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Gene detail [Fasta]

Species Tribolium castaneum
GeneTCOGS2:TC002472
PositionChLG3:33779507..33801935[GBrowse]
sequence mRNA:
>TCOGS2:TC002472-RA
ATGTCCACCAATCCTCAGTGGAAATCCTTCCAGCCGCCCGACACCATGAATCAAGACTCTGCCATCATCGATTTCAAACC
AATGACCAGCAACGGCAAAGCATCTCAAGCATTTAATTTTACAAATCGCTCCACATCTAATTCACGGTTCGGGCAAGACT
TTCCTTTGCTGCAGGACAAGTCTTCATCATTCAGCAACGGTCTGTACGGATCATCAAGTACCACACATACAAATTCTCGG
TTTCCGATTGGTACGTTCTCGCTCGATTCGAATAACATGTTCAACAGCAGCGGAGACAGCACCATCACCAGCAACAACGT
TTTCTCCAACGGAAACAACAGCAGCTACAACGACTCCAATTCGTCGAATTTGGGCACCAGAGAAACGGGCATCATCGAAA
AGCTGCTGCATTCTTACGGATTCATCCAGTGCTGCGAACGACAGGCTCGTCTCTTTTTCCATTTTAGTCAGTTCAGTGGT
AATATTGAACATTTGAAAATTGGTGATCCGGTGGAATTTGAAATGACGTACGATAGACGAACCGGCAAACCGATAGCGAG
CGCCGTTACAAAAATAGCACCGGAAGTAGTTATGAGCGAAGAAAGGGTAACCGGAACGGTTACAACCGAACTTCGAGGTG
AAGGCTCCGGTGGAGATTCAACAGGAAGGATTAGTTATGAAAATCGAGGTGAATGTTTCTTTCTACCCTACACCAAAGAC
GACGTCGAAGGCAATGTTACGTTGAGAGCTGGCGATAAAGTCAGCTTCCAAATAGCGACGAATAACAGGGGCAACTTGGG
GGCATGCCACGTGCGTCTCGAGAACCCAGCCCACCCAGTAAAATACCAAGGCGTCGTATGTTCAATGAAAGAAAGTTTCG
GTTTCATCGAACGCGCCGACGTCGTCAAAGAGATCTTCTTTCACTTTTCCGAAGCCAAGACCAAAGAGGAATTACGCTTA
GGCGACGACGTCGAATTCACCATTCAAACGCGCAACGGTAAAGAAGTCGCCTGTAACATAACCCGTCTACCTTCCGGCAC
CGTCATCTTCGAGGACCTCAAACCGGAAATCCTCAAAGGCCAGGTGCTGAAGCCGCTAGATCGGGGCCCCAATGCACGCC
ACCAAACGGACGCCCTCCCGGGGCGCATCCGCTACCGGGCCCCCGACCACTCCGAAGTGGAGATCTCCTTCGGAGACAAG
GACCAACGTGGGGACTTCACGCTGCGTCATGGTGATTGGGTGCAGTTTAAAATCGCAACGGATCGTCGAGATGGACTCAA
TAGAGCGACGCATATTTCGCTTTTGGACGAGAGTTTTCTGGTGTCGGGCGAGAAGCGGGAGCAAGGAGTTGTGGCATCGG
TGAAGGAGGGGTTCGGGTTTTTGAAATGTGTGGAACGTGAGGCTCGATTGTTTTTCCATTTCAATGAAATACTGGATGTG
GATAGAGAAGTGGTGGTGAATGACGAGTACGAGTTTACTGTCGTTCAGGATCAGACCAGTACGTTTTCGAATAATCGACA
AAGTGCCATTAGAATGAAGTGGTTGCCGCATGGAAGCGTGCAGTTTGAGACGAGAGTTGAGAATAATTTGACGGGGACTG
TTTTTAAGGAGATACCGACGACGACGTGGTTGAATCGAAGTCCCACGAAGAATCAGAATGGAGAACATGCTCCCGAATCG
GGGTTGATCACTTATCAAGTGAACGGAGTCAAAAAGACTTTACCATTCTATTCGAAAGATTGTGATATGAAGCATTACCC
GAGGCTTGGAGATAAGGTCGAATTTAACGTAAATCAGGTGAAGAGAAACAAAGAATTAATAGCAGTTGACATTCAAGTGG
TGCAACCCGCTACACAAACCAACGGAATTAAACATAGAACTAGCAACAATTGTCAAATATACCAAGGTTTCATAGCAGCG
TTGAAAGACGGTTTTGGATTCATCGAAACTACTCAACATGATAAAGAAGTCTTTTTCCATTTTAGTAATTTCGAAGGCGA
GCCCAACAGTCTTGAACTGGGCCAAGAAGTTGAATACAATTTGGGTAGTCGCGGCAATTCGGGCACGTGTTCTTCAGCCG
AAAACGTTAAAATTATTCCGAAAGGTACGATAAATCTACCGCCTGTCATTGGCGATGTTTTGGACGGAACAGTAGTCCGT
CCTTTACGTTCGGTAAATCCCGATCAAACGGAATACTCCGGACTTATTCGAATAAAAACGGAAGATCCCGAAGAGAAAGC
ACTGGAATATGAGTTTGGAATAATGGGACTTGTCAATAAACGCGAATTGTTACAAGTGGGTGACCATGTACAATTACAAG
TGGATTCAACAGGCAGGGCTGCCAACATTGTTGCTGTACGAAAGAAACTACGAGCAACGGTAGATGCAATCAAAGGTCAT
TTCGGTTTTTTGGCTTATGAAGTGGAAGAGGGCAAAAAGTTGTTCTTCCACATGACGGAAGTTAAGGATAATGTTAATTT
ACAAGTTGGCGATACTGTCGAGTTTGTGCTTGTGACCAATCATAGGAGTGGAAAGTCGTCGGCTTGTAGTGTGGTGAAAG
TCAGCGATGTGCAAGCGCGTCCAGAGCGGTTAATCAGCCGTCTGCGTACCGTGTCTGTGGACGATGCGGGCCCCAAATTG
ACGGTTTTGCGTCAACCGAAAGGCCCCGATGGCTCCAAAGGTTTCTCATCCGAGGCACGTATCGTACGTCTGCCAGGAAT
CGTCGTCGAATAG
PEP:
>TCOGS2:TC002472-PA
MSTNPQWKSFQPPDTMNQDSAIIDFKPMTSNGKASQAFNFTNRSTSNSRFGQDFPLLQDKSSSFSNGLYGSSSTTHTNSR
FPIGTFSLDSNNMFNSSGDSTITSNNVFSNGNNSSYNDSNSSNLGTRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSG
NIEHLKIGDPVEFEMTYDRRTGKPIASAVTKIAPEVVMSEERVTGTVTTELRGEGSGGDSTGRISYENRGECFFLPYTKD
DVEGNVTLRAGDKVSFQIATNNRGNLGACHVRLENPAHPVKYQGVVCSMKESFGFIERADVVKEIFFHFSEAKTKEELRL
GDDVEFTIQTRNGKEVACNITRLPSGTVIFEDLKPEILKGQVLKPLDRGPNARHQTDALPGRIRYRAPDHSEVEISFGDK
DQRGDFTLRHGDWVQFKIATDRRDGLNRATHISLLDESFLVSGEKREQGVVASVKEGFGFLKCVEREARLFFHFNEILDV
DREVVVNDEYEFTVVQDQTSTFSNNRQSAIRMKWLPHGSVQFETRVENNLTGTVFKEIPTTTWLNRSPTKNQNGEHAPES
GLITYQVNGVKKTLPFYSKDCDMKHYPRLGDKVEFNVNQVKRNKELIAVDIQVVQPATQTNGIKHRTSNNCQIYQGFIAA
LKDGFGFIETTQHDKEVFFHFSNFEGEPNSLELGQEVEYNLGSRGNSGTCSSAENVKIIPKGTINLPPVIGDVLDGTVVR
PLRSVNPDQTEYSGLIRIKTEDPEEKALEYEFGIMGLVNKRELLQVGDHVQLQVDSTGRAANIVAVRKKLRATVDAIKGH
FGFLAYEVEEGKKLFFHMTEVKDNVNLQVGDTVEFVLVTNHRSGKSSACSVVKVSDVQARPERLISRLRTVSVDDAGPKL
TVLRQPKGPDGSKGFSSEARIVRLPGIVVE
Swiss-ProtCold shock domain-containing protein E1
SUPERFAMILYSSF50249  Nucleic acid-binding proteins superfamily     
Gene3DG3DSA:2.40.50.140     
PfamPF00313  CSD; 'Cold-shock' DNA-binding domain     
SMARTSM00357     
ProSitePatternsPS00352  COLD_SHOCK; 'Cold-shock' domain signature.     
OrthologiGroup-00655    Cold shock domain-containing protein E1      

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