTGGTTTTCCAAAATAAGATATCCGACTT
CTGTTTCGCACGAAAAACTGAAAAGGAAGAACTCTTGAAAGATTTAACTACGAATTTGAGTCAGACCGGTCCCGCTACAA
CACCGAGTATTCCATCTCATCACGGCAGTGGTCCTCCTGGCATAAATCCAACAGAAGCCGCCACATCGTCGCCGCAGCTG
CCTTATCCAGTCCAACATCAAGGTGGTATGCCTATACCTTACGGTGCTGCACCGACAACGCCGTATCCTGTTGTAACCGC
GCCGTATGCTCCTCCACCGTTGCCGACGACGTACAATCCATATGCTACAATGCCATATCCTACACAAGGTATAAATGGAG
ATCTCGTAGTTTTATCTGTAATATGTTCAAAAAGCATATATAAAATTGTTGATTTTTTAGGAGGATACAATCCATACCAG
AGTATGCCTCAAGCTCCATATGGAGGTTTCGCTACGTTACCACGTTACGGTGGCACTCAACCACCACCGCATGGTCAAAA
CCCA
PEP:
>SINV14838-PA
MAELIAIPLKKPSDVDVVKPLTNVIRSTYSGTGKDYADAIAEFSKLRNNALWRAFEKYESSLQVIYSLALTEFNSLCRAD
LKLKKIELDLGNIWKEDLNWVIYYDQLCALEGKIPAHELQIPFKWKDAFDRTIFGGKLSLTISTLAYEKVCVLFNIAALQ
SSVAATQSLDSDEGLKLSAKLFQQSAGIFNHLKGNVMMAIQQEPTPDISPETLGALSALMLAQAQEIFVHKAIHDSMKDG
IVARLAAQAEELYADALKLFQKEIFRAFWDKEWVPLIAGKQAGYRAMAEFHQSLVCKSNKTIGEEIARLEHAVELFKAAQ
QRSNKPNLFQDYANKAQRNLTEVKKDNDFIYHERIPDIKHVEAIGKASVAKLLPLPEIFSTDFKDLFVELLPLNVRHALS
AYENRRNELVNYEISNLREMTQLLNSVLASLNLPAAIEDTSGTEIPQSLLDKAVRVRESGGINALEASMRELPDLLQRNK
ELLDEVKKMMHIFFYKSSLKVLHYFLHHLLQSERMLQEERESDDQLREQFKERWKRTPSARLTEQFTNNLQKYREIINNA
VSADKVVREKYESHKEGIEILSLDEDELSSAIPQGSALQESNAVMKLRKLMEDVATLKSVRDTIENEFKFAANDMKTTFL
SALAKDGAIDEPNISVESLGKCYGPLQKQVRESIAQQEKLVAEIQSCHTEFTNEQAGSGSAREAMLCKLASAYDAFKELK
NNLVEGAKFYNDLTQLLVVFQNKISDFCFARKTEKEELLKDLTTNLSQTGPATTPSIPSHHGSGPPGINPTEAATSSPQL
PYPVQHQGGMPIPYGAAPTTPYPVVTAPYAPPPLPTTYNPYATMPYPTQGINGDLVVLSVICSKSIYKIVDFLGGYNPYQ
SMPQAPYGGFATLPRYGGTQPPPHGQNP
Swiss-ProtProgrammed cell death 6-interacting protein
KEGG     K12200  PDCD6IP, ALIX, RIM20; programmed cell death 6-interacting protein     
Gene3DG3DSA:1.20.120.560     
PfamPF13949  ALIX_LYPXL_bnd; ALIX V-shaped domain binding to HIV      
SMARTSM01041     
ProSiteProfilesPS51180  BRO1; BRO1 domain profile.     
CoilsCoil

You might be interested in these researchers

You might be interested in these references