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Gene detail [Fasta]

Species Anopheles gambiae
GeneAGAP004937
Position2L:6213696..6218142[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/AGAP004937
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/AGAP004937
sequence mRNA: 
>AGAP004937-RA
CAAACGAAACCTTTTCGTTCTGCCGATGGTAAGTCTTCATTTATGGATTATGTTGCGTACGGCCAGCGCAGCGATGTGTT
CTACAGCGGCCAAACGAACCAACCGTCTGCTCCCCGGCAATCTATAAACCCATCGAATGTTTTCCCACCGATCGGTACGT
TTAGCATTGAAGCGACTACGATGGCAGCTCCGAATCAAGGTGTTTTCGGTGGTGGCGATGCCATGAGCGTGATGGGCAAT
ACCGGCACGACGGGCACTATCGGAGTGTTCAATGCTAACGCCATGATGAGCGTTCCGAACAACATGAACAGTGCGAACAA
TTCGTACTCGTCCGGCCAGAACACGAATGGTGTCGACGCTAGCCAGGGAACGCGCGAGACTGGCATCATTGAAAAATTGC
TGCATTCGTACGGGTTTATCCAGTGCTGTGAGCGACAGGCTCGACTCTTCTTCCACTTCTCGCAGTTCGGTGGCAATATC
GAGCATCTGAAGATTGGCGATCCAGTGGAGTTTGAAATGACGTACGACAGACGTACCGGGAAACCGATCGCTAGCCAGGT
GACGAAGATCGCCCCGGAGGTAGTATTGTCCGAGGAGCGCGTTACCGGCACCGTTACGACCGAGCTGAAGTGCGACTCCG
CCCCTTCGGGAAGCAATACGAGCTCTTCCACCTCGAGCGACACTACGACCGGGCGCATTAGCTATGAGAACCGGGGCGAA
TGCTTCTTCCTACCGTATACCAAAGATGATGTCGAAGGAAACGTTTCGCTACGTTCGGGTGACAAGGTTAGCTTTCAAAT
AGCTACGAATCAAAGAGGTAACCTCGGTGCTTGTCACATCCGGCTGGAAAACCCGGCACACCCGGTAAAGTATCGCGGTG
TCGTCTGCTCTATGAAAGACACATTCGGCTTTATCGAGCGGGCCGATGTGGTGAAAGAGATCTTTTTCCATTTCTCGGAA
GCGGATAACACTATCGAACTTCGTCCTGGCGACGATGTTGAATTTATTATCCAAACCAGAAATGTAAGTGGGAAAGAAGT
GGCATGCAATATTGCTCGTTTGCCACCGGGATCGGTAATCTTCGAGGATGTCGATACGACCATCTACAAGGGACAGGTGC
TGAAGCCACTTGATCGCAATAATCCGGCACGTCAGCAGACAAACGATCCGCTGCCGGGGCGCATTCGCTACCGTGCAGCC
GACCACTCGGAGGTAGAAGTGCCATTCGGAGACAAGGATCAGAAAGGAGACTACACGCTGCGTCACGGAGACTGGGTACA
GTTTTTGCTGGCGACCGATCGCCGCGATCAGTTGCAACGGGCCACATCCATTTCCCTGCTCGACGAAACATTCCAAGTGA
GCGGTGAAAAGCGTGAGCAAGGCGTTGTCGCATCGTTAAAGGAAGGCTTTGGCTTTCTGCGCTGCGTCGAGCGAAGCGTT
CGTCTATTTTTCCATTTTACTGAAGTGCTAGATACGAGCCGTGAAATTTGCGTCGATGACGAGGTTGAATTTACCGTCAT
TCAAGATCCTGGATCGAGCTTTGCTAACAACCGCCAAAGCGCTATCCGTATCAAACATTTGCCCATTGGTACGGTTAAGT
TTGAAACTCTGATCGAGAGCAACGTTGAAGGCGTCGTATCCCGCGAGGCGCCTAAAAGTCCTATCAAATCACAGGAACGC
ACCGAGGGCGGCGTCATAACATACGGCCAAGGTCCAAACAAAAAGACTATAATGTATTTCTTGAAAGATTGTGATAAGCC
ACCGCGTGTGGGTGATAAAGTCAGATTCAATATTTGTCAGGTAAAACGTAACAAAGAATTGATCGCAACGAACATTGTGG
AGATCACTTCTAACACGCATCAAGCTCTGCAACAGCCGCAACTATTGCATCAACAACCCATGCAGCAGCAATTGCAGCAA
TCTCCCATTGCTGTTGATACGCAGCTAACGGTTGGAACGGTTCAATCGTCACAATCGCCTACGTCTGGCCTTAGCAATGG
GTCTAGAGCGAATGGTAATTCGGTATTGAAGTCTAACTATACCAATGGCAATATTAAGCCAGGCAAAATTCACCATGGAT
TCATTGCGGTCTTGAAGGAAAATTTCGGTTTCATTGAAACGGTCGAGCACGACCAGGAAGTATTTTTCCACTTCAGCAAC
TTTGTCGGCAATAGCAATACATTGGAGTTGGGACATGAAGTAGAATATACGCTCTCTACCCGTAATGCCATCAATGCGGG
CAACTGCATTCCGGCAGAGAACGTTAAAGTGCTACCGAAAGGAACGATTCAGCAACCGAAAGTTTTACCCTCTAGCTTCA
ATGGATCCGTTCTGCGTCCGTTGCGCTGCATCAATCCGGAACAGGTCGAATACAGTGGTTTGGTGCAGGTGAAGAACGAG
CACGGCGATACATTGTCGACCCACGAGTTTGGTATTACCAGTCTAAAGAATCATCGCGATCTGCTGCAGAAGGATGATGT
AGTAACATTCAAGATCGACGAGCTAAATCGTGCAATGGAGATTGCTCCCGTTCGTACCAAAAAGCAAGCCAAGGTAGATT
CAATTAAGGGACAGTTCGGATTTTTGGATTTCGAAGTGGACGAAGGGAAAAAGTTGTTTTTCCACATGTCCGATGTTCAA
GGCAACGTAAATCTCTATCTCGGAGATACGGTGGAGTTTTCCATCGTTACTAATCAGGCAAGTCGGAATGGTAAAACCTC
TGCATGCAACGTTGTTAAAATAAACGATGCGAATGGACCGCGGCCCGAACGACTGATTTCCCGCATCAAGCTAAACTCCG
TAGACGATAGTGGACCACGTCTAACTGTCATTCGTGCACCGAAAGGGCCGGACGGTACGAAAGGCTTCCATGCATCTGCC
AGAACTCCTCGTTTAGTTGGTATATATCCAGCAAATGAATAATAAGTAACGAAAACGAAATTAGCAGATTGTAATAAAAT
TATACCAATTACTCTTCATTTTTACTCAGTTTCATGTTTGTATTTCGGTTTCATTG
PEP: 
>AGAP004937-PA
MDYVAYGQRSDVFYSGQTNQPSAPRQSINPSNVFPPIGTFSIEATTMAAPNQGVFGGGDAMSVMGNTGTTGTIGVFNANA
MMSVPNNMNSANNSYSSGQNTNGVDASQGTRETGIIEKLLHSYGFIQCCERQARLFFHFSQFGGNIEHLKIGDPVEFEMT
YDRRTGKPIASQVTKIAPEVVLSEERVTGTVTTELKCDSAPSGSNTSSSTSSDTTTGRISYENRGECFFLPYTKDDVEGN
VSLRSGDKVSFQIATNQRGNLGACHIRLENPAHPVKYRGVVCSMKDTFGFIERADVVKEIFFHFSEADNTIELRPGDDVE
FIIQTRNVSGKEVACNIARLPPGSVIFEDVDTTIYKGQVLKPLDRNNPARQQTNDPLPGRIRYRAADHSEVEVPFGDKDQ
KGDYTLRHGDWVQFLLATDRRDQLQRATSISLLDETFQVSGEKREQGVVASLKEGFGFLRCVERSVRLFFHFTEVLDTSR
EICVDDEVEFTVIQDPGSSFANNRQSAIRIKHLPIGTVKFETLIESNVEGVVSREAPKSPIKSQERTEGGVITYGQGPNK
KTIMYFLKDCDKPPRVGDKVRFNICQVKRNKELIATNIVEITSNTHQALQQPQLLHQQPMQQQLQQSPIAVDTQLTVGTV
QSSQSPTSGLSNGSRANGNSVLKSNYTNGNIKPGKIHHGFIAVLKENFGFIETVEHDQEVFFHFSNFVGNSNTLELGHEV
EYTLSTRNAINAGNCIPAENVKVLPKGTIQQPKVLPSSFNGSVLRPLRCINPEQVEYSGLVQVKNEHGDTLSTHEFGITS
LKNHRDLLQKDDVVTFKIDELNRAMEIAPVRTKKQAKVDSIKGQFGFLDFEVDEGKKLFFHMSDVQGNVNLYLGDTVEFS
IVTNQASRNGKTSACNVVKINDANGPRPERLISRIKLNSVDDSGPRLTVIRAPKGPDGTKGFHASARTPRLVGIYPANE
Swiss-ProtCold shock domain-containing protein E1
SUPERFAMILYSSF50249  Nucleic acid-binding proteins superfamily     
Gene3DG3DSA:2.40.50.140     
PfamPF12901  SUZ-C; SUZ-C motif     
SMARTSM00357     
ProSitePatternsPS00352  COLD_SHOCK; 'Cold-shock' domain signature.     
PANTHERPTHR12913

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