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Gene detail [Fasta]

Species Tribolium castaneum
GeneTCOGS2:TC009471
PositionChLG7:1390414..1397313[GBrowse]
sequence mRNA:
>TCOGS2:TC009471-RA
ATGGCCGCAAGTGATAGTAAAGCTCCACTTAGAACAGTGAAAAGAGTGCAGTTTGGCATTTTAAGTCCAGATGAAATACG
TCGTATGTCCGTCACTGAAGGGGGCATCCGTTTCCCCGAGACCATGGAAGCGGGTCGCCCCAAAATGGGGGGTCTCATGG
ACCCGAGACAGGGTGTCATCGATCGGCACTCCCGCTGCCAGACTTGTGCGGGCAACATGACCGAATGCCCTGGACATTTC
GGACACATCGACTTAGCCAAACCCGTTTTCCATGTGGGTTTTATCACAAAAACTATCAAGACGCTGCGGTGCGTTTGCTT
CTACTGCAGTAAATTGCTTGTGAGCCCCAATAATCCTAAAATTAAGGAAGTCGTAATGAAATCAAAGGGGCAACCTAGGA
AAAGATTAGCGTTTGTTTATGATCTCTGTAAAGGGAAGAACATTTGTGAGGGCGGGGATGAGATGGATGTGGGGAAAGAA
GGGGAAGACCCCAATCAAGCAAAGAAACAGGGACATGGTGGTTGTGGGCGCTACCAACCTAATATTAGAAGGACAGGGCT
TGATCTCACGGCAGAGTGGAAACACTTGAATGAAGACTCACAAGAACGCAAAATTGCCTTGTCGGCTGAAAGAGTTTGGG
AAATTCTCAAACATATCACAGATGAAGAGTGTTTTATCCTGGGCATGGACCCAAAATTCGCACGTCCTGATTGGATGATA
GTCACAGTGTTGCCAGTTCCGCCACTCCCAGTCCGCCCAGCTGTAGTAATGTACGGTTCGGCCCGAAATCAGGACGACTT
GACTCACAAATTAGCCGACATTATCAAAGCAAACAATGAATTACAGAAAAACGAAGCAGCTGGAGCTGCAGCACACGTAA
TCTCCGAAAATATAAAAATGTTACAATTCCATGTGGCAACACTGGTCGACAACGACATGCCGGGGATGCCCCGAGCAATG
CAAAAATCCGGTAAACCACTGAAAGCCATCAAATCGCGACTCAAAGGCAAAGAGGGCCGAATTCGAGGCAACTTGATGGG
TAAACGAGTGGATTTTTCCGCACGTACTGTTATCACACCTGATCCCAACTTGCGGATTGATCAAGTGGGCGTGCCGAGAA
GTATCGCCCAGAATTTAACGTTTCCAGAAATTGTGACACCGTTTAATTTTGATAAAATGTCAGAGCTGGTACAGAGAGGC
AATTCGCAATATCCGGGTGCCAAGTATATTATTCGTGACAATGGGGAGAGAATTGATTTGAGGTTTCACCCGAAATCTTC
CGATTTGCATTTACAGTGTGGTTATAAAGTCGAGAGACACATAAGAGATGGTGATTTAGTTATTTTCAACCGTCAACCCA
CCCTACATAAAATGAGTATGATGGGGCACAGAGTTAAGGTATTGCCTTGGTCAACATTCCGAATGAATTTATCATGTACT
TCCCCCTACAACGCCGACTTTGATGGCGACGAAATGAACCTTCACGTCCCTCAAAGTATGGAAACACGGGCCGAAGTTGA
AAACTTGCACATTACACCCAGACAAATTATCACCCCACAAGCCAATAAACCCGTTATGGGTATTGTACAGGACACCCTCA
CAGCTATTAGAAAAATGACAAAACGGGACGTTTTCATCGAGAAGGAGCAAATGATGAATTTGTTGATGTTTTTGCCGATT
TGGGATGGAAAAATGCCAAGACCTGCAATTTTGAAACCGAAACCGTTATGGACCGGAAAACAAATTTTCTCCCTAATTAT
CCCAGGAAATGTTAATATGATTCGAACACATTCTACACATCCTGATGATGAAGATGATGGGCCGAATAAATGGATTTCAC
CGGGTGATACTAAAGTTATGGTCGAACATGGAGAATTGGTTATGGGAATTTTGTGTAAGAGGACGTTGGGAACCTCGGCT
GGGTCTTTGCTACATATTTGTATGTTGGAGTTGGGACATGAGGTCTGTGGACGGTTTTATGGGAATATTCAGACGGTCGT
CAACAACTGGCTCCTGCTTGAAGGTCACAGTATCGGTATTGGTGACACCATTGCCGATCCGCAAACCTACTTAGAGATCC
AGAAAGCTATCAAAAAAGCCAAAGAGGATGTCATTGAAGTCATCCAAAAAGCACACAACATGGAACTTGAGCCAACACCC
GGTAACACGTTACGACAAACATTCGAAAATCAAGTCAATCGTATTCTTAATGACGCTCGTGACAAAACCGGTGGTTCGGC
TAAAAAATCTCTAACCGAATACAACAATCTTAAAGCTATGGTCGTATCCGGTTCCAAAGGTTCCAATATTAACATCTCCC
AAGTTATTGCCTGCGTAGGGCAACAAAACGTCGAAGGTAAACGAATACCTTTCGGCTTCCGCAAACGCACGCTCCCTCAC
TTCATCAAAGACGATTACGGTCCAGAATCCCGCGGTTTCGTCGAAAATTCATACTTGGCCGGTTTAACCCCATCCGAATT
TTATTTCCACGCTATGGGAGGTCGTGAAGGTCTTATTGACACAGCGGTTAAAACCGCCGAAACCGGTTACATCCAACGTC
GTCTAATCAAAGCTATGGAGTCGGTTATGGTACACTATGACGGAACTGTTCGTAACTCAGTCGGACAACTCATCCAGTTA
CGTTACGGTGAGGACGGTCTTTGTGGCGAAATGGTCGAATTTCAAACACTTCCAACTGTGAAACTATCAAATAAAGCGTT
CGAACGCAAATTTAGATTTGATCCAAGCAATGAACGGTATCTACGACGTGTTTTCACCGAGGAAGTGATCAAGGATTTGA
TGGGTTCAGGTGAAGTCATTTCCGAATTGGAAACAGAATGGGAACAACTACAAAAAGATCGCGAAGCCTTACGTCAGATT
TTCCCAAGTGGGGAGTCCAAAGTTGTGCTCCCATGCAACTTGCAACGAATGATTTGGAACGTACAGAAAATTTTCCATAT
TAATAAAAGGGCCCCCACTGATTTATCACCCTTACGGGTGATACAAGGTGTGCGCGAGTTGTTAAATAAATGTGTGATTG
TTGCTGGAGAAGACAGACTTTCCAAACAAGCAAACGAAAATGCAACATTGCTGTTCCAATGTTTGGTTCGATCGACTCTT
TGCACTAAATGTGTCTCAGAAGAATTTCGTTTAAGTACGGAAGCGTTTGAATGGTTGATTGGTGAGATTGAGACACGGTT
CCAGCAAGCACAAGTCAATCCTGGTGAAATGGTTGGAGCGTTAGCTGCACAATCACTTGGTGAGCCTGCGACTCAAATGA
CACTCAACACGTTTCATTTCGCCGGTGTTTCTTCAAAGAACGTAACGTTGGGTGTGCCCCGTTTGAAGGAAATCATCAAT
ATATCGAAAAAACCCAAAGCTCCGTCTTTGACTGTGTTTTTAACGGGTGCTGCGGCTCGAGATGCCGAAAAAGCCAAAAA
TGTTTTATGCCGACTTGAACATACAACATTGCGTAAGGTCACAGCAAATACGGCGATTTACTACGATCCTGATCCACAAA
ATACTGTGATTCCGGAGGATCAAGAGTTTGTTAATGTTTATTACGAAATGCCCGATTTTGATCCGACTCGCATTTCTCCG
TGGTTGTTACGTATCGAATTGGATAGGAAACGAATGACTGATAAGAAATTGACAATGGAACAAATCGCTGAAAAAATCAA
TGCTGGCTTTGGGGACGATTTAAACTGTATCTTTAACGATGATAACGCAGAGAAGTTGGTTTTGCGTATCAGGATTATGA
ACAGTGACGATGGGAAATTCGGAGATGGCGCTGATGAAGATGTGGATAAAATGGACGATGATATGTTCCTACGGTGTATT
GAAGCTAACATGTTGAGTGACATGACATTGCAAGGCATTGAAGCCATTTCAAAAGTCTACATGCATTTGCCACAAAACGA
TTCGAAAAAACGTATCGTGATCACAGAAACTGGGGAATTTAAAGCCATAGCTGAATGGTTACTAGAAACAGATGGTACAA
GCATGATGAAGGTTTTATCAGAACGTGACGTAGACCCAGTCCGGACGTTTTCTAACGACATTTGTGAAATTTTCTCAGTG
CTTGGCATCGAAGCCGTTCGTAAATCAGTCGAGAAGGAAATGAACGCTGTGTTACAATTCTACGGTCTATACGTAAACTA
TCGTCACCTTGCGTTGCTTTGTGACGTTATGACGGCAAAAGGTCACCTTATGGCGATTACACGTCATGGAATTAATAGGC
AAGATACCGGTGCGCTGATGAGGTGTTCATTTGAAGAAACTGTTGATGTTTTGATGGATGCAGCTTCACATGCTGAAGTT
GATCCAATGAGAGGTGTGTCGGAAAATATAATTATGGGTCAATTACCACGGATGGGTACTGGTTGTTTTGATTTGTTGCT
TGATGCCGAGAAATGTAAAATGGGTATTCCGATACCGCAAGCACATGGGGCTGATATTATGGCGTCGGGGATGTTCTTCG
GATCGGCGGCAACTCCAAGTATGAGTCCCGGGGCTGCGATGACGCCGTGGAATCAAGGGGCGACGCCCTACGTGGGCAGT
GCGTGGTCTCCACACAATTTAATGGGCAGTGGTATGACACCTGGAGGCCCAGCATTTTCACCTTCTGCCGCTTCCGACGC
TTCAGGAATGTCACCTGGTTACGGTGCTTGGTCGCCCACTCCTCAATCTCCCGCTATGTCACCATTTATGGCCTCACCTC
ATGGCCAATCTCCTTCTTACAGTCCTTCAAGTCCTTCATTCCAACCGACATCACCATCCATGACACCCGTTTCACCAGGT
TATTCCCCCACATCTCCCGGTTATTCCCCAACAAGTCCAAACTATAGTCCAACTTCTCCAAGTTATTCTCCGACAAGTCC
GAGTTATTCGCCCACGAGTCCAAGTTACTCACCCACAAGTCCGAGCTATTCACCCACAAGTCCGAGTTACTCACCTACAA
GTCCTAGTTATTCACCCACGAGTCCAAGTTACTCGCCCACAAGTCCAAGTTATTCCCCCACGAGTCCAAGTTACTCGCCC
ACAAGTCCGAGTTATTCACCCACGAGTCCAAGTTACTCACCTACAAGTCCGAGTTATTCACCCACGAGTCCGAGTTACTC
GCCTACGAGTCCTAGTTATTCACCCACGAGTCCAAGTTATAGTCCTACAAGTCCGAGTTATTCACCAACGAGTCCAAGTT
ACAGTCCTTCATCTCCACGTTATACTCCAGCGTCGCCAAGTTATTCGCCCACAAGTCCGAGTTACTCGCCGTCGTCACCA
CAGTACTCACCTGCGTCTCCAAGTTTTTCGCCTTCGTCGCCTAAATATTCACCCACGTCTCCGAGTTATTCGCCAACTTC
TCCTTCGTTTGCGGGTGGAAGTCCGCAATATTCGCCCACATCTCCGAGTTACTCGCCCACGTCTCCGAATTACTCACCGT
CGAGTCCGCAACATACACCAGCTGCAAGTTCGCGGTATTCGCCCTCGTCACCAAATTATTCACCAAGTTCGCCGAGTTAT
TCACCGACTTCTCCTCAATATTCACCACACAGTACAAAGTATTCACCCACTTCGCCTACTTACACACCGACTTCGCCAAG
TTATTCACCAGCTTCTCCGGCGTATTCGTCTCAACCTCCACGGTATTCACCGTCGAGTCCGAGCTATTCACCCACAAGTC
CCAGTCAGGATCAAGACTAG
PEP:
>TCOGS2:TC009471-PA
MAASDSKAPLRTVKRVQFGILSPDEIRRMSVTEGGIRFPETMEAGRPKMGGLMDPRQGVIDRHSRCQTCAGNMTECPGHF
GHIDLAKPVFHVGFITKTIKTLRCVCFYCSKLLVSPNNPKIKEVVMKSKGQPRKRLAFVYDLCKGKNICEGGDEMDVGKE
GEDPNQAKKQGHGGCGRYQPNIRRTGLDLTAEWKHLNEDSQERKIALSAERVWEILKHITDEECFILGMDPKFARPDWMI
VTVLPVPPLPVRPAVVMYGSARNQDDLTHKLADIIKANNELQKNEAAGAAAHVISENIKMLQFHVATLVDNDMPGMPRAM
QKSGKPLKAIKSRLKGKEGRIRGNLMGKRVDFSARTVITPDPNLRIDQVGVPRSIAQNLTFPEIVTPFNFDKMSELVQRG
NSQYPGAKYIIRDNGERIDLRFHPKSSDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCT
SPYNADFDGDEMNLHVPQSMETRAEVENLHITPRQIITPQANKPVMGIVQDTLTAIRKMTKRDVFIEKEQMMNLLMFLPI
WDGKMPRPAILKPKPLWTGKQIFSLIIPGNVNMIRTHSTHPDDEDDGPNKWISPGDTKVMVEHGELVMGILCKRTLGTSA
GSLLHICMLELGHEVCGRFYGNIQTVVNNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPTP
GNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQQNVEGKRIPFGFRKRTLPH
FIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQL
RYGEDGLCGEMVEFQTLPTVKLSNKAFERKFRFDPSNERYLRRVFTEEVIKDLMGSGEVISELETEWEQLQKDREALRQI
FPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPLRVIQGVRELLNKCVIVAGEDRLSKQANENATLLFQCLVRSTL
CTKCVSEEFRLSTEAFEWLIGEIETRFQQAQVNPGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIIN
ISKKPKAPSLTVFLTGAAARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIPEDQEFVNVYYEMPDFDPTRISP
WLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDGKFGDGADEDVDKMDDDMFLRCI
EANMLSDMTLQGIEAISKVYMHLPQNDSKKRIVITETGEFKAIAEWLLETDGTSMMKVLSERDVDPVRTFSNDICEIFSV
LGIEAVRKSVEKEMNAVLQFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHAEV
DPMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKMGIPIPQAHGADIMASGMFFGSAATPSMSPGAAMTPWNQGATPYVGS
AWSPHNLMGSGMTPGGPAFSPSAASDASGMSPGYGAWSPTPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPG
YSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSP
QYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSSPNYSPSSPSY
SPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPSQDQD
Swiss-ProtDNA-directed RNA polymerase II subunit RPB1
KEGG     K03006  RPB1, POLR2A; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]     
SUPERFAMILYSSF64484  beta and beta-prime subunits of DNA dependent RNA-polymerase superfamily     
Gene3DG3DSA:3.30.1490.180     
PfamPF00623  RNA_pol_Rpb1_2; RNA polymerase Rpb1, domain 2     
SMARTSM00663     
CoilsCoil
ProSitePatternsPS00115  RNA_POL_II_REPEAT; Eukaryotic RNA polymerase II heptapeptide repeat.     
OrthologiGroup-00947    DNA-directed RNA polymerase II subunit RPB1      

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