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Gene detail [Fasta]

Species Solenopsis invicta
GeneSINV24530
PositionSi_gnF.scaffold02592:960281..979718[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/sinv_10/?name=SINV24530
sequence mRNA: 
>SINV24530-RA
GGATGCTCAGGAAATCCAGACGCGAAGCGATTATACGACGACCTATTGTCGAATTACAACAAGCTGGTTCGTCCAGTGGT
CAACGTCACAGACGCCCTCACCGTTAAAATAAAACTCAAGCTTTCGCAGCTCATCGATGTGAATTTGAAGAATCAGATCA
TGACGACGAACCTCTGGGTCGAGCAGTCATGGTATGATTACAAGTTAAAATGGGATCCGAAGGAATACGGTGGAGTGGAG
ATGCTGCATGTGCCGTCGGATCACATATGGAGGCCCGATATAGTTTTATACAACAACGCCGACGGTAACTTCGAGGTGAC
GCTGGCGACGAAAGCGACCCTCAACTACACGGGCAGGGTCGAGTGGAAACCGCCGGCGATTTATAAGTCTTCCTGCGAGA
TCGACGTCGAATATTTTCCCTTCGACGAGCAGACGTGCGTGATGAAATTCGGCTCGTGGACTTACGACGGCTTCCAGGTC
GATCTTAGACACATCGACGAGATCCGAGGCAGCAATGTCGTCGACATCGGCGTCGATCTGTCGGAGTTTTATACTTCCGT
CGAGTGGGATATACTAGAAGTCCCTGCTGTGAGAAACGAAAAATTTTACACGTGTTGTGACGAGCCTTACCTCGACATCA
CTTTCAACATCACCATGAGACGGAAGACTCTGTTCTACACTGTTAACCTCATAATACCTTGCATGGGGATATCATTCCTC
ACGGTGTTGGTGTTTTACTTGCCAAGCGACAGTGGAGAGAAGGTCAGCTTGTCCATCTCGATTCTATTGTCACTGACTGT
GTTCTTCCTCTTGCTGGCCGAGATCATCCCGCCTACGTCGCTCGTGGTTCCGCTTCTTGGTAAATTCGTCCTCTTCACTA
TGATCCTCGACACCTTCAGCATATGCGTAACAGTGGTGGTCCTGAATGTACACTTCCGTTCGCCGCAGACCCATGTAATG
TCGCCGTGGGTCCGACGCGTGTTCATCCACGTTCTGCCGAGGCTGCTGGTAATGCGCAGGTATAATACGCCGACGCAGAG
AACCGATTACGATTCCAGGCAAGATATATTCTTCTGGCATTTGTGGCCCGGTCATTGGAACCACGCCAGAGCGGGCATTA
GAGCACTCATTAGCGTTTCCCGTGCACGTGACATTAGTGTCGCGCCGCAGTACCAAATAGATAGGCGTAGCATGGGCGGG
CATCATGGGCATCGCGTAATGGTCAGAACATGCAATGGTCTCGAACTGCGAGACCCATCACTGTTCGTCGAGTCCTCGGC
CTCGGAGCTGGTCGAGTCCTCCGTGCTCTTTCCTAGTGTCGATTCACGGGACGAGCTGCATCCTCGGGAGTTGGAAGCAG
TAAATTTAGGAAGCACGTGCCGTATCCACGGTTCGCCAGCGGCGACGGCCGCACCGCCGCCGCAGCTTCCGACAGAGGAG
AGCGTTGACGCTCTCTGTAACACGCTTCATCATTGGCATCACTGCCCAGAACTATACAAGGCCATAGAAGGCATCCGCTT
CATCGCCGATCATACGAAGAGAGAAGAGGATTCTACTAGAGTCAAGGAGGATTGGAAGTACGTCGCGATGGTGCTCGACA
GATTATTCCTTTGGATCTTCACGTTAGCCGTAATCGTCGGCACCGCCGGAATTATACTGCAGGCGCCGACCTTGTACGAC
GATCGCATCCCTATCGACGTACGGCTCTCCGAAATCGCCTCCACCACTGCCAAGCCACACATCGTCGCGAGCCTC
PEP: 
>SINV24530-PA
GCSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLKWDPKEYGGVE
MLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQV
DLRHIDEIRGSNVVDIGVDLSEFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFL
TVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHVM
SPWVRRVFIHVLPRLLVMRRYNTPTQRTDYDSRQDIFFWHLWPGHWNHARAGIRALISVSRARDISVAPQYQIDRRSMGG
HHGHRVMVRTCNGLELRDPSLFVESSASELVESSVLFPSVDSRDELHPRELEAVNLGSTCRIHGSPAATAAPPPQLPTEE
SVDALCNTLHHWHHCPELYKAIEGIRFIADHTKREEDSTRVKEDWKYVAMVLDRLFLWIFTLAVIVGTAGIILQAPTLYD
DRIPIDVRLSEIASTTAKPHIVASL
Swiss-ProtAcetylcholine receptor subunit alpha-like
KEGG     K05312     
SUPERFAMILYSSF63712  Nicotinic receptor ligand binding domain-like superfamily     
Gene3DG3DSA:1.20.120.370     
PfamPF02931  Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain     
PRINTSPR00254     
ProSitePatternsPS00236  NEUROTR_ION_CHANNEL; Neurotransmitter-gated ion-channels signature.     
TIGRFAMTIGR00860     

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