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Gene detail [Fasta]

Species Tribolium castaneum
GeneTCOGS2:TC005832
PositionChLG8:8445954..8455863[GBrowse]
sequence mRNA:
>TCOGS2:TC005832-RA
ATGACGTCGAGCAGGTTGGACAGACTGTTTGTACTTTTGGAGACGGGCAGTTCGGCGGTGACTCGAACCGCCGCGGCCAA
ACAACTGGGGGAAGTACAAAAATTGCACCCCCATGAATTGACCACGTTACTGACCCGAACCGCGACCTATCTCAGGTCCA
CCAACTGGGAGACGAGAATTGCGGCCGCGGAAGCGGTCAGGGCAATCGTCAGCAATGTGCCCCCGTGGGAACCCCGGCCC
GGCCCTGAGGACGAGCCTCAAACGCCTCCTTTGTCAACGGTGGGCCGCTTACGTTTCCACCAATTTGACATGGACAAAGT
CCTCAAAAACAGCACCCACTTGATGGCATCGGAGGGCAAAGAGTTCGACCTCGAGGAGGATTCATCGACTGATATTCGTG
AAAAAATGGCCAAACAAAGGCAAATTCTAAATGCCAGGTTGGGTCTAGAGGTGGCTGGACGTTTCGGAATCGATACATCC
AACTTATTCAGTAATGAGGATTTGATTGTTTCGATGCCGGATAATTGTGAAAAAAATAACGAAATTTCGAGAAAACCTCT
TCGCGATTTGATTTCTAGCGTTAGCGAAGGATTGAGTTCGCGTGAAATGAATCGCGCGAAAAGGAAAGCGAGACAAGCGG
TGTATAAACAAAGATCGCGCGATCCGGAAGAAACGACAAGCAATGGAGACGAACCTGAGAAAAAACGAATTAAGATCGAA
GTCAAAGACGAAAGTAACAGCAGCATGGATGTGCCGGAAATTGACCTCGACTCTGGCGACTGGCCCCTCGAATGGTTCTG
TGATTCCCTCAGCCAGGATCTATTCAGTTCGAGTTGGGAAACTCGTCACGGTGCCGCTACAGCCCTTCGTGAAATAATCA
CCGTCCATGGGCGCGGCGCCGGCAAGAGTACCAACCTAACCGCTCAACAAATGCAAGAATGTCACCAAATTTGGCTCGAG
GACATGGCAATTCGCTTACTATGCGTACTAGCCCTTGACCGTTTTGGTGATTTTGTTTCGGATGCTGTGGTAGCACCAGT
TCGTGAAACATGTGCACAGAGTCTTTGTGCCGTTTTGAAACTAATGGAAGAGAGTGGTTGTAAAGGTGCTTTGAAAATCT
TACTCCAATTGTTGGGCCATCAAGAGTGGGAAGCTAGACATGGGGGTCTTTTAGGACTCAAGTATTTACTAGCTGTTCGC
GAGGATATGGTCAATACGTTACTACCGGAAGCTTTTCCGTTTATACTTCAAGGATTGTCCGATCATGTTGATGATGTCGC
TGCTGTTGCCGCCTCGGCTTTGATTCCGGTTACGGCAAAGTTGGTACGATTGGTTCCCGAGGCGGTTCCGATCGTTGTGA
CGAAATTGTGGGATTTGTTAGCCGAACAGGACGAACTTGCAGCGGCGTGTAATAGTTTTATGGGTCTTTTGGCCGCCATT
TTGAACCTACCAGAAGCCCAACAGTTGCTACCACCACAACCATTGAATGAGGTTGTGCCGCGGTTGTGGCCTTTTTTGAG
TCATAGTGCCTCGTCTGTGCGTAAAGCGACGCTACAAACGTTGGGCACTTTGACTGAGAGACCCATCGATGGGTCCCCCA
TAACATGGGAGGCTCAGTTGTTACAAGACGCCATGAGGCACGTGTACCAACGTGTCTTGGTGGAACCACAGAGTGATGTT
AGGGATGTTGCTGAACATGTTTGGAAACAACTAGTCGAGAACTCCGGTTTGGTTGAACTGTTACATGCCGCATGTCCTTT
TATAACCTATTGGTTGTTTCTGAGTATGCAGTCGACGAAAGTCGCGTTTGATCCGAATTTTCTAATACATGCGAAAAGCC
ATCGGAAGAAAACCAGCGATGGTTTGCATAATAATTTCGACCACGTCGTGGTCATGCCTAAGTGTTTTATTGGTGGGACT
GAAACCACGCCATTGGCCACTCGTGAAAGTAACGCAGTCCAAGTCAGATGCATGACAGCCCGAATGTTGGGACTTTTATC
TTGTTACATCATTAAACCGGCCCCTGGAATCGACTACAGTGGCAACATTGAAAAACCGATCGAATGTTACGAGAAAGTCC
TTCTCGTTCATTTAAATTCCAAGTCGGCGTTGCAACGTACAATGGCCGGTTTGGTTATAGCCGAATGGGCCGAACGTGAC
CGTGAAACCCCGACTTGTCCCGAAGGTTTGAAAAAACGCCTCCACGACTGTCTCAACGAACGCGTCTATTTCGACGAAAT
CGCCCTCAGTTTCACCCGCCTGACGCAGGAAACGCGTGACTTTATGGCAACTTTAAAGCACTACAAAGTCCCAATTAACA
CCACCGAGAACGATAGTGTATTCACCTTGGAACGCATCCAGGAACTAACCGGCCCGACAACTCAGGAGATTCTAGTCAAA
ATCAAGCTCAAAACAAAAGTGCAGGAAAGTCTAGAAGAGCGAAGACGCAGCATACAGAACAGTGTGGTGCAAACAAGCAA
CGATCAGTTGACTTTGAGCGTCAGCACGTTGGCAGCACTGGCCGGCGCCACCGTCATGTTCAAAGCCCTCCCAGAGAAGC
TCACACCTGTGGCGAAGCCACTTATGGAATCGGTCAAACGTGAAAGTGACGAAAACCTCCAAAAAACCACCGCCAAACAT
TTGGCCCATCTCCTGGACCAGTGTCGGGGACGTTCGCCGTGTCCCAACGACAAGATTTTGGTGAATTTGTGTACGTTTTT
AAGGTGCGACCCCGAATTTACTCCAGTTATACACAAGCAACAAGCCAATAACAGTGCCGAGTTGGGTTGGACCAAACCGG
GGAATTACAACGGGATTGTAACCTTGAACAACCAACAAAAGGACGCGGAACGGGCGGCGTTCCGGCGCTCGAATTCGACG
GGACGCGGCCCCGGGCGCCCCCCCGCCACTGACATCCCCCTGGATGAGTTATTCAAGGAGGAGGATGAAAACCAGAAGAT
CAATCGGGTGCAAAGACGCGGCGCTACGTTGGCTTTAGTGGCGGTCACGTCCTACTTTGGGGAGGAATTACCCGAGAAAA
TCCCCAAGTTGTGGGAACTAATGGTGGGGCAGTTGTGCGAGACCATTGATCCGCAAAATTTCGATGCCAAAAGTTGGTAC
GAGAAGGACGACGAGTCGGAGCGACTTGTGTGGGCTTTGCAAGTCCTCGAAGTCACTTCATCAAGTCTCCATGCCAGTCT
AAGGCCACTCCTTATGGAGAAAACCTTGAAACGGTTGTGCGTCCTACTGTCGCATCCGTACCGAGCTGTGCGCCATCTGG
CGTCACGGTGCCTTGCCGTGTTTGCCAAATTGGACTCTGTTCGTGTTATGGAGGTGATAGTGGAGACGGTTTTGCCCAAA
CTGGGGGCCATCGATTGTGATATAGACCGGCAAGGGGCCGTTGAGGCCATTGCGTGTATTATTGAAACCCTCCAATTTGA
TATAATACCATACGTTGTCCTGTTAGTGGTCCCCCTTTTGGGGCGCATGTCCGACCAAAACAAGTGCGTGAGACTGATGG
GGACGCATAGTTTCGCCACGTTGGTACAATTGATGCCGCTAGATGGCGGTGTGCCCGAACCGCCATCTTTGAAAGGCAGC
ATTTTGAGTGAGCGGCGTGACCGCGAGAGGGAGTTCCTAAAACAATTGCTTTCGCCAACTACGATCCCCGATTATGTGGT
CCCGGTACCAATCGCCGCCGAGTTAAGGAGTTACCAACAGGCTGGTGTCAACTGGTTGGCGTTCCTAAACAAGTACAAGT
TGCACGGAATTCTGTGCGACGATATGGGTTTAGGGAAAACAATCCAGAGTATTTGTATGTTGGCAGGGGATCATTACTAC
CGTGACCAGAAGTATAAAGAAACAAAGTCGGCTGATTGTGCCCCGCTACCGTCACTTGTCATTTGCCCGCCCACTTTGAC
CGGGCATTGGGTCTACGAAGTTGAGAAGTTTCTATCACACAAGTACCTCAAACCGTTGCAATATAACGGCTCGCCAACGG
AACGCGAAAAATTGAGACACAAATTCAAAAAACACAATTTGATCGTAGCCTCCTACGATATAGTCCGCAAGGATATTGCA
GTTTTTAGCAACATTAAGTGGAACTATATTATTTTGGACGAGGGTCATGTGATTAAAAACGGCAAGACGCGGACTAGTAT
GGCGATTAAGAATCTCGTGGCCAACTATCGACTCATCCTGAGCGGTACTCCGATCCAAAATAACGTGTTGGAGTTGTGGA
GTCTTTTTGATTTTCTTATGCCGGGTTTCCTGGGCACGGAAAAACAGTTTACGGCGCGGTACTCGCGTCCCATTTTGGCG
AGTCGTGACCCCAAGTCGCTGCCGAAGGAGCAGGAGGCGGGAGCGTTGGCTATGGAGGCGCTGCATCGGCAGGTGTTGCC
GTTTCTGTTGCGGCGTGTCAAAGAGGATGTTTTGGATGATTTGCCGCCGAAAATTACGCAGGATTATTATTGCGAGTTGA
GTCCGCTTCAGGAGAGACTCTATGAGGATTTTTCCAAGTCGCAAGCGCATCAAACATTACAGGAATCTATCTCGTCGGGG
GCTACGGCCAGTTCGATGCAAGGCAACACTCATATTTTTCAAGCTTTGCGTTATTTGCAAAATGTTTGTAATCATCCGAA
GTTGGTGCTGAATGCTAGTCATCCGCAGTATGGGAAGATTTTGGCTGATTTGCAGACGCAAGACTCGAAGTTGGACGATA
TTAGTCATTCGGCAAAGTTGCCCGCTTTGAAGCAATTGCTGCAGGACTGTGGAATCGGTGTAACCGAACCGCAATCTACC
GAACTCGTGGTGAACCAACACCGAGCGCTCGTCTTTTGTCAACTTAAAGCAATGTTGGACATCATTGAGAAAGACCTTTT
CAAGAAACATATGCCAGGTGTGACGTATCTCCGTCTCGACGGTTCCATTCCACCCAGTCAACGTCATTCCGTGGTCACTC
GATTCAATAACGATCCATCAATTGATGTTCTTTTATTAACAACACAAGTTGGAGGTCTCGGCTTGAATTTAACTGGAGCT
GATACGGTGATTTTTGTCGAACACGATTGGAATCCAATGAAAGATCTCCAAGCCATGGATCGAGCACATCGTATTGGTCA
GAGGAAAGTTGTGAATGTGTACAGATTGATAACGAGGGCGACTTTGGAGGAGAAAATCATGGGTTTGCAGAAGTTTAAGG
TCCAGACGGTCAATACGATCATCAGTGGGAATAATAGTAAGTTGGAGACGATGGGAACGGATCAGTTGTTGGACCTGTTC
TCGCATAAACCGTCCAATGCCGGAAGTAATGCAGGAGATGGGGGCGGAAGTGGGAGTGTCAAGGCCATTTTAGAGACGTT
GCCCGAACTGTGGGATCAGAAGCAATATGATGATGAGTACGACTTGTCGCAGTTTATTTCCAAGTTGAATTGA
PEP:
>TCOGS2:TC005832-PA
MTSSRLDRLFVLLETGSSAVTRTAAAKQLGEVQKLHPHELTTLLTRTATYLRSTNWETRIAAAEAVRAIVSNVPPWEPRP
GPEDEPQTPPLSTVGRLRFHQFDMDKVLKNSTHLMASEGKEFDLEEDSSTDIREKMAKQRQILNARLGLEVAGRFGIDTS
NLFSNEDLIVSMPDNCEKNNEISRKPLRDLISSVSEGLSSREMNRAKRKARQAVYKQRSRDPEETTSNGDEPEKKRIKIE
VKDESNSSMDVPEIDLDSGDWPLEWFCDSLSQDLFSSSWETRHGAATALREIITVHGRGAGKSTNLTAQQMQECHQIWLE
DMAIRLLCVLALDRFGDFVSDAVVAPVRETCAQSLCAVLKLMEESGCKGALKILLQLLGHQEWEARHGGLLGLKYLLAVR
EDMVNTLLPEAFPFILQGLSDHVDDVAAVAASALIPVTAKLVRLVPEAVPIVVTKLWDLLAEQDELAAACNSFMGLLAAI
LNLPEAQQLLPPQPLNEVVPRLWPFLSHSASSVRKATLQTLGTLTERPIDGSPITWEAQLLQDAMRHVYQRVLVEPQSDV
RDVAEHVWKQLVENSGLVELLHAACPFITYWLFLSMQSTKVAFDPNFLIHAKSHRKKTSDGLHNNFDHVVVMPKCFIGGT
ETTPLATRESNAVQVRCMTARMLGLLSCYIIKPAPGIDYSGNIEKPIECYEKVLLVHLNSKSALQRTMAGLVIAEWAERD
RETPTCPEGLKKRLHDCLNERVYFDEIALSFTRLTQETRDFMATLKHYKVPINTTENDSVFTLERIQELTGPTTQEILVK
IKLKTKVQESLEERRRSIQNSVVQTSNDQLTLSVSTLAALAGATVMFKALPEKLTPVAKPLMESVKRESDENLQKTTAKH
LAHLLDQCRGRSPCPNDKILVNLCTFLRCDPEFTPVIHKQQANNSAELGWTKPGNYNGIVTLNNQQKDAERAAFRRSNST
GRGPGRPPATDIPLDELFKEEDENQKINRVQRRGATLALVAVTSYFGEELPEKIPKLWELMVGQLCETIDPQNFDAKSWY
EKDDESERLVWALQVLEVTSSSLHASLRPLLMEKTLKRLCVLLSHPYRAVRHLASRCLAVFAKLDSVRVMEVIVETVLPK
LGAIDCDIDRQGAVEAIACIIETLQFDIIPYVVLLVVPLLGRMSDQNKCVRLMGTHSFATLVQLMPLDGGVPEPPSLKGS
ILSERRDREREFLKQLLSPTTIPDYVVPVPIAAELRSYQQAGVNWLAFLNKYKLHGILCDDMGLGKTIQSICMLAGDHYY
RDQKYKETKSADCAPLPSLVICPPTLTGHWVYEVEKFLSHKYLKPLQYNGSPTEREKLRHKFKKHNLIVASYDIVRKDIA
VFSNIKWNYIILDEGHVIKNGKTRTSMAIKNLVANYRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFTARYSRPILA
SRDPKSLPKEQEAGALAMEALHRQVLPFLLRRVKEDVLDDLPPKITQDYYCELSPLQERLYEDFSKSQAHQTLQESISSG
ATASSMQGNTHIFQALRYLQNVCNHPKLVLNASHPQYGKILADLQTQDSKLDDISHSAKLPALKQLLQDCGIGVTEPQST
ELVVNQHRALVFCQLKAMLDIIEKDLFKKHMPGVTYLRLDGSIPPSQRHSVVTRFNNDPSIDVLLLTTQVGGLGLNLTGA
DTVIFVEHDWNPMKDLQAMDRAHRIGQRKVVNVYRLITRATLEEKIMGLQKFKVQTVNTIISGNNSKLETMGTDQLLDLF
SHKPSNAGSNAGDGGGSGSVKAILETLPELWDQKQYDDEYDLSQFISKLN
Swiss-ProtTATA-binding protein-associated factor 172
KEGG     K15192     
SUPERFAMILYSSF48371  ARM repeat superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF00271  Helicase_C; Helicase conserved C-terminal domain     
SMARTSM00490     
ProSiteProfilesPS51194  HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile.     

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