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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO006727
PositionSeq_1101853:122486..126540[GBrowse]
sequence mRNA:
>DPO006727-RA
GACTAATGGCGCGAATAGGTTAAGTTACAGTAGTTGCAAGAGTTCCAAAGAAAACGTTGAAATTTCCAGCACTTGGAGCT
GATTTTCAATGAAAATTATACACGAGCCACTGCGGTATGCCCATGAGGAAGGGCATACAGATGTGTGTTATTCTGCAGAT
GGAGAGCACTTTATCACCTGTGGAGCTGATGGAGATGTTCGGATATGGTCAGTGGATGAAATGGACGATCCTAATCACAC
ATGTGTGGGCGAATTGGCTCTAAGCGTGTGCCAGAAGGATGATAAAATTTACACTTCCACTGGAAACAATGAAATTCAAA
TTCTCACACATCCAGCAGGGGAACGAGATGGAGTGTTCACCAGGGCTACAGATCCTTTTAATCAGATTGTGATTTGCAGG
AACAAGAACTTTGCAGCCGTAGCAGGCGAAGGCATGTCTGTAACTGTAATGGACCTGGATACTTCAGTAGCAAAGATTTC
TCTAAGTGATTTAGGAGCGCCTTGTTTAAGTGTAGCGATTTGTCCCAATGCGGCCAAACTGGCTGCCTCCACTGGAGACG
GCAAGTTGCGCATTTGGGACGTGGAATCCTACTCTCTCCTCAAGGAAATATCCTGTTTTCCTAAAGTCAATAGCTTTGCA
AACGCAAAAAATTTGTGTCGTCTGGATTTTGAACCAAAGCACGGCGAACTGTTGGCTTATCCCCTGAAGAACGTGGTGAA
ACTTCTCAACACAACTACATGGGCGGAAGAGGAACTAAAATGTCCAGAGGTGGCTGCAGATTTCTCAGTGTTACAGTATT
CAAGCTGCGGCAAGTATTTAGCAGCAGCTTCACTTAAAGGCGACTTTGTGATATGGGAGACATTAAAGAAAACAGTCTTT
CAGACTTCAAAGCACGATGCATCGAATGCTATTTGTGGACTTATGTGGAATCCTAAAGGAAATGGGGAAATTGTCTATAC
AGACGTGGAAGGCCAGGTCAGTATCATGTCCAACTGCTCAAGACTGCAGCCTGTCGATAACGAGGAAATATCGACCGAAG
TGGAAAAGGTTGATGAAAACGGCTTCACAGAGAACGATGTCGATTTTGGCGATTTTCTGGAAGAGGAAAAGAACGAAGAC
ACTGATCGAGCCTCGCCGGAGGTTCTAGATTTTGGCACCCTTGACACTTCATCTCCAGGCAGCACGAGAAGACCGCGAAC
TCCAGACGTTCCAATGCAGTCGCCCTTTATGCCTACATCCACTCCAGAGCATCTGGATCCTCGATACCTCTGCTGGAATG
ATGTGGGAGTCGTAAAAGGCTACGGGCTAAACTCGGGAGACGAAGCAAACCAGAAAACCATTGAAGTCGAGTTCCATGAC
TCCACTTTCCATAACAGCATGATGCTGCAGAATTTTCAGGACTACACCATGGGTTCAATTGGAAAAGGAGCTCTAGCGGT
AGCCAATTCTAGCCAAATCATGGTGATTCCGCTGGCAGTCAGCAACAAAGAGTGGTACTTAAAAGTGGAGGAGTATGAGG
AAATAGTGCTGGTGGCAGCCTCCGAAAGTATGGTCTGTTTTGCCATGTCCAACTATCTAGTGAGAGTTGCCACGATTTTT
GGGACCCAGAGAGGGATAGTGTCCGTGCCTGGACCTCCTGTGTGTATGGCGGCGTTCAAAAATGCCTTACTAGTCGCTTA
TCATGCCGGTCCAGTGAGAAACAGCGACCAAAACATCATTATAAAATTATTCAAGTTTGAAGGCCTGAACGTGGACTGTT
TCGAGCTGGGGTCGGCTTTAGGCCCGGAATCTACGTTATATTGGCTAGGATTTTCTGATATTGGCACACCAGGAATGATG
GATTCTTTGGGGATGCTCAGTCTTTTCCCTCCAAAGTGCAACACTTGGATTCCTTTCTGTGATACCACTAAGCATCGTAG
AAGTCCAGGCGATGGATTTTTCGTAACAACAATATTCGAATCGAATCAAACAATTGGCGGAATCCGTTGTAAAGGGACGG
TTTATCCGGGCTTCGTACCGCGGCCCACGGTGTGTGAGCTCGCCATTGAGCCCCCATTTGCTGAAACCGCGACCGATAAA
ACCCAGATGGAAATGAACATGTTCACGTGGTCGAACTTGAACATCCAGGATACGGAGCGGAAATATAAAGAGACTGCCTT
GAAAATTTTTGCGCTGGCCTGCAAAAATGACCTGGATCAAAGAGCGTTTGAGTTCATGCAACTGGTGGGCAATCAACAGA
TTTTGAACTTGGGGCTGAAATATACCACGAAATTGAACAAGAGGAGACTGAGTGAGAAGCTGATGGATTTGGCTGCAGTG
CTGCAGGAAGAGAATGGAGATGCCGATGACACTCCCAAGTCGTTTCATAGCGTGGTTTCAACGACTGAAATGCAAATGCC
TGCGCAAGCAGTAATTAAGCCCAGAGTGGGGAAGCTGAGCATCTCGAAACTAACGCCCAAAACCAAGAAGACCAAACAAG
AGGGAAGCCAGCAAGATTTTGAAACGAATACGCCCATTAGCAATGAAAACAATCTTTCAGCGGTTAACAGTCAGGATTCG
CTTTTCAGCGAAGATCAGTCGGTATCGGATGAAACTCTCAAGGCCTATGAAGTTGTAGAAGTACCGCGAAACCCGTTTTT
AAAAAAGCAGCCAACAGAAAAGGCGAGAGACGACTTAAATGAGACCAAAAGTCTCACCCCAATATTTAATCCATTTTTGA
AGAAGGCAAAGAAAACGGGCAGCGCTAGTCCCTTGAGTTTAACAGACAAGAATGCGGGAATCAGTTATGAAACGCCCGAC
GCCAAACAGAAAAGTACTGAGGTTGGAGAGAAGAGAAGATTGGCGGACGCCGAATCGGAAAAGCCAGTAGGAAAACAGCG
AAAACTCAACCAATTTATGTTTTCCAAACGACAATGAAAATGAGTAAGTAAGTGGGTACAGAATAAATTATTTTTTTACT
ATCGTTTAATCTTTGATATTATGGAAGACAAGGGTGGAAAAAATAAACGGTGAACCTTG
PEP:
>DPO006727-PA
MKIIHEPLRYAHEEGHTDVCYSADGEHFITCGADGDVRIWSVDEMDDPNHTCVGELALSVCQKDDKIYTSTGNNEIQILT
HPAGERDGVFTRATDPFNQIVICRNKNFAAVAGEGMSVTVMDLDTSVAKISLSDLGAPCLSVAICPNAAKLAASTGDGKL
RIWDVESYSLLKEISCFPKVNSFANAKNLCRLDFEPKHGELLAYPLKNVVKLLNTTTWAEEELKCPEVAADFSVLQYSSC
GKYLAAASLKGDFVIWETLKKTVFQTSKHDASNAICGLMWNPKGNGEIVYTDVEGQVSIMSNCSRLQPVDNEEISTEVEK
VDENGFTENDVDFGDFLEEEKNEDTDRASPEVLDFGTLDTSSPGSTRRPRTPDVPMQSPFMPTSTPEHLDPRYLCWNDVG
VVKGYGLNSGDEANQKTIEVEFHDSTFHNSMMLQNFQDYTMGSIGKGALAVANSSQIMVIPLAVSNKEWYLKVEEYEEIV
LVAASESMVCFAMSNYLVRVATIFGTQRGIVSVPGPPVCMAAFKNALLVAYHAGPVRNSDQNIIIKLFKFEGLNVDCFEL
GSALGPESTLYWLGFSDIGTPGMMDSLGMLSLFPPKCNTWIPFCDTTKHRRSPGDGFFVTTIFESNQTIGGIRCKGTVYP
GFVPRPTVCELAIEPPFAETATDKTQMEMNMFTWSNLNIQDTERKYKETALKIFALACKNDLDQRAFEFMQLVGNQQILN
LGLKYTTKLNKRRLSEKLMDLAAVLQEENGDADDTPKSFHSVVSTTEMQMPAQAVIKPRVGKLSISKLTPKTKKTKQEGS
QQDFETNTPISNENNLSAVNSQDSLFSEDQSVSDETLKAYEVVEVPRNPFLKKQPTEKARDDLNETKSLTPIFNPFLKKA
KKTGSASPLSLTDKNAGISYETPDAKQKSTEVGEKRRLADAESEKPVGKQRKLNQFMFSKRQ
Swiss-ProtWD repeat and HMG-box DNA-binding protein 1
KEGG     K11274     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50082  WD_REPEATS_2; Trp-Asp (WD) repeats profile.     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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