Gene detail [Fasta]

Species Tribolium castaneum
GeneTCOGS2:TC003361
PositionChLG3:3211968..3234459[GBrowse]
sequence mRNA:
>TCOGS2:TC003361-RA
ATGAATAAAAAGAAAGCCCAAACTCGCACTAGTGCTGCAGTTCATAATTTTGTTTTGTACGCTTTCCGAATTCAAAAGGA
GTTGAAACTCCAGTGGAAGCAAATTGCGCCGCCGTCGTCCGTCGAAATTTTGGACCATCGGCATAATTCCAAGATTGAAA
TAAAGGAAAATCAAGAGTTTCATCTTGAATGCAGGGTTCGGAACGCCAAACCCGCCGCCAAAATCGTTTGGTACAGAGGA
AACGTGGAACTAAATATACCCGATCGCGAGGACCAAATAATTGAGGTCCCCGGCAAAAACGGCGACAAAAGGGTCACCAG
ATACGACACGCACTCCCGTATCTCTTTGAAGCCAACAGCTGAGGATGATTACGCGGAATACACGTGCGAAGCGCGCCACG
AAGCGTTATCCCCCGACATCCCGTTACGAACAACCGTACAGTTGAGCGTTTTCTATCCGCCGGGCCCGCCCTACATCGAG
GGCTACACGGAAGGCGAGACCATCCGCCGCGGCCAGACCGTGGAGCTGGTGTGCCGCAGTCGGGGCGGCAATCCCCCGGC
CCAGCTCATCTGGTACAAAAACGGGGAGCAGATCCGCATGGCCTACAGGACGGCGGGCCGCGTGTCCGAGAACGTCTACA
CGTTCACGGCCGACGCCAGCGACAACAAGGCGCGCTACAAGTGCGAGGCGAGCAACATCATGTCCAAGGCGCCCCTCAAA
GCCGAAGTGGATATGACGGTGCTATTTTCGCCGGCACATGTCACCATATCAGGGCCGACCGAAGCCAGGGTTGGCGATCC
GGTGCCTCTCACTTGCACGACCGCAAACTCCAATCCGCCCGCTGAAATTAAATGGATGGTGGCCGGCAGGCAGGTTAGAA
ATGCCACCTCCAGGACGGTCGTCTCCCCGGAAGGAGGCTGGATTACAACTTCGAACATCACAGCCGTTGTTGAACCGAAT
CGGAGAAGTTTGGTCGTGATTTGTCACGGACTGAACATGCAATTAACCGAAAATGTTGTCTCGACGCATACTATCAACGT
TTTATATCCACCAAGTGCCCCTTTTATCCACGGCTACACGCAGGGCTCGTACATCCCTGCCGGAACCGTTCAAAAAATCT
CCTGCACCTCATCCGGGGGCAACCCCTTAGCCACCCTAACGTGGTACAAGAACGACAAAAAGATAAATTCAGTGTTGAAA
ACGACGGACAAGTCAGTAACTGCAGAAATAACAATTCTGACAAATGTAACCGATAATGAGGCGCGATATCGGTGCGAAGC
AGCAAACTCAGCTACTGAAATCCCGCTCTTCGAAACGATAACAATGAATGTTTACTTTCCACCTGATCACGTGAAAATTC
GTAAAGAACCGCTTGAACTGAAACCGAACGAGCAAGCGACTCTAACTTGCGACTCGAGCTCGAGCAATCCTCCAGCGAAA
TTATCGTGGTGGCGTGAGGGCATCCCAGTCCAAGGTCTCCTCAATACGACCAAACCCGGGCTTCATGGGGGCACAGTTTC
CAGTATTGAGCTCAAACTCAACATCACGGAACAACTCAATGGGATTGTTTACACGTGTCAAGCCACGAATGAGGCGCTGC
AACGCTCGGTCCATGACGCCATCACCCTGCAAGTTTTATATAAGCCCGTCTTCGACAAAGATAACGAAGAAGCGGTCACG
GGCATAGAAGGCGAGCCATTAATAATCACGTTAAAAGCAGACGGCAATCCGCAGAACATCGCCTACACCTGGACAAAGGA
CGGCCTCCCGATTATCCAATCGTCCTCGAGTTCGGGCATCGAGAGGATTATCTCCGACGGTCCGGTTTTAAATATAACCA
GATTAAGCCGCCACGACGCTGGAACCTACTCTTGCGAAGCCCTGAACTCGCAGGGCAGTTCAGTGGCCCAAGTTAACATC
ACCGTCCAATACGCAGCGACAATCGTCGCCACGAGCGAAAATGTCGTCGTGAATCCCAATGAGGACGCGACGCTTTCCTG
CACAGCGGACGGGAATCCGCTGTCTGATGACACAATTACGTGGAAAAGGGACGATTTTCCGGATTTTGACGCGCGCACCT
CCGTTATGTACGATAAAAACGGGACGTCGTATCTGCGGATAACTGATGTTACAAGGGACGATTTGGGGAACTTTCAATGC
ATCGTCAACAACGGCGTGGGAAATGTCACCACGAAAGAAGTGATGCTCATTGTCAAGCATAAACCCGAAATTGATCAGCA
TCCGGCTCTTCTTAAATTTGCAAGTGATGCGGGCGACACCGGGAGAGTGGTTTGCCGGAGCCAGGCCTCGCCTTTGGCCA
AGTACAAATGGGCTAGGTCGGGGGCGCCCATCACGGCTAATACCACCGGGAAATACTACACCACCTACAGACAGATCGAC
GCTCTTACATCGGAATCCGTCCTGTTCATCACCCATGTGACCTCCTCCGACTACGGCAACTACGAATGCGTTGCCCGCAA
CGAATTGGGATTTGCGACCGCTTCTCCTCGCCTTGAAGTAACTTCTGCTCCAGATACTCCCACACTGCTGACAATCCTAA
ACGTGACTCATGATACCGTTACGTTAGGATGGACACCTGGTTTTGATGGAGGCATGAAAGCCGCTTATCGCATTAGATAC
AGACAAGTAAACGATGATGGCTATAAGTACGTGGACGTCGTGCCACAGAACGCCACTTCTTTCCTGATACGAGATTTGGA
AGTTAACACACAATACGTGTTCTCCATTATGGCGATGAATAAATTAGGCAACAGCAAGTACATGCCCGATCTTTTATCAG
CCCGGACGTCAATGTACAGCGACCACATTGAGAAGATTATCCCCGAGGATTTGCTCGAGAAGCAAGACTTGCCCAGAATT
GTTATTATTAGTGTTTCTGTTATTGGTATTTTCCTTTTGATTGTCAACATCGGACTTGTTGCCGGTTGCATGCTAAAGCG
ACGAGCTAAGCGAATACGAGAACAAAGTAACCAAACGAGCAAATCAGCAACCATCGAAATGTACGCCCCCAGCAGCTACA
ACGACACGGTCACTGGAGAGACCTTATCTTCGGTTAGCGAGAAAAGTGAGACTTATAGCAACGAAGGAAGCAACAACGAT
TACGTCGATGAAGGGCGCAAGCAAGCAACGAGCACTTATCTAATGGACCAGCAGGACTACCCAGGTGCGTACCCAGTGTG
TCCCAGTTACGAGCTTCAGATGCAACCTAACATGGCTCACAAAACTCACACTCTTCCTCATCCTCATCATCACCACCAGC
ATCACATGCATGATAGGAACAGAGCTAGAGATGACCAGAGTCTTGCCTATCATGGCACGATGTCAGCGAAATCGTCGTAC
GTGAGCGCGCCCTCGCCAGCGCCCCCAGCCGACGGTTCATACTACAACATGTCCGACCGCTACTTGTCATATCCGCCGCC
GCTGGACTTCCAGAATCCGCCCCCGATTCCGGCGCACCCCCACATGGGGCACATGCACAACCCGGTGACGCCGCCCCTGC
CCGCCAACGGCTCCCTGCTGCGCCACCAGCGAGGGGCCGTTCCGCCCGACGTCCTGCACAACACCAGCCAAAACCCCCAA
ATACTCCAAGCTCAAACTCTCGCTCAAAAGCGGGAGCTCACCAGTTTTGGCAACGGTTACGGTGTTAACGAACAGGAAGG
ACATCTTGTCTGA
PEP:
>TCOGS2:TC003361-PA
MNKKKAQTRTSAAVHNFVLYAFRIQKELKLQWKQIAPPSSVEILDHRHNSKIEIKENQEFHLECRVRNAKPAAKIVWYRG
NVELNIPDREDQIIEVPGKNGDKRVTRYDTHSRISLKPTAEDDYAEYTCEARHEALSPDIPLRTTVQLSVFYPPGPPYIE
GYTEGETIRRGQTVELVCRSRGGNPPAQLIWYKNGEQIRMAYRTAGRVSENVYTFTADASDNKARYKCEASNIMSKAPLK
AEVDMTVLFSPAHVTISGPTEARVGDPVPLTCTTANSNPPAEIKWMVAGRQVRNATSRTVVSPEGGWITTSNITAVVEPN
RRSLVVICHGLNMQLTENVVSTHTINVLYPPSAPFIHGYTQGSYIPAGTVQKISCTSSGGNPLATLTWYKNDKKINSVLK
TTDKSVTAEITILTNVTDNEARYRCEAANSATEIPLFETITMNVYFPPDHVKIRKEPLELKPNEQATLTCDSSSSNPPAK
LSWWREGIPVQGLLNTTKPGLHGGTVSSIELKLNITEQLNGIVYTCQATNEALQRSVHDAITLQVLYKPVFDKDNEEAVT
GIEGEPLIITLKADGNPQNIAYTWTKDGLPIIQSSSSSGIERIISDGPVLNITRLSRHDAGTYSCEALNSQGSSVAQVNI
TVQYAATIVATSENVVVNPNEDATLSCTADGNPLSDDTITWKRDDFPDFDARTSVMYDKNGTSYLRITDVTRDDLGNFQC
IVNNGVGNVTTKEVMLIVKHKPEIDQHPALLKFASDAGDTGRVVCRSQASPLAKYKWARSGAPITANTTGKYYTTYRQID
ALTSESVLFITHVTSSDYGNYECVARNELGFATASPRLEVTSAPDTPTLLTILNVTHDTVTLGWTPGFDGGMKAAYRIRY
RQVNDDGYKYVDVVPQNATSFLIRDLEVNTQYVFSIMAMNKLGNSKYMPDLLSARTSMYSDHIEKIIPEDLLEKQDLPRI
VIISVSVIGIFLLIVNIGLVAGCMLKRRAKRIREQSNQTSKSATIEMYAPSSYNDTVTGETLSSVSEKSETYSNEGSNND
YVDEGRKQATSTYLMDQQDYPGAYPVCPSYELQMQPNMAHKTHTLPHPHHHHQHHMHDRNRARDDQSLAYHGTMSAKSSY
VSAPSPAPPADGSYYNMSDRYLSYPPPLDFQNPPPIPAHPHMGHMHNPVTPPLPANGSLLRHQRGAVPPDVLHNTSQNPQ
ILQAQTLAQKRELTSFGNGYGVNEQEGHLV
Swiss-ProtNephrin
SUPERFAMILYSSF48726  Immunoglobulin superfamily     
Gene3DG3DSA:2.60.40.10     
PfamPF07679  I-set; Immunoglobulin I-set domain     
SMARTSM00060     
ProSiteProfilesPS50853  FN3; Fibronectin type-III domain profile.     
ProSitePatternsPS00290  IG_MHC; Immunoglobulins and major histocompatibility complex proteins signature.     
OrthologiGroup-00262    iGroup-00262     

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