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Gene detail [Fasta]

Species Solenopsis invicta
GeneSINV23021
PositionSi_gnF.scaffold05266:659212..693632[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/sinv_10/?name=SINV23021
sequence mRNA:
>SINV23021-RA
ATGGCGGAGGTGGCGACCAAGAAATCGATCAATGTAGTAAGTAGCAAGAAGAACGAAGTGTGCGGTGTTCAGTCTAACAA
CGGTTTGATTGATTTGGATGGTCTAACCGCGAGTAACACCCAACTAATCTCGTTGTGCGACGACGACGACGATATCGTAC
TCACAAACAATACGCGTAATGAGCTCGAAAACGACGACAAGAGTCTGCAGGAGTTGATAGAGAGCGAGCTGGCGCTGAGG
ATCTGCACGAGCGAGAACGATGATGAGACAGTCGAGGAAACCGAGAACGTCGTCGCCCAACCGGAAACGATCAAGAGGAT
CGTCCTGGATCGCCGGCAGGATCCCGTCGACGTTAACGCGGAATTCATAGCGGCCGAGAGCGAGCACTATTCTCTGATCG
AGGAACCGTACGGTCATCGAAACGGTCACGTGTCCCCGCACGTCGACGTGAAACCGGAACCCGTGCACTTCCACGACGAG
GAAGAGGATCGAGCGTTCATCGAGCAGCCGGAAGCCGGCATCGCGCCGGTGATCATTCAGAAAACGAACGAAAACGATCA
GGACTTGAGCCGTGATGAAGCGACCGTCGACGTTGACAACGACAGCGAGGAATGTCAGGCGGTCGTCAAGGAGGCTGCGC
CTCCCAGGGATGATCCAGAGAATGTAACGAACGATCTCGTAGACGGATCGAACTCCCAGTCTTTCCCGAGTTGTCGTCCG
GTGGATAAACACCAACGGGAAGAAGAGCTGATACAGAAGATGACCATGCCGGACGACGCGGATCTCCTTCGCGCCGACGT
CGAGGAAAGGAAGAACGTGGACGACGACATTCCAGACACGTGGACTGAGCAGGCGCCACTTTCGGATGGTCAGCAGGCCG
ATCAGTTCTCCGACAACTTCAACGAGGCGCTCTATCCGCAGGATCGAATCCTCAAGGAGCAGAAATTCCCTTCGACGAAT
GAAGAGTCTTCCACAAACGAACATATCGATACGCTTAATGATTCCTACAATCGTATTGAAGAGGAGGAGGAGGAAGAGGA
GGAGGTGGAGGAGGAGATTCTGGCATCGCTGATCCGCCGGGACAAATCGTCACCCTCTAAAACTATCGAAGAGACCCATT
CTCGCTTTTCCGACGACTGCATCATCAGCCAGTCCGAGATATCCGCGGAGATGGCCAGCACGCAAGAGTTTCTCGACATA
GAACGCCGCGTGCTGAACGAAGAGGCCGATCAACAGGAGGCACCGCGGATCGTGATATCGTCGGAGATCACCACCGAGGC
GCAGACAATGCCGGGATCGGTCCTGGAGAACGAATCGCCGGAGTGTCCCGTCGCGGAGGACACGCAGAACCCGGCGGACG
AGTCCTCGAGCGAACTCTCGGCGTCGGATTTGACTTTCATCGAGAAGACCGAGGTCGTGGTGTCGGACACGAGCGTGACG
ATCTTCTCGGAGACGAGGCAACTCGTCGCCGAGCAGATTGGGAACCTCGACTCGTGGACCACGGTCGAGGAGGCCACGAA
ATCGGCGGACGCCGAGGAGCAACGGCGGGGGGACGCGACGGCGACGGCGACGGCGACGGCGACGGCGACGGAACGCGACG
CGGTTAATGACGCGACGAGGGACGATAATGAGGGAAAGCAAGACGATTGCCTCGCACCCTCGTCCCCCCGCGCGCCCCTG
GCCACGCCGGACGAGACGGAGACGAGCGATGTTTCTAACGCCTGCGACAGCGAGAGCCGCGAGGAAACAGTGACCACCAG
TTCCAGCGTGGTGACCTCCTCGAAGGGTGGGACCAAAACGAAAAAGAAGAAGATCGAGGGCGTCGCTGGTAACGATGCCA
CCTCGCCGAACCTTACTCCGCGCACAAAGAAAACTAAGAAGAGCAAGAAAAGCGATCTCGAGAAGGAGAACATCTCCGTG
AACTGTAGCTTACGAGACGCAAGCATGCATACGGGCACTCGGCGATCGCATTCGGAGATGATCGATTTTTCCGACGAGGA
CGATTTATCGAACGTCAATGTTAAGTCACTGGTAAGCTCCGAACGTATCCGCATATGTTGCCGCATGTCGCATACTGATC
CGCCTGCATTTTTGTTCTTCTTTTTGCGCACGCAGACACAGAATTATGTCTCGGAGACGAGTCGTAGCGATCAGGAGAAG
CTGTGCAGGGAGCGGATTGCGACCGGCGTCTCCATCAAGCAATTATGTCGCAGCTTTGGCGACATCTCGAACATGAGCGA
CGGCGATCAGGCGACTTTTGGGAAAGCGAGCCACTCGATGGAAACCGAGGAGAAGGCGAGGTCGATGGGTGATCTGAGAT
TATGCGAGCAGGGTTACTCGCGGTTCACCAGAGACGCACTCGTCTTCGCCAGGGTGTCGGTCAAGGCCCTCAGGGCTTCC
TACTGTAGTTTGGCAAGCTTAACGAACGAGGGTAAGGACAAGGATCTGGCATGCGAAAGGCCGAAGCTCGAGAAATCGAG
CTTTAACAAATTCGACGCTCTTACCAAGAAGACAGTTCTGCACGTGCGTTCGGTCGATGCGGGAAAAGTCCAACAGCAGC
TAAATGCCGTGGGCCAGAATGCCGATGCGAATACGAATTGTCGCAGCTGCGGCAAGGTCGTGTTCCAAATGGAGCAGACA
AAGGCCGAGGGCCTGGTCTGGCACAAGAATTGCTTCCGGTGCGTGCAGTGTAGCAAGCAGCTCAACGTGGACAATTATGA
GAGCCACGAGAGCACGCTCTACTGTAAGCCACATTTCAAGGAGCTCTTCCAACCGAAACCGGTCGAGGAGTCGGACCAGC
CCGTGCGACCTCGAAAGCCGGAGCTGATCATACGGGAGAACGAGCCGAAAGAGCTGCCGCCCGATGTGGTCAGAGCTTCC
GACAAACCCGATCTGGGACTCGAGGAACTCTCAAGTTTGAACGTCAAGTCGCGCTTCCAGGTCTTCGAGAAAGCCAGCAC
GGAGGGTGCCAATGAGATTGAACGATCACCGTCACAGATCGCCGTCAAGAGATCGCCCAGCATCCTCAGCAAACTGGCCA
ATCCGTCTGTGCGGAGTGTCTGCAACTGTGCTACTGCGCATGTTTTCTTATCCAGATTTCAGGCGAAAGGCATGGATATT
GGCGTGGCGGACGAATCTCTCAATGGCATACCCTACGAGGAGTCCAGCGAAAGTGAGGACGAAGAGGAAACGGAAGAAAC
CGAAGAAGTGGAAACCGAAATCGTAAAGTCAAAACGCACCACGCGCGAACGACCGATCAGTTTTTCGAAGATGGACGACA
TCAAGAATCGTTGGGAGACCACCAGCCAACAGGGAAGGCGCGAGGTCCAGCGTGAAGCTAGGAAGGAAGAAATCGCAGGA
ATCCGCTCGCGACTGTTCTTGGGTAAACAGGGTAAAATGAAGGAGATGTACCAACAGGCGGTAGCCGGAAACGACCGCGT
TACGAAGATAAACGCGGCGGAGGAGATCCAACACTCGACTACCCACGCTCGTTCGCTCAAAGAGAGATTCGAACGGGGTG
AGCCAATCGCGGCCTCGGACGACGAAACCGACAGTAAACCGAAACCGGAGAAAGCCGACGAGGAGGTGATCGCGGCAGAA
GACTGTGTTAAGAGGTATCAGCAGGAAGTCGCGGTCGCTCTTTTTGGAACTGGACGCCACTGCAGCGAAAACAGCACGTC
CAGTGACGCCAGTCCATCCGCCAAAAACGCCAACCGATATCCCACGACGTGCGCGAGACTAACGCGTCTGGTAACGATAA
TTTCCGAAACATTTGCGAGAAAGGCGTTCATGGGCCGTCAAGTCTCAGACGATGTGGTGCGCAGCTCAGACACGACTGAG
GAGGTCCAAGTAGAAACGTCGGAAATTTCAAACAAGTTCAAATTCTTCGAGACCTATAAGGAACCGGAGAAAAAGCGGAA
GCAGTTTCGCATTACGCCGCCTCGCGACGGTCAAGTCAAGGTTCGACCCGTCGACTTTGGTATGGATTCACCGGATCGCG
AGATTTACCGCGATCCAGATGTGGTCAGAGCCGACGATAGGGTGGACGAGGTGGTGCACACGGACACGGCGAGGAAGATG
CTGTCCATCTTCCGGCAGATGGAGGAGAAAGCGTGCAAGGAAGAATTGCCGGAGGGCCCGAAGCCCTTGAAATGCTTCAC
ACCGCCCCCCGAGGATAAGTTCGCCAAAGCGTCGGCCTCAGACGCAGAGGACGGCGAGGACGAAGAGGGCGAGGAAAGCG
ACGGTGACGAAAGCGCCGAGGAGAGAGATCCTAATTACATCCGTTCCTCTGACAAGGTGGAGGACGAGTTCTTGAAACAG
GCGCAGAACGCGGCGCGCGCCAAGACCCTACGTGCCAAGTTCGAGCACTGGGAGGAGACCGACGGTAAAGTCAGCAATCA
CCACGTTGCCGAAATGGAGATGGCCCAGGGTACGGGCGAGCAGTCCAGCATAGAGTCGGCGAGCAGTCTGAGGGCCCGTT
TCGAGTCCCTCGGCTCGCAGGCCAACGAGTCCCCGCGCGCACCGAAGGTCAAAGTCAATCGATTTGTGGAGATCCAGACG
ACCTGTACGGAGGTGTGCGAGAGCTGCGAGAAGAAGGTCTACCCCTTGGAGAAGGTCGAGACAAATAACAAAATCTTCCA
TAAGCAATGCTTCCGGTGTCTCCAGTGCAATTGCATTTTAAGGATGGACTCCTTCACTCTGAATAACGGCAAGCTGTACT
GTATCCCGCACTTCAAGCAACTCTTTATCACACGGGGAAATTACGACGAGGGCTTCGGCGTCGATCCGCACAAGAATAAA
TGGGCCTCGACGAACTCCAGCAACTCCACGAGCCCGTCACCGATCGCGGTCTCGAACGGCGATCTC
PEP:
>SINV23021-PA
MAEVATKKSINVVSSKKNEVCGVQSNNGLIDLDGLTASNTQLISLCDDDDDIVLTNNTRNELENDDKSLQELIESELALR
ICTSENDDETVEETENVVAQPETIKRIVLDRRQDPVDVNAEFIAAESEHYSLIEEPYGHRNGHVSPHVDVKPEPVHFHDE
EEDRAFIEQPEAGIAPVIIQKTNENDQDLSRDEATVDVDNDSEECQAVVKEAAPPRDDPENVTNDLVDGSNSQSFPSCRP
VDKHQREEELIQKMTMPDDADLLRADVEERKNVDDDIPDTWTEQAPLSDGQQADQFSDNFNEALYPQDRILKEQKFPSTN
EESSTNEHIDTLNDSYNRIEEEEEEEEEVEEEILASLIRRDKSSPSKTIEETHSRFSDDCIISQSEISAEMASTQEFLDI
ERRVLNEEADQQEAPRIVISSEITTEAQTMPGSVLENESPECPVAEDTQNPADESSSELSASDLTFIEKTEVVVSDTSVT
IFSETRQLVAEQIGNLDSWTTVEEATKSADAEEQRRGDATATATATATATERDAVNDATRDDNEGKQDDCLAPSSPRAPL
ATPDETETSDVSNACDSESREETVTTSSSVVTSSKGGTKTKKKKIEGVAGNDATSPNLTPRTKKTKKSKKSDLEKENISV
NCSLRDASMHTGTRRSHSEMIDFSDEDDLSNVNVKSLVSSERIRICCRMSHTDPPAFLFXFFLRTQTQNYVSETSRSDQE
KLCRERIATGVSIKQLCRSFGDISNMSDGDQATFGKASHSMETEEKARSMGDLRLCEQGYSRFTRDALVFARVSVKALRA
SYCSLASLTNEGKDKDLACERPKLEKSSFNKFDALTKKTVLHVRSVDAGKVQQQLNAVGQNADANTNCRSCGKVVFQMEQ
TKAEGLVWHKNCFRCVQCSKQLNVDNYESHESTLYCKPHFKELFQPKPVEESDQPVRPRKPELIIRENEPKELPPDVVRA
SDKPDLGLEELSSLNVKSRFQVFEKASTEGANEIERSPSQIAVKRSPSILSKLANPSVRSVCNCATAHVFLSRFQAKGMD
IGVADESLNGIPYEESSESEDEEETEETEEVETEIVKSKRTTRERPISFSKMDDIKNRWETTSQQGRREVQREARKEEIA
GIRSRLFLGKQGKMKEMYQQAVAGNDRVTKINAAEEIQHSTTHARSLKERFERGEPIAASDDETDSKPKPEKADEEVIAA
EDCVKRYQQEVAVALFGTGRHCSENSTSSDASPSAKNANRYPTTCARLTRLVTIISETFARKAFMGRQVSDDVVRSSDTT
EEVQVETSEISNKFKFFETYKEPEKKRKQFRITPPRDGQVKVRPVDFGMDSPDREIYRDPDVVRADDRVDEVVHTDTARK
MLSIFRQMEEKACKEELPEGPKPLKCFTPPPEDKFAKASASDAEDGEDEEGEESDGDESAEERDPNYIRSSDKVEDEFLK
QAQNAARAKTLRAKFEHWEETDGKVSNHHVAEMEMAQGTGEQSSIESASSLRARFESLGSQANESPRAPKVKVNRFVEIQ
TTCTEVCESCEKKVYPLEKVETNNKIFHKQCFRCLQCNCILRMDSFTLNNGKLYCIPHFKQLFITRGNYDEGFGVDPHKN
KWASTNSSNSTSPSPIAVSNGDL
Swiss-ProtLIM domain and actin-binding protein 1
SUPERFAMILYSSF57716  Glucocorticoid receptor-like (DNA-binding domain) superfamily     
Gene3DG3DSA:2.10.110.10     
PfamPF00412  LIM; LIM domain     
SMARTSM00132     
ProSiteProfilesPS50023  LIM_DOMAIN_2; LIM domain profile.     
CoilsCoil
ProSitePatternsPS00478  LIM_DOMAIN_1; LIM zinc-binding domain signature.     

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